File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 119356ms, 91.57% of 130348ms total Dropped 1138 nodes (cum <= 651.74ms) flat flat% sum% cum cum% 0 0% 0% 130331ms 100% __libc_start_call_main 0 0% 0% 130331ms 100% __libc_start_main_impl 0 0% 0% 130331ms 100% _start 0 0% 0% 130328ms 100% main 0 0% 0% 130327ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 130327ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 130327ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 130292ms 100% AbstractConvergenceTester::Converge 0 0% 0% 130292ms 100% CxxTest::RealTestDescription::run 0 0% 0% 130292ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 130292ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 130292ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 130292ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 8ms 0.0061% 0.0061% 129119ms 99.06% AbstractCardiacProblem::Solve 13ms 0.01% 0.016% 128271ms 98.41% AbstractDynamicLinearPdeSolver::Solve 4ms 0.0031% 0.019% 68806ms 52.79% LinearSystem::Solve 4ms 0.0031% 0.022% 68296ms 52.40% KSPSolve 19ms 0.015% 0.037% 68293ms 52.39% KSPSolve_Private 25ms 0.019% 0.056% 67965ms 52.14% KSPSolve_SYMMLQ 952ms 0.73% 0.79% 50243ms 38.55% AbstractCardiacTissue::SolveCellSystems 2ms 0.0015% 0.79% 39529ms 30.33% PCApply 3ms 0.0023% 0.79% 39511ms 30.31% PCApply_BJacobi_Singleblock 1670ms 1.28% 2.07% 37612ms 28.86% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 1ms 0.00077% 2.07% 37303ms 28.62% KSPSolve_PREONLY (partial-inline) 3ms 0.0023% 2.07% 36135ms 27.72% PCApply_ICC 8ms 0.0061% 2.08% 36132ms 27.72% MatSolve 35705ms 27.39% 29.47% 36124ms 27.71% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 5ms 0.0038% 29.48% 33948ms 26.04% KSP_PCApply.lto_priv.18 7718ms 5.92% 35.40% 32687ms 25.08% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 8ms 0.0061% 35.40% 22825ms 17.51% MatMult 301ms 0.23% 35.63% 22817ms 17.50% MatMult_SeqAIJ (partial-inline) 22309ms 17.11% 52.75% 22812ms 17.50% MatMult_SeqAIJ_Inode (inline) 2292ms 1.76% 54.51% 16733ms 12.84% CardiacNewtonSolver::Solve 222ms 0.17% 54.68% 10431ms 8.00% AbstractCardiacTissue::UpdateCaches (inline) 5430ms 4.17% 58.84% 9877ms 7.58% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1876ms 1.44% 60.28% 9845ms 7.55% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1776ms 1.36% 61.65% 9346ms 7.17% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1351ms 1.04% 62.68% 8186ms 6.28% BidomainSolver::SetupLinearSystem 2ms 0.0015% 62.68% 7552ms 5.79% KSP_PCApply (partial-inline) 7257ms 5.57% 68.25% 7257ms 5.57% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 7ms 0.0054% 68.26% 6993ms 5.36% KSPConvergedDefault 4574ms 3.51% 71.77% 4675ms 3.59% __ieee754_log_fma 0 0% 71.77% 4109ms 3.15% boost::numeric::ublas::norm_inf (inline) 2785ms 2.14% 73.90% 4109ms 3.15% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 73.90% 4109ms 3.15% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 73.90% 4109ms 3.15% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3311ms 2.54% 76.44% 3311ms 2.54% ddot_ 5ms 0.0038% 76.45% 3286ms 2.52% MatNullSpaceRemove 35ms 0.027% 76.47% 3141ms 2.41% std::pow (inline) 390ms 0.3% 76.77% 3093ms 2.37% __pow 2018ms 1.55% 78.32% 3056ms 2.34% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 5ms 0.0038% 78.32% 2726ms 2.09% VecDot 0 0% 78.32% 2721ms 2.09% VecDot_Seq 0 0% 78.32% 2721ms 2.09% VecXDot_Seq_Private.constprop.0 2699ms 2.07% 80.39% 2699ms 2.07% __memcpy_avx_unaligned_erms 345ms 0.26% 80.66% 2674ms 2.05% __ieee754_pow_fma 0 0% 80.66% 2657ms 2.04% PetscMemcpy (inline) 22ms 0.017% 80.68% 2266ms 1.74% VecCopy 3ms 0.0023% 80.68% 2242ms 1.72% VecCopy_Seq (partial-inline) 17ms 0.013% 80.69% 2158ms 1.66% VecAXPY 6ms 0.0046% 80.70% 2141ms 1.64% VecAXPY_Seq 2125ms 1.63% 82.33% 2125ms 1.63% daxpy_ 8ms 0.0061% 82.33% 2057ms 1.58% VecMDot 8ms 0.0061% 82.34% 2049ms 1.57% VecMXDot_Private 2035ms 1.56% 83.90% 2039ms 1.56% VecMDot_Seq 1ms 0.00077% 83.90% 2026ms 1.55% AbstractFeVolumeIntegralAssembler::DoAssemble 23ms 0.018% 83.92% 1689ms 1.30% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1563ms 1.20% 85.12% 1623ms 1.25% exp_inline (inline) 1450ms 1.11% 86.23% 1450ms 1.11% [libchaste_heart.so] 0 0% 86.23% 1396ms 1.07% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.23% 1318ms 1.01% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.23% 1318ms 1.01% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.23% 1318ms 1.01% boost_numeric_ublas_abs (inline) 1318ms 1.01% 87.24% 1318ms 1.01% std::abs (inline) 7ms 0.0054% 87.25% 1224ms 0.94% VecMAXPY 1211ms 0.93% 88.18% 1217ms 0.93% VecMAXPY_Seq 785ms 0.6% 88.78% 1096ms 0.84% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 5ms 0.0038% 88.78% 1095ms 0.84% boost::numeric::ublas::matrix_assign (inline) 216ms 0.17% 88.95% 1085ms 0.83% boost::numeric::ublas::indexing_matrix_assign 1018ms 0.78% 89.73% 1018ms 0.78% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 0 0% 89.73% 1005ms 0.77% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 89.73% 1005ms 0.77% CuboidMeshConstructor::Construct 0 0% 89.73% 1005ms 0.77% DistributedTetrahedralMesh::ConstructCuboid 3ms 0.0023% 89.73% 912ms 0.7% VecNorm 1ms 0.00077% 89.73% 905ms 0.69% Element::Element 2ms 0.0015% 89.73% 903ms 0.69% AbstractTetrahedralElement::CalculateJacobian 1ms 0.00077% 89.73% 897ms 0.69% VecNorm_Seq 11ms 0.0084% 89.74% 868ms 0.67% boost::numeric::ublas::c_matrix::c_matrix (inline) 4ms 0.0031% 89.75% 856ms 0.66% BidomainAssembler::ComputeMatrixTerm 2ms 0.0015% 89.75% 848ms 0.65% AbstractTetrahedralElement::AbstractTetrahedralElement 6ms 0.0046% 89.75% 789ms 0.61% VecScale 4ms 0.0031% 89.75% 783ms 0.6% VecScale_Seq 774ms 0.59% 90.35% 774ms 0.59% dscal_ 1ms 0.00077% 90.35% 771ms 0.59% BidomainProblem::WriteOneStep 699ms 0.54% 90.89% 699ms 0.54% __memset_avx2_unaligned_erms 2ms 0.0015% 90.89% 685ms 0.53% AbstractBidomainSolver::FinaliseLinearSystem 217ms 0.17% 91.05% 681ms 0.52% AbstractBidomainSolver::CheckCompatibilityCondition 670ms 0.51% 91.57% 670ms 0.51% log_inline (inline) 0 0% 91.57% 661ms 0.51% PetscMemzero (inline)