File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 423ms, 87.40% of 484ms total Dropped 203 nodes (cum <= 2.42ms) flat flat% sum% cum cum% 0 0% 0% 474ms 97.93% __libc_start_call_main 0 0% 0% 474ms 97.93% __libc_start_main_impl 0 0% 0% 474ms 97.93% _start 0 0% 0% 471ms 97.31% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 471ms 97.31% CxxTest::TestRunner::runAllTests 0 0% 0% 471ms 97.31% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 471ms 97.31% main 0 0% 0% 431ms 89.05% CxxTest::RealTestDescription::run 0 0% 0% 431ms 89.05% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 431ms 89.05% CxxTest::TestRunner::runTest (inline) 0 0% 0% 431ms 89.05% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 431ms 89.05% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 425ms 87.81% AbstractCardiacProblem::Solve 0 0% 0% 425ms 87.81% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 382ms 78.93% LinearSystem::Solve 0 0% 0% 379ms 78.31% KSPSolve 0 0% 0% 379ms 78.31% KSPSolve_CG 0 0% 0% 379ms 78.31% KSPSolve_Private 0 0% 0% 222ms 45.87% KSP_PCApply.lto_priv.7 0 0% 0% 221ms 45.66% PCApply 0 0% 0% 221ms 45.66% PCApply_BJacobi_Singleblock 0 0% 0% 192ms 39.67% KSPSolve_PREONLY (partial-inline) 1ms 0.21% 0.21% 176ms 36.36% MatSolve 0 0% 0.21% 176ms 36.36% PCApply_ICC 174ms 35.95% 36.16% 175ms 36.16% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 36.16% 72ms 14.88% MatMult 0 0% 36.16% 72ms 14.88% MatMult_SeqAIJ 72ms 14.88% 51.03% 72ms 14.88% MatMult_SeqAIJ_Inode (inline) 62ms 12.81% 63.84% 62ms 12.81% ddot_ 0 0% 63.84% 45ms 9.30% VecTDot 0 0% 63.84% 45ms 9.30% VecTDot_Seq 0 0% 63.84% 45ms 9.30% VecXDot_Seq_Private.constprop.0 0 0% 63.84% 37ms 7.64% CxxTest::RealWorldDescription::setUp 0 0% 63.84% 37ms 7.64% PMPI_Init_thread 0 0% 63.84% 37ms 7.64% PetscInitialize 0 0% 63.84% 37ms 7.64% PetscSetup::setUpWorld 0 0% 63.84% 37ms 7.64% PetscSetupUtils::CommonSetup 0 0% 63.84% 37ms 7.64% PetscSetupUtils::InitialisePetsc 0 0% 63.84% 37ms 7.64% ompi_mpi_init 1ms 0.21% 64.05% 32ms 6.61% AbstractCardiacTissue::SolveCellSystems 1ms 0.21% 64.26% 32ms 6.61% MatNullSpaceRemove 0 0% 64.26% 28ms 5.79% 0 0% 64.26% 23ms 4.75% orte_init 0 0% 64.26% 22ms 4.55% KSP_PCApply (partial-inline) 0 0% 64.26% 20ms 4.13% VecNorm 0 0% 64.26% 20ms 4.13% VecNorm_Seq 0 0% 64.26% 19ms 3.93% AbstractCardiacCell::ComputeExceptVoltage 0 0% 64.26% 19ms 3.93% VecMDot 1ms 0.21% 64.46% 19ms 3.93% VecMXDot_Private 18ms 3.72% 68.18% 18ms 3.72% VecMDot_Seq 0 0% 68.18% 18ms 3.72% __GI__dl_catch_exception 0 0% 68.18% 18ms 3.72% _dl_catch_error 0 0% 68.18% 18ms 3.72% _dlerror_run 0 0% 68.18% 17ms 3.51% mca_base_framework_open 0 0% 68.18% 17ms 3.51% opal_stackframe_output 0 0% 68.18% 16ms 3.31% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 68.18% 16ms 3.31% ___dlopen 0 0% 68.18% 16ms 3.31% _dl_open 0 0% 68.18% 16ms 3.31% dl_open_worker 0 0% 68.18% 16ms 3.31% dlopen_doit 0 0% 68.18% 16ms 3.31% dlopen_implementation (inline) 0 0% 68.18% 16ms 3.31% mca_base_component_find 0 0% 68.18% 16ms 3.31% mca_base_component_repository_open 0 0% 68.18% 16ms 3.31% mca_base_framework_components_register 0 0% 68.18% 16ms 3.31% mca_base_framework_register 1ms 0.21% 68.39% 14ms 2.89% EulerIvpOdeSolver::CalculateNextYValue 6ms 1.24% 69.63% 14ms 2.89% __GI___exp 0 0% 69.63% 14ms 2.89% hwloc_topology_load 2ms 0.41% 70.04% 13ms 2.69% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 70.04% 13ms 2.69% dl_open_worker_begin 0 0% 70.04% 13ms 2.69% hwloc_linux_get_tid_last_cpu_location 0 0% 70.04% 12ms 2.48% VecMAXPY 11ms 2.27% 72.31% 12ms 2.48% VecMAXPY_Seq 0 0% 72.31% 12ms 2.48% _dl_init 0 0% 72.31% 12ms 2.48% call_init (inline) 0 0% 72.31% 11ms 2.27% VecAYPX 11ms 2.27% 74.59% 11ms 2.27% VecAYPX_Seq 0 0% 74.59% 11ms 2.27% VecDuplicate 1ms 0.21% 74.79% 10ms 2.07% AbstractCardiacTissue::UpdateCaches (inline) 3ms 0.62% 75.41% 10ms 2.07% BidomainSolver::SetupLinearSystem 0 0% 75.41% 10ms 2.07% VecDuplicate_Seq 6ms 1.24% 76.65% 9ms 1.86% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.21% 76.86% 9ms 1.86% _dl_map_object 0 0% 76.86% 9ms 1.86% _dl_start_user 0 0% 76.86% 9ms 1.86% boost::serialization::singleton::get_instance (partial-inline) 6ms 1.24% 78.10% 8ms 1.65% __ieee754_exp_fma 0 0% 78.10% 7ms 1.45% KSPConvergedDefault 1ms 0.21% 78.31% 7ms 1.45% PetscMallocA 0 0% 78.31% 7ms 1.45% _dl_lookup_symbol_x 2ms 0.41% 78.72% 7ms 1.45% _dl_runtime_resolve_xsavec 0 0% 78.72% 7ms 1.45% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 1ms 0.21% 78.93% 6ms 1.24% PetscMallocAlign (partial-inline) 0 0% 78.93% 6ms 1.24% VecSetType 0 0% 78.93% 6ms 1.24% mca_base_framework_components_open 0 0% 78.93% 6ms 1.24% mca_topo_base_dist_graph_neighbors_count 0 0% 78.93% 5ms 1.03% VecAXPY 0 0% 78.93% 5ms 1.03% VecAXPY_Seq 0 0% 78.93% 5ms 1.03% VecCreate 0 0% 78.93% 5ms 1.03% VecCreate_Seq 5ms 1.03% 79.96% 5ms 1.03% VecGetArrayRead 0 0% 79.96% 5ms 1.03% __GI___libc_malloc 1ms 0.21% 80.17% 5ms 1.03% _dl_fixup 0 0% 80.17% 5ms 1.03% _dl_map_object_deps 4ms 0.83% 80.99% 5ms 1.03% _int_malloc 0 0% 80.99% 5ms 1.03% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 5ms 1.03% 82.02% 5ms 1.03% daxpy_ 5ms 1.03% 83.06% 5ms 1.03% do_lookup_x 0 0% 83.06% 5ms 1.03% opal_hwloc_base_get_topology 0 0% 83.06% 5ms 1.03% openaux 0 0% 83.06% 5ms 1.03% orte_ess_base_proc_binding 0 0% 83.06% 4ms 0.83% AbstractCardiacProblem::Initialise 0 0% 83.06% 4ms 0.83% PetscMemzero (inline) 0 0% 83.06% 4ms 0.83% VecDestroy 4ms 0.83% 83.88% 4ms 0.83% __GI___libc_read 1ms 0.21% 84.09% 4ms 0.83% __cxa_finalize 4ms 0.83% 84.92% 4ms 0.83% __memset_avx2_unaligned_erms 4ms 0.83% 85.74% 4ms 0.83% __mmap64 0 0% 85.74% 4ms 0.83% _dl_call_fini 0 0% 85.74% 4ms 0.83% _dl_map_object_from_fd 0 0% 85.74% 4ms 0.83% _dl_map_segments (inline) 0 0% 85.74% 4ms 0.83% boost::serialization::singleton::get_mutable_instance (inline) 0 0% 85.74% 4ms 0.83% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 85.74% 3ms 0.62% CxxTest::RealWorldDescription::tearDown 0 0% 85.74% 3ms 0.62% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 85.74% 3ms 0.62% PetscFinalize 0 0% 85.74% 3ms 0.62% PetscHeaderDestroy_Private 0 0% 85.74% 3ms 0.62% PetscSetup::tearDownWorld 0 0% 85.74% 3ms 0.62% PetscSetupUtils::CommonFinalize 0 0% 85.74% 3ms 0.62% XOpenDisplay 0 0% 85.74% 3ms 0.62% [hwloc_gl.so] 0 0% 85.74% 3ms 0.62% [libxcb.so.1.1.0] 0 0% 85.74% 3ms 0.62% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 85.74% 3ms 0.62% _XConnectXCB 3ms 0.62% 86.36% 3ms 0.62% __GI___clock_nanosleep 0 0% 86.36% 3ms 0.62% __GI___nanosleep 0 0% 86.36% 3ms 0.62% __GI_exit 3ms 0.62% 86.98% 3ms 0.62% __libc_openat64 0 0% 86.98% 3ms 0.62% __run_exit_handlers 0 0% 86.98% 3ms 0.62% _dl_fini 1ms 0.21% 87.19% 3ms 0.62% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 1ms 0.21% 87.40% 3ms 0.62% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 87.40% 3ms 0.62% ompi_mpi_finalize 0 0% 87.40% 3ms 0.62% operator new 0 0% 87.40% 3ms 0.62% usleep 0 0% 87.40% 3ms 0.62% xcb_connect_to_display_with_auth_info