File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 116712ms, 91.78% of 127168ms total Dropped 1175 nodes (cum <= 635.84ms) flat flat% sum% cum cum% 0 0% 0% 127155ms 100% __libc_start_call_main 0 0% 0% 127155ms 100% __libc_start_main_impl 0 0% 0% 127155ms 100% _start 0 0% 0% 127152ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 127152ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 127152ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 127152ms 100% main 0 0% 0% 127110ms 100% CxxTest::RealTestDescription::run 0 0% 0% 127110ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 127110ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 127110ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 127110ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 127109ms 100% AbstractConvergenceTester::Converge 4ms 0.0031% 0.0031% 125938ms 99.03% AbstractCardiacProblem::Solve 11ms 0.0086% 0.012% 125152ms 98.41% AbstractDynamicLinearPdeSolver::Solve 3ms 0.0024% 0.014% 68626ms 53.96% LinearSystem::Solve 2ms 0.0016% 0.016% 68123ms 53.57% KSPSolve 14ms 0.011% 0.027% 68122ms 53.57% KSPSolve_Private 12ms 0.0094% 0.036% 67778ms 53.30% KSPSolve_SYMMLQ 463ms 0.36% 0.4% 47258ms 37.16% AbstractCardiacTissue::SolveCellSystems 5ms 0.0039% 0.4% 39464ms 31.03% PCApply 6ms 0.0047% 0.41% 39448ms 31.02% PCApply_BJacobi_Singleblock 3ms 0.0024% 0.41% 37180ms 29.24% KSPSolve_PREONLY (partial-inline) 910ms 0.72% 1.13% 36629ms 28.80% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 4ms 0.0031% 1.13% 36077ms 28.37% PCApply_ICC 4ms 0.0031% 1.13% 36073ms 28.37% MatSolve 35618ms 28.01% 29.14% 36069ms 28.36% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 2ms 0.0016% 29.14% 33937ms 26.69% KSP_PCApply.lto_priv.18 7649ms 6.01% 35.16% 32434ms 25.50% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 11ms 0.0086% 35.17% 22887ms 18.00% MatMult 288ms 0.23% 35.39% 22876ms 17.99% MatMult_SeqAIJ (partial-inline) 22370ms 17.59% 52.98% 22874ms 17.99% MatMult_SeqAIJ_Inode (inline) 2340ms 1.84% 54.82% 16895ms 13.29% CardiacNewtonSolver::Solve 5469ms 4.30% 59.12% 9952ms 7.83% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1559ms 1.23% 60.35% 9273ms 7.29% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 205ms 0.16% 60.51% 9268ms 7.29% AbstractCardiacTissue::UpdateCaches (inline) 1691ms 1.33% 61.84% 8685ms 6.83% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1218ms 0.96% 62.80% 8103ms 6.37% BidomainSolver::SetupLinearSystem 7428ms 5.84% 68.64% 7428ms 5.84% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 1ms 0.00079% 68.64% 7418ms 5.83% KSP_PCApply (partial-inline) 8ms 0.0063% 68.65% 6961ms 5.47% KSPConvergedDefault 4201ms 3.30% 71.95% 4294ms 3.38% __ieee754_log_fma 0 0% 71.95% 4128ms 3.25% boost::numeric::ublas::norm_inf (inline) 2836ms 2.23% 74.18% 4128ms 3.25% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.18% 4128ms 3.25% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.18% 4128ms 3.25% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 30ms 0.024% 74.20% 3406ms 2.68% std::pow (inline) 3372ms 2.65% 76.86% 3372ms 2.65% ddot_ 401ms 0.32% 77.17% 3361ms 2.64% __pow 9ms 0.0071% 77.18% 3193ms 2.51% MatNullSpaceRemove 1989ms 1.56% 78.74% 3059ms 2.41% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 405ms 0.32% 79.06% 2929ms 2.30% __ieee754_pow_fma 5ms 0.0039% 79.07% 2741ms 2.16% VecDot 0 0% 79.07% 2736ms 2.15% VecDot_Seq 0 0% 79.07% 2736ms 2.15% VecXDot_Seq_Private.constprop.0 2728ms 2.15% 81.21% 2728ms 2.15% __memcpy_avx_unaligned_erms 0 0% 81.21% 2695ms 2.12% PetscMemcpy (inline) 25ms 0.02% 81.23% 2268ms 1.78% VecCopy 2ms 0.0016% 81.23% 2241ms 1.76% VecCopy_Seq (partial-inline) 10ms 0.0079% 81.24% 2077ms 1.63% VecAXPY 3ms 0.0024% 81.24% 2067ms 1.63% VecAXPY_Seq 2052ms 1.61% 82.86% 2052ms 1.61% daxpy_ 4ms 0.0031% 82.86% 2008ms 1.58% VecMDot 10ms 0.0079% 82.87% 2004ms 1.58% VecMXDot_Private 0 0% 82.87% 1989ms 1.56% AbstractFeVolumeIntegralAssembler::DoAssemble 1984ms 1.56% 84.43% 1988ms 1.56% VecMDot_Seq 19ms 0.015% 84.44% 1651ms 1.30% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1565ms 1.23% 85.67% 1629ms 1.28% exp_inline (inline) 0 0% 85.67% 1383ms 1.09% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 85.67% 1279ms 1.01% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.67% 1279ms 1.01% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.67% 1279ms 1.01% boost_numeric_ublas_abs (inline) 1279ms 1.01% 86.68% 1279ms 1.01% std::abs (inline) 9ms 0.0071% 86.69% 1176ms 0.92% VecMAXPY 1160ms 0.91% 87.60% 1167ms 0.92% VecMAXPY_Seq 8ms 0.0063% 87.60% 1092ms 0.86% boost::numeric::ublas::matrix_assign (inline) 232ms 0.18% 87.79% 1078ms 0.85% boost::numeric::ublas::indexing_matrix_assign 688ms 0.54% 88.33% 1026ms 0.81% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.33% 1013ms 0.8% CuboidMeshConstructor::Construct 0 0% 88.33% 1012ms 0.8% AbstractTetrahedralMesh::ConstructRegularSlabMesh 3ms 0.0024% 88.33% 1012ms 0.8% DistributedTetrahedralMesh::ConstructCuboid 978ms 0.77% 89.10% 978ms 0.77% [libchaste_heart.so] 1ms 0.00079% 89.10% 956ms 0.75% KSP_RemoveNullSpace (inline) 2ms 0.0016% 89.10% 912ms 0.72% Element::Element 1ms 0.00079% 89.10% 910ms 0.72% VecNorm 2ms 0.0016% 89.10% 904ms 0.71% VecNorm_Seq 8ms 0.0063% 89.11% 890ms 0.7% BidomainAssembler::ComputeMatrixTerm 2ms 0.0016% 89.11% 883ms 0.69% AbstractTetrahedralElement::CalculateJacobian 859ms 0.68% 89.79% 859ms 0.68% log_inline (inline) 2ms 0.0016% 89.79% 844ms 0.66% AbstractTetrahedralElement::AbstractTetrahedralElement 1ms 0.00079% 89.79% 812ms 0.64% AbstractBidomainSolver::FinaliseLinearSystem 239ms 0.19% 89.98% 811ms 0.64% AbstractBidomainSolver::CheckCompatibilityCondition 6ms 0.0047% 89.98% 811ms 0.64% boost::numeric::ublas::c_matrix::c_matrix (inline) 5ms 0.0039% 89.99% 787ms 0.62% VecScale 2ms 0.0016% 89.99% 782ms 0.61% VecScale_Seq 778ms 0.61% 90.60% 778ms 0.61% dscal_ 759ms 0.6% 91.20% 759ms 0.6% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 735ms 0.58% 91.77% 735ms 0.58% __memset_avx2_unaligned_erms 0 0% 91.77% 724ms 0.57% PetscMemzero (inline) 0 0% 91.77% 716ms 0.56% BidomainProblem::WriteOneStep 5ms 0.0039% 91.78% 697ms 0.55% VecDuplicate