File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 116903ms, 91.27% of 128089ms total Dropped 1175 nodes (cum <= 640.45ms) flat flat% sum% cum cum% 0 0% 0% 128075ms 100% __libc_start_call_main 0 0% 0% 128075ms 100% __libc_start_main_impl 0 0% 0% 128075ms 100% _start 0 0% 0% 128072ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 128072ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 128072ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 128072ms 100% main 0 0% 0% 128031ms 100% AbstractConvergenceTester::Converge 0 0% 0% 128031ms 100% CxxTest::RealTestDescription::run 0 0% 0% 128031ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 128031ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 128031ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 128031ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 4ms 0.0031% 0.0031% 126821ms 99.01% AbstractCardiacProblem::Solve 10ms 0.0078% 0.011% 125968ms 98.34% AbstractDynamicLinearPdeSolver::Solve 4ms 0.0031% 0.014% 69515ms 54.27% LinearSystem::Solve 5ms 0.0039% 0.018% 68996ms 53.87% KSPSolve 10ms 0.0078% 0.026% 68994ms 53.86% KSPSolve_Private 22ms 0.017% 0.043% 68643ms 53.59% KSPSolve_SYMMLQ 510ms 0.4% 0.44% 47026ms 36.71% AbstractCardiacTissue::SolveCellSystems 5ms 0.0039% 0.45% 39458ms 30.81% PCApply 4ms 0.0031% 0.45% 39443ms 30.79% PCApply_BJacobi_Singleblock 1ms 0.00078% 0.45% 36896ms 28.80% KSPSolve_PREONLY (partial-inline) 1060ms 0.83% 1.28% 36578ms 28.56% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0016% 1.28% 35801ms 27.95% PCApply_ICC 6ms 0.0047% 1.28% 35799ms 27.95% MatSolve 35385ms 27.63% 28.91% 35793ms 27.94% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 4ms 0.0031% 28.91% 33971ms 26.52% KSP_PCApply.lto_priv.18 7722ms 6.03% 34.94% 32234ms 25.17% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 8ms 0.0062% 34.95% 22924ms 17.90% MatMult 278ms 0.22% 35.16% 22916ms 17.89% MatMult_SeqAIJ (partial-inline) 22408ms 17.49% 52.66% 22912ms 17.89% MatMult_SeqAIJ_Inode (inline) 2310ms 1.80% 54.46% 16759ms 13.08% CardiacNewtonSolver::Solve 5498ms 4.29% 58.75% 9889ms 7.72% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1489ms 1.16% 59.92% 9293ms 7.26% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 246ms 0.19% 60.11% 9003ms 7.03% AbstractCardiacTissue::UpdateCaches (inline) 1717ms 1.34% 61.45% 8413ms 6.57% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1288ms 1.01% 62.45% 8270ms 6.46% BidomainSolver::SetupLinearSystem 7478ms 5.84% 68.29% 7478ms 5.84% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 0 0% 68.29% 7386ms 5.77% KSP_PCApply (partial-inline) 10ms 0.0078% 68.30% 6954ms 5.43% KSPConvergedDefault 4072ms 3.18% 71.48% 4183ms 3.27% __ieee754_log_fma 0 0% 71.48% 4121ms 3.22% boost::numeric::ublas::norm_inf (inline) 2837ms 2.21% 73.69% 4121ms 3.22% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 73.69% 4121ms 3.22% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 73.69% 4121ms 3.22% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3499ms 2.73% 76.42% 3499ms 2.73% ddot_ 12ms 0.0094% 76.43% 3322ms 2.59% MatNullSpaceRemove 33ms 0.026% 76.46% 3146ms 2.46% std::pow (inline) 384ms 0.3% 76.76% 3095ms 2.42% __pow 1997ms 1.56% 78.32% 3083ms 2.41% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2987ms 2.33% 80.65% 2987ms 2.33% __memcpy_avx_unaligned_erms 0 0% 80.65% 2961ms 2.31% PetscMemcpy (inline) 7ms 0.0055% 80.66% 2857ms 2.23% VecDot 1ms 0.00078% 80.66% 2850ms 2.23% VecDot_Seq 3ms 0.0023% 80.66% 2849ms 2.22% VecXDot_Seq_Private.constprop.0 359ms 0.28% 80.94% 2670ms 2.08% __ieee754_pow_fma 23ms 0.018% 80.96% 2609ms 2.04% VecCopy 6ms 0.0047% 80.96% 2581ms 2.02% VecCopy_Seq (partial-inline) 27ms 0.021% 80.98% 2408ms 1.88% VecAXPY 6ms 0.0047% 80.99% 2381ms 1.86% VecAXPY_Seq 2352ms 1.84% 82.82% 2352ms 1.84% daxpy_ 1ms 0.00078% 82.83% 2045ms 1.60% AbstractFeVolumeIntegralAssembler::DoAssemble 6ms 0.0047% 82.83% 2044ms 1.60% VecMDot 23ms 0.018% 82.85% 2038ms 1.59% VecMXDot_Private 2003ms 1.56% 84.41% 2011ms 1.57% VecMDot_Seq 16ms 0.012% 84.42% 1689ms 1.32% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1506ms 1.18% 85.60% 1565ms 1.22% exp_inline (inline) 0 0% 85.60% 1423ms 1.11% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 85.60% 1280ms 1% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.60% 1280ms 1% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.60% 1280ms 1% boost_numeric_ublas_abs (inline) 1280ms 1% 86.60% 1280ms 1% std::abs (inline) 6ms 0.0047% 86.60% 1266ms 0.99% VecMAXPY 1250ms 0.98% 87.58% 1260ms 0.98% VecMAXPY_Seq 770ms 0.6% 88.18% 1100ms 0.86% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 9ms 0.007% 88.19% 1100ms 0.86% boost::numeric::ublas::matrix_assign (inline) 243ms 0.19% 88.38% 1087ms 0.85% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.38% 1037ms 0.81% CuboidMeshConstructor::Construct 0 0% 88.38% 1035ms 0.81% AbstractTetrahedralMesh::ConstructRegularSlabMesh 3ms 0.0023% 88.38% 1035ms 0.81% DistributedTetrahedralMesh::ConstructCuboid 2ms 0.0016% 88.38% 1013ms 0.79% KSP_RemoveNullSpace (inline) 1004ms 0.78% 89.17% 1004ms 0.78% [libchaste_heart.so] 5ms 0.0039% 89.17% 961ms 0.75% VecNorm 1ms 0.00078% 89.17% 949ms 0.74% VecNorm_Seq 1ms 0.00078% 89.17% 926ms 0.72% Element::Element 910ms 0.71% 89.88% 910ms 0.71% __memset_avx2_unaligned_erms 0 0% 89.88% 899ms 0.7% PetscMemzero (inline) 9ms 0.007% 89.89% 877ms 0.68% AbstractTetrahedralElement::CalculateJacobian 7ms 0.0055% 89.89% 861ms 0.67% BidomainAssembler::ComputeMatrixTerm 1ms 0.00078% 89.89% 840ms 0.66% AbstractTetrahedralElement::AbstractTetrahedralElement 5ms 0.0039% 89.90% 840ms 0.66% boost::numeric::ublas::c_matrix::c_matrix (inline) 10ms 0.0078% 89.91% 815ms 0.64% VecScale 1ms 0.00078% 89.91% 805ms 0.63% VecScale_Seq 801ms 0.63% 90.53% 801ms 0.63% dscal_ 0 0% 90.53% 775ms 0.61% VecDuplicate 2ms 0.0016% 90.53% 768ms 0.6% BidomainProblem::WriteOneStep 1ms 0.00078% 90.53% 759ms 0.59% AbstractBidomainSolver::FinaliseLinearSystem 237ms 0.19% 90.72% 755ms 0.59% AbstractBidomainSolver::CheckCompatibilityCondition 700ms 0.55% 91.27% 700ms 0.55% log_inline (inline) 0 0% 91.27% 642ms 0.5% VecNorm_MPI 1ms 0.00078% 91.27% 642ms 0.5% VecNorm_MPI_Default.constprop.0