File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12660ms, 85.67% of 14778ms total Dropped 781 nodes (cum <= 73.89ms) flat flat% sum% cum cum% 0 0% 0% 14769ms 99.94% __libc_start_call_main 0 0% 0% 14769ms 99.94% __libc_start_main_impl 0 0% 0% 14769ms 99.94% _start 0 0% 0% 14766ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14766ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14766ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14766ms 99.92% main 0 0% 0% 14723ms 99.63% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14723ms 99.63% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14723ms 99.63% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14700ms 99.47% AbstractCardiacProblem::Solve 3ms 0.02% 0.041% 11311ms 76.54% AbstractDynamicLinearPdeSolver::Solve 88ms 0.6% 0.64% 8915ms 60.33% AbstractCardiacTissue::SolveCellSystems 92ms 0.62% 1.26% 5348ms 36.19% AbstractCardiacCell::ComputeExceptVoltage 116ms 0.78% 2.04% 4658ms 31.52% AbstractOneStepIvpOdeSolver::InternalSolve 132ms 0.89% 2.94% 3988ms 26.99% EulerIvpOdeSolver::CalculateNextYValue 855ms 5.79% 8.72% 3816ms 25.82% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1812ms 12.26% 20.98% 3584ms 24.25% __GI___exp 0 0% 20.98% 3326ms 22.51% MonodomainProblem::WriteOneStep 3ms 0.02% 21.00% 3174ms 21.48% Hdf5DataWriter::PutVector 3ms 0.02% 21.02% 3146ms 21.29% H5Dwrite 1ms 0.0068% 21.03% 3116ms 21.09% H5D__write 120ms 0.81% 21.84% 2878ms 19.47% AbstractCardiacTissue::UpdateCaches (inline) 771ms 5.22% 27.06% 2669ms 18.06% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.06% 1938ms 13.11% H5D__chunk_collective_write 12ms 0.081% 27.14% 1938ms 13.11% H5F_set_coll_metadata_reads 24ms 0.16% 27.30% 1718ms 11.63% H5FD_s3comms_uriencode 1392ms 9.42% 36.72% 1698ms 11.49% __ieee754_exp_fma 1ms 0.0068% 36.73% 1633ms 11.05% LinearSystem::Solve 0 0% 36.73% 1523ms 10.31% KSPSolve 7ms 0.047% 36.78% 1523ms 10.31% KSPSolve_Private 2ms 0.014% 36.79% 1517ms 10.27% KSPSolve_CG 45ms 0.3% 37.10% 1411ms 9.55% 4ms 0.027% 37.12% 1396ms 9.45% H5F_block_write 2ms 0.014% 37.14% 1392ms 9.42% H5PB_write 0 0% 37.14% 1390ms 9.41% H5FD_write 0 0% 37.14% 1390ms 9.41% H5F__accum_write 3ms 0.02% 37.16% 1308ms 8.85% H5D__mpio_select_write 1ms 0.0068% 37.16% 1221ms 8.26% PMPI_File_write_at_all 1196ms 8.09% 45.26% 1199ms 8.11% __GI_pwritev64 11ms 0.074% 45.33% 1059ms 7.17% H5D__chunk_cacheable 3ms 0.02% 45.35% 956ms 6.47% std::pow (inline) 86ms 0.58% 45.93% 953ms 6.45% __pow 2ms 0.014% 45.95% 905ms 6.12% PCApply 295ms 2.00% 47.94% 902ms 6.10% H5S_select_iterate 0 0% 47.94% 900ms 6.09% PCApply_BJacobi_Singleblock 1ms 0.0068% 47.95% 868ms 5.87% KSPSolve_PREONLY 86ms 0.58% 48.53% 867ms 5.87% __ieee754_pow_fma 1ms 0.0068% 48.54% 864ms 5.85% MatSolve 0 0% 48.54% 864ms 5.85% PCApply_ICC 851ms 5.76% 54.30% 863ms 5.84% MatSolve_SeqSBAIJ_1_NaturalOrdering 344ms 2.33% 56.62% 739ms 5.00% MonodomainSolver::SetupLinearSystem 0 0% 56.62% 655ms 4.43% KSP_PCApply.lto_priv.7 74ms 0.5% 57.13% 625ms 4.23% H5D__chunk_set_sizes 5ms 0.034% 57.16% 529ms 3.58% MatMult 522ms 3.53% 60.69% 524ms 3.55% MatMult_SeqAIJ 441ms 2.98% 63.68% 441ms 2.98% log_inline (inline) 204ms 1.38% 65.06% 416ms 2.81% CellLuoRudy1991FromCellML::VerifyStateVariables 55ms 0.37% 65.43% 406ms 2.75% H5S_mpio_space_type 2ms 0.014% 65.44% 311ms 2.10% KSPConvergedDefault 295ms 2.00% 67.44% 300ms 2.03% exp_inline (inline) 100ms 0.68% 68.11% 265ms 1.79% TimeStepper::TimeStepper 195ms 1.32% 69.43% 257ms 1.74% top12 (inline) 0 0% 69.43% 253ms 1.71% KSP_PCApply 243ms 1.64% 71.08% 243ms 1.64% [libchaste_heart.so] 7ms 0.047% 71.13% 203ms 1.37% H5VM_chunk_index 182ms 1.23% 72.36% 182ms 1.23% ddot_ 44ms 0.3% 72.66% 181ms 1.22% __GI___libc_malloc 139ms 0.94% 73.60% 172ms 1.16% _int_malloc 26ms 0.18% 73.77% 168ms 1.14% __GI___libc_free 4ms 0.027% 73.80% 167ms 1.13% ompi_datatype_destroy 5ms 0.034% 73.83% 165ms 1.12% MPI_Type_free 130ms 0.88% 74.71% 162ms 1.10% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 39ms 0.26% 74.98% 161ms 1.09% AbstractCardiacCell::SetVoltage (partial-inline) 13ms 0.088% 75.06% 159ms 1.08% ompi_datatype_create 156ms 1.06% 76.12% 156ms 1.06% asuint64 (inline) 2ms 0.014% 76.13% 152ms 1.03% Hdf5DataWriter::PutUnlimitedVariable 150ms 1.02% 77.15% 150ms 1.02% TimeStepper::CalculateNextTime 3ms 0.02% 77.17% 150ms 1.02% ompi_info_register_framework_params 37ms 0.25% 77.42% 148ms 1.00% ompi_datatype_release_args 104ms 0.7% 78.12% 142ms 0.96% AbstractOneStepIvpOdeSolver::Solve 55ms 0.37% 78.50% 142ms 0.96% _int_free 64ms 0.43% 78.93% 140ms 0.95% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 29ms 0.2% 79.12% 135ms 0.91% H5S_set_version 102ms 0.69% 79.81% 127ms 0.86% AbstractParameterisedSystem::GetAnyVariable 3ms 0.02% 79.83% 120ms 0.81% VecNorm 112ms 0.76% 80.59% 113ms 0.76% __ieee754_log_fma 113ms 0.76% 81.36% 113ms 0.76% __memcpy_avx_unaligned_erms 0 0% 81.36% 112ms 0.76% VecNorm_Seq 90ms 0.61% 81.97% 111ms 0.75% AbstractParameterisedSystem::SetAnyVariable 55ms 0.37% 82.34% 111ms 0.75% H5S_hyper_add_span_element 110ms 0.74% 83.08% 110ms 0.74% H5VM_chunk_index_scaled 40ms 0.27% 83.35% 106ms 0.72% H5VM_array_calc 35ms 0.24% 83.59% 105ms 0.71% AbstractCardiacCell::GetVoltage (partial-inline) 1ms 0.0068% 83.60% 102ms 0.69% VecTDot 1ms 0.0068% 83.60% 101ms 0.68% PMPI_File_set_view 0 0% 83.60% 99ms 0.67% VecTDot_Seq 0 0% 83.60% 99ms 0.67% VecXDot_Seq_Private.constprop.0 87ms 0.59% 84.19% 87ms 0.59% H5VM_array_offset_pre 1ms 0.0068% 84.20% 85ms 0.58% VecDuplicate 63ms 0.43% 84.63% 84ms 0.57% TimeStepper::AdvanceOneTimeStep 0 0% 84.63% 84ms 0.57% VecDuplicate_MPI 3ms 0.02% 84.65% 81ms 0.55% ompi_datatype_duplicate 1ms 0.0068% 84.65% 79ms 0.53% PMPI_Type_create_resized 76ms 0.51% 85.17% 76ms 0.51% std::isinf (inline) 74ms 0.5% 85.67% 74ms 0.5% [libm.so.6]