File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12728ms, 85.47% of 14892ms total Dropped 749 nodes (cum <= 74.46ms) flat flat% sum% cum cum% 0 0% 0% 14884ms 99.95% __libc_start_call_main 0 0% 0% 14884ms 99.95% __libc_start_main_impl 0 0% 0% 14884ms 99.95% _start 0 0% 0% 14881ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14881ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14881ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14881ms 99.93% main 0 0% 0% 14839ms 99.64% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14839ms 99.64% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14838ms 99.64% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14816ms 99.49% AbstractCardiacProblem::Solve 5ms 0.034% 0.047% 11407ms 76.60% AbstractDynamicLinearPdeSolver::Solve 76ms 0.51% 0.56% 9004ms 60.46% AbstractCardiacTissue::SolveCellSystems 106ms 0.71% 1.27% 5494ms 36.89% AbstractCardiacCell::ComputeExceptVoltage 117ms 0.79% 2.05% 4856ms 32.61% AbstractOneStepIvpOdeSolver::InternalSolve 144ms 0.97% 3.02% 4132ms 27.75% EulerIvpOdeSolver::CalculateNextYValue 892ms 5.99% 9.01% 3940ms 26.46% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1896ms 12.73% 21.74% 3613ms 24.26% __GI___exp 0 0% 21.74% 3348ms 22.48% MonodomainProblem::WriteOneStep 2ms 0.013% 21.76% 3194ms 21.45% Hdf5DataWriter::PutVector 1ms 0.0067% 21.76% 3189ms 21.41% H5Dwrite 4ms 0.027% 21.79% 3161ms 21.23% H5D__write 96ms 0.64% 22.43% 2822ms 18.95% AbstractCardiacTissue::UpdateCaches (inline) 781ms 5.24% 27.68% 2632ms 17.67% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.68% 1917ms 12.87% H5D__chunk_collective_write 21ms 0.14% 27.82% 1917ms 12.87% H5F_set_coll_metadata_reads 18ms 0.12% 27.94% 1696ms 11.39% H5FD_s3comms_uriencode 1323ms 8.88% 36.83% 1642ms 11.03% __ieee754_exp_fma 2ms 0.013% 36.84% 1600ms 10.74% LinearSystem::Solve 0 0% 36.84% 1459ms 9.80% KSPSolve 4ms 0.027% 36.87% 1459ms 9.80% KSPSolve_Private 4ms 0.027% 36.89% 1451ms 9.74% KSPSolve_CG 1ms 0.0067% 36.90% 1374ms 9.23% H5F_block_write 46ms 0.31% 37.21% 1373ms 9.22% 1ms 0.0067% 37.21% 1373ms 9.22% H5PB_write 5ms 0.034% 37.25% 1372ms 9.21% H5F__accum_write 1ms 0.0067% 37.25% 1367ms 9.18% H5FD_write 1ms 0.0067% 37.26% 1285ms 8.63% H5D__mpio_select_write 0 0% 37.26% 1162ms 7.80% PMPI_File_write_at_all 1140ms 7.66% 44.92% 1143ms 7.68% __GI_pwritev64 14ms 0.094% 45.01% 1123ms 7.54% H5D__chunk_cacheable 7ms 0.047% 45.06% 982ms 6.59% std::pow (inline) 303ms 2.03% 47.09% 970ms 6.51% H5S_select_iterate 75ms 0.5% 47.60% 970ms 6.51% __pow 93ms 0.62% 48.22% 894ms 6.00% __ieee754_pow_fma 1ms 0.0067% 48.23% 808ms 5.43% PCApply 1ms 0.0067% 48.23% 806ms 5.41% PCApply_BJacobi_Singleblock 351ms 2.36% 50.59% 777ms 5.22% MonodomainSolver::SetupLinearSystem 1ms 0.0067% 50.60% 770ms 5.17% KSPSolve_PREONLY 2ms 0.013% 50.61% 767ms 5.15% MatSolve 0 0% 50.61% 767ms 5.15% PCApply_ICC 758ms 5.09% 55.70% 765ms 5.14% MatSolve_SeqSBAIJ_1_NaturalOrdering 75ms 0.5% 56.20% 669ms 4.49% H5D__chunk_set_sizes 1ms 0.0067% 56.21% 597ms 4.01% MatMult 594ms 3.99% 60.20% 596ms 4.00% MatMult_SeqAIJ 0 0% 60.20% 585ms 3.93% KSP_PCApply.lto_priv.7 460ms 3.09% 63.29% 460ms 3.09% log_inline (inline) 49ms 0.33% 63.62% 407ms 2.73% H5S_mpio_space_type 202ms 1.36% 64.97% 368ms 2.47% CellLuoRudy1991FromCellML::VerifyStateVariables 296ms 1.99% 66.96% 300ms 2.01% exp_inline (inline) 1ms 0.0067% 66.97% 290ms 1.95% KSPConvergedDefault 105ms 0.71% 67.67% 256ms 1.72% TimeStepper::TimeStepper 255ms 1.71% 69.39% 255ms 1.71% [libchaste_heart.so] 206ms 1.38% 70.77% 252ms 1.69% top12 (inline) 70ms 0.47% 71.24% 251ms 1.69% AbstractCardiacCell::SetVoltage (partial-inline) 8ms 0.054% 71.29% 233ms 1.56% H5VM_chunk_index 0 0% 71.29% 223ms 1.50% KSP_PCApply 28ms 0.19% 71.48% 195ms 1.31% __GI___libc_free 32ms 0.21% 71.70% 180ms 1.21% __GI___libc_malloc 11ms 0.074% 71.77% 177ms 1.19% ompi_datatype_destroy 7ms 0.047% 71.82% 171ms 1.15% MPI_Type_free 168ms 1.13% 72.95% 168ms 1.13% ddot_ 71ms 0.48% 73.42% 167ms 1.12% _int_free 136ms 0.91% 74.34% 167ms 1.12% _int_malloc 132ms 0.89% 75.22% 159ms 1.07% AbstractParameterisedSystem::SetAnyVariable 158ms 1.06% 76.28% 158ms 1.06% asuint64 (inline) 4ms 0.027% 76.31% 155ms 1.04% ompi_datatype_create 0 0% 76.31% 154ms 1.03% Hdf5DataWriter::PutUnlimitedVariable 114ms 0.77% 77.07% 153ms 1.03% AbstractOneStepIvpOdeSolver::Solve 1ms 0.0067% 77.08% 153ms 1.03% ompi_info_register_framework_params 37ms 0.25% 77.33% 152ms 1.02% ompi_datatype_release_args 37ms 0.25% 77.58% 151ms 1.01% H5S_set_version 149ms 1.00% 78.58% 149ms 1.00% TimeStepper::CalculateNextTime 1ms 0.0067% 78.59% 136ms 0.91% PMPI_File_set_view 135ms 0.91% 79.49% 135ms 0.91% H5VM_chunk_index_scaled 119ms 0.8% 80.29% 119ms 0.8% __memcpy_avx_unaligned_erms 51ms 0.34% 80.63% 114ms 0.77% H5VM_array_calc 94ms 0.63% 81.27% 111ms 0.75% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 110ms 0.74% 82.00% 110ms 0.74% __ieee754_log_fma 0 0% 82.00% 108ms 0.73% VecNorm 59ms 0.4% 82.40% 107ms 0.72% H5S_hyper_add_span_element 74ms 0.5% 82.90% 107ms 0.72% TimeStepper::AdvanceOneTimeStep 0 0% 82.90% 107ms 0.72% VecTDot 0 0% 82.90% 107ms 0.72% VecTDot_Seq 0 0% 82.90% 107ms 0.72% VecXDot_Seq_Private.constprop.0 0 0% 82.90% 102ms 0.68% VecDuplicate 3ms 0.02% 82.92% 102ms 0.68% VecDuplicate_MPI 1ms 0.0067% 82.92% 98ms 0.66% VecNorm_Seq 42ms 0.28% 83.21% 95ms 0.64% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 92ms 0.62% 83.82% 92ms 0.62% H5VM_array_offset_pre 1ms 0.0067% 83.83% 91ms 0.61% ompi_datatype_duplicate 68ms 0.46% 84.29% 88ms 0.59% AbstractParameterisedSystem::GetAnyVariable 0 0% 84.29% 88ms 0.59% std::vector::_M_assign_aux (inline) 0 0% 84.29% 88ms 0.59% std::vector::assign (inline) 1ms 0.0067% 84.29% 82ms 0.55% PMPI_Type_create_resized 79ms 0.53% 84.82% 79ms 0.53% TimeStepper::GetNextTimeStep 77ms 0.52% 85.34% 77ms 0.52% [libm.so.6] 19ms 0.13% 85.47% 75ms 0.5% std::__copy_move::__copy_m (inline) 0 0% 85.47% 75ms 0.5% std::__copy_move_a (inline) 0 0% 85.47% 75ms 0.5% std::__copy_move_a1 (inline) 0 0% 85.47% 75ms 0.5% std::__copy_move_a2 (inline) 0 0% 85.47% 75ms 0.5% std::copy (inline)