File: Test3dBidomainProblemWithMetisForEfficiency Type: cpu Showing nodes accounting for 3688ms, 85.93% of 4292ms total Dropped 464 nodes (cum <= 21.46ms) flat flat% sum% cum cum% 0 0% 0% 4283ms 99.79% __libc_start_call_main 0 0% 0% 4283ms 99.79% __libc_start_main_impl 0 0% 0% 4283ms 99.79% _start 0 0% 0% 4280ms 99.72% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 4280ms 99.72% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 4280ms 99.72% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 4280ms 99.72% main 0 0% 0% 4238ms 98.74% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 4238ms 98.74% CxxTest::TestRunner::runTest (inline) 0 0% 0% 4238ms 98.74% Test3dBidomainProblemWithMetisForEfficiency::TestBidomain3d 0 0% 0% 4229ms 98.53% AbstractCardiacProblem::Solve 0 0% 0% 4215ms 98.21% AbstractDynamicLinearPdeSolver::Solve 18ms 0.42% 0.42% 2102ms 48.97% AbstractCardiacTissue::SolveCellSystems 0 0% 0.42% 1756ms 40.91% LinearSystem::Solve 0 0% 0.42% 1710ms 39.84% KSPSolve 7ms 0.16% 0.58% 1710ms 39.84% KSPSolve_Private 3ms 0.07% 0.65% 1647ms 38.37% KSPSolve_SYMMLQ 16ms 0.37% 1.03% 1193ms 27.80% AbstractCardiacCell::ComputeExceptVoltage 1ms 0.023% 1.05% 1109ms 25.84% PCApply 2ms 0.047% 1.10% 1101ms 25.65% PCApply_BJacobi_Singleblock 24ms 0.56% 1.65% 990ms 23.07% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 1.65% 930ms 21.67% KSPSolve_PREONLY (partial-inline) 2ms 0.047% 1.70% 885ms 20.62% MatSolve 0 0% 1.70% 885ms 20.62% PCApply_ICC 875ms 20.39% 22.09% 882ms 20.55% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 22.09% 836ms 19.48% KSP_PCApply.lto_priv.18 55ms 1.28% 23.37% 820ms 19.11% EulerIvpOdeSolver::CalculateNextYValue 203ms 4.73% 28.10% 756ms 17.61% CellLuoRudy1991FromCellML::EvaluateYDerivatives 31ms 0.72% 28.82% 747ms 17.40% AbstractCardiacTissue::UpdateCaches (inline) 339ms 7.90% 36.72% 693ms 16.15% __GI___exp 226ms 5.27% 41.99% 677ms 15.77% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.047% 42.03% 424ms 9.88% MatMult 13ms 0.3% 42.33% 419ms 9.76% MatMult_SeqAIJ (partial-inline) 403ms 9.39% 51.72% 419ms 9.76% MatMult_SeqAIJ_Inode (inline) 3ms 0.07% 51.79% 352ms 8.20% KSPConvergedDefault 0 0% 51.79% 346ms 8.06% KSP_PCApply (partial-inline) 278ms 6.48% 58.27% 335ms 7.81% __ieee754_exp_fma 65ms 1.51% 59.79% 308ms 7.18% BidomainSolver::SetupLinearSystem 3ms 0.07% 59.86% 241ms 5.62% std::pow (inline) 25ms 0.58% 60.44% 238ms 5.55% __pow 27ms 0.63% 61.07% 213ms 4.96% __ieee754_pow_fma 0 0% 61.07% 128ms 2.98% MatNullSpaceRemove 97ms 2.26% 63.33% 97ms 2.26% log_inline (inline) 52ms 1.21% 64.54% 96ms 2.24% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 64.54% 95ms 2.21% VecDuplicate 79ms 1.84% 66.38% 82ms 1.91% exp_inline (inline) 24ms 0.56% 66.94% 79ms 1.84% MPI_Wtime 75ms 1.75% 68.69% 75ms 1.75% ddot_ 0 0% 68.69% 74ms 1.72% VecMDot 5ms 0.12% 68.80% 74ms 1.72% VecMXDot_Private 35ms 0.82% 69.62% 65ms 1.51% TimeStepper::TimeStepper 8ms 0.19% 69.80% 62ms 1.44% VecCopy 10ms 0.23% 70.04% 61ms 1.42% AbstractCardiacCell::SetVoltage (partial-inline) 42ms 0.98% 71.02% 60ms 1.40% AbstractOneStepIvpOdeSolver::Solve 11ms 0.26% 71.27% 58ms 1.35% PetscLogEventEndDefault 3ms 0.07% 71.34% 58ms 1.35% VecDot 9ms 0.21% 71.55% 57ms 1.33% PetscLogEventBeginDefault 3ms 0.07% 71.62% 56ms 1.30% VecDestroy 1ms 0.023% 71.64% 55ms 1.28% __GI___clock_gettime 1ms 0.023% 71.67% 54ms 1.26% VecDuplicate_MPI 4ms 0.093% 71.76% 54ms 1.26% VecMAXPY 54ms 1.26% 73.02% 54ms 1.26% [[vdso]] 54ms 1.26% 74.28% 54ms 1.26% [libchaste_heart.so] 0 0% 74.28% 51ms 1.19% VecDot_Seq 1ms 0.023% 74.30% 51ms 1.19% VecXDot_Seq_Private.constprop.0 49ms 1.14% 75.44% 49ms 1.14% __memcpy_avx_unaligned_erms 47ms 1.10% 76.54% 48ms 1.12% VecMDot_Seq 1ms 0.023% 76.56% 47ms 1.10% VecNorm 39ms 0.91% 77.47% 47ms 1.10% top12 (inline) 43ms 1.00% 78.47% 45ms 1.05% AbstractParameterisedSystem::SetAnyVariable 7ms 0.16% 78.63% 45ms 1.05% PetscMallocA 1ms 0.023% 78.66% 45ms 1.05% VecCreate 35ms 0.82% 79.47% 44ms 1.03% AbstractParameterisedSystem::GetAnyVariable 13ms 0.3% 79.78% 42ms 0.98% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 79.78% 42ms 0.98% AbstractBidomainSolver::FinaliseLinearSystem 5ms 0.12% 79.89% 42ms 0.98% VecAXPY 2ms 0.047% 79.94% 41ms 0.96% VecDuplicate_Seq 0 0% 79.94% 38ms 0.89% CxxTest::RealWorldDescription::setUp 0 0% 79.94% 38ms 0.89% PMPI_Init_thread 0 0% 79.94% 38ms 0.89% PetscInitialize 4ms 0.093% 80.03% 38ms 0.89% PetscMallocAlign (partial-inline) 0 0% 80.03% 38ms 0.89% PetscSetup::setUpWorld 0 0% 80.03% 38ms 0.89% PetscSetupUtils::CommonSetup 0 0% 80.03% 38ms 0.89% PetscSetupUtils::InitialisePetsc 0 0% 80.03% 38ms 0.89% ompi_mpi_init 0 0% 80.03% 37ms 0.86% VecNorm_Seq 0 0% 80.03% 36ms 0.84% PetscMemcpy (inline) 0 0% 80.03% 35ms 0.82% PetscTimeSubtract (inline) 4ms 0.093% 80.13% 33ms 0.77% 7ms 0.16% 80.29% 33ms 0.77% AbstractCardiacCell::GetVoltage (inline) 12ms 0.28% 80.57% 33ms 0.77% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 33ms 0.77% 81.34% 33ms 0.77% VecMAXPY_Seq 33ms 0.77% 82.11% 33ms 0.77% __ieee754_log_fma 32ms 0.75% 82.85% 32ms 0.75% TimeStepper::CalculateNextTime 0 0% 82.85% 29ms 0.68% VecCopy_Seq (partial-inline) 0 0% 82.85% 28ms 0.65% VecAXPY_Seq 28ms 0.65% 83.50% 28ms 0.65% asuint64 (inline) 25ms 0.58% 84.09% 27ms 0.63% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 1ms 0.023% 84.11% 26ms 0.61% PetscHeaderCreate_Private 26ms 0.61% 84.72% 26ms 0.61% daxpy_ 25ms 0.58% 85.30% 25ms 0.58% DistributedVector::Iterator::operator!= 3ms 0.07% 85.37% 25ms 0.58% PetscHeaderDestroy_Private 0 0% 85.37% 25ms 0.58% orte_init 23ms 0.54% 85.90% 23ms 0.54% __memset_avx2_unaligned_erms 0 0% 85.90% 22ms 0.51% PetscMemzero (inline) 1ms 0.023% 85.93% 22ms 0.51% VecCreate_MPI_Private 0 0% 85.93% 22ms 0.51% VecNorm_MPI 0 0% 85.93% 22ms 0.51% VecNorm_MPI_Default.constprop.0