File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12675ms, 84.95% of 14920ms total Dropped 772 nodes (cum <= 74.60ms) flat flat% sum% cum cum% 0 0% 0% 14912ms 99.95% __libc_start_call_main 0 0% 0% 14912ms 99.95% __libc_start_main_impl 0 0% 0% 14912ms 99.95% _start 0 0% 0% 14910ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14910ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14910ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14910ms 99.93% main 0 0% 0% 14871ms 99.67% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14871ms 99.67% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14871ms 99.67% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0067% 0.0067% 14848ms 99.52% AbstractCardiacProblem::Solve 0 0% 0.0067% 11145ms 74.70% AbstractDynamicLinearPdeSolver::Solve 43ms 0.29% 0.29% 8830ms 59.18% AbstractCardiacTissue::SolveCellSystems 130ms 0.87% 1.17% 5585ms 37.43% AbstractCardiacCell::ComputeExceptVoltage 158ms 1.06% 2.23% 4908ms 32.90% AbstractOneStepIvpOdeSolver::InternalSolve 191ms 1.28% 3.51% 4218ms 28.27% EulerIvpOdeSolver::CalculateNextYValue 916ms 6.14% 9.64% 3985ms 26.71% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1811ms 12.14% 21.78% 3634ms 24.36% __GI___exp 1ms 0.0067% 21.79% 3633ms 24.35% MonodomainProblem::WriteOneStep 2ms 0.013% 21.80% 3464ms 23.22% Hdf5DataWriter::PutVector 0 0% 21.80% 3446ms 23.10% H5Dwrite 2ms 0.013% 21.82% 3413ms 22.88% H5D__write 63ms 0.42% 22.24% 2544ms 17.05% AbstractCardiacTissue::UpdateCaches (inline) 821ms 5.50% 27.74% 2422ms 16.23% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.013% 27.75% 1937ms 12.98% H5D__chunk_collective_write 17ms 0.11% 27.87% 1935ms 12.97% H5F_set_coll_metadata_reads 1612ms 10.80% 38.67% 1752ms 11.74% __ieee754_exp_fma 20ms 0.13% 38.81% 1698ms 11.38% H5FD_s3comms_uriencode 2ms 0.013% 38.82% 1554ms 10.42% LinearSystem::Solve 0 0% 38.82% 1404ms 9.41% KSPSolve 0 0% 38.82% 1404ms 9.41% KSPSolve_Private 4ms 0.027% 38.85% 1394ms 9.34% KSPSolve_CG 6ms 0.04% 38.89% 1356ms 9.09% H5D__chunk_cacheable 1ms 0.0067% 38.89% 1318ms 8.83% H5F_block_write 2ms 0.013% 38.91% 1317ms 8.83% H5PB_write 2ms 0.013% 38.92% 1314ms 8.81% H5F__accum_write 0 0% 38.92% 1312ms 8.79% H5FD_write 59ms 0.4% 39.32% 1306ms 8.75% 3ms 0.02% 39.34% 1217ms 8.16% H5D__mpio_select_write 358ms 2.40% 41.74% 1171ms 7.85% H5S_select_iterate 2ms 0.013% 41.75% 1103ms 7.39% PMPI_File_write_at_all 1057ms 7.08% 48.83% 1060ms 7.10% __GI_pwritev64 77ms 0.52% 49.35% 841ms 5.64% H5D__chunk_set_sizes 6ms 0.04% 49.39% 802ms 5.38% std::pow (inline) 71ms 0.48% 49.87% 796ms 5.34% __pow 0 0% 49.87% 771ms 5.17% PCApply 2ms 0.013% 49.88% 767ms 5.14% PCApply_BJacobi_Singleblock 324ms 2.17% 52.05% 734ms 4.92% MonodomainSolver::SetupLinearSystem 0 0% 52.05% 721ms 4.83% KSPSolve_PREONLY 85ms 0.57% 52.62% 721ms 4.83% __ieee754_pow_fma 2ms 0.013% 52.63% 720ms 4.83% PCApply_ICC 2ms 0.013% 52.65% 718ms 4.81% MatSolve 711ms 4.77% 57.41% 716ms 4.80% MatSolve_SeqSBAIJ_1_NaturalOrdering 5ms 0.034% 57.45% 615ms 4.12% MatMult 607ms 4.07% 61.51% 610ms 4.09% MatMult_SeqAIJ 1ms 0.0067% 61.52% 563ms 3.77% KSP_PCApply.lto_priv.7 259ms 1.74% 63.26% 533ms 3.57% CellLuoRudy1991FromCellML::VerifyStateVariables 39ms 0.26% 63.52% 455ms 3.05% H5S_mpio_space_type 13ms 0.087% 63.61% 412ms 2.76% H5VM_chunk_index 341ms 2.29% 65.89% 341ms 2.29% log_inline (inline) 315ms 2.11% 68.00% 315ms 2.11% H5VM_array_offset_pre 1ms 0.0067% 68.01% 285ms 1.91% KSPConvergedDefault 273ms 1.83% 69.84% 274ms 1.84% exp_inline (inline) 136ms 0.91% 70.75% 265ms 1.78% TimeStepper::TimeStepper 50ms 0.34% 71.09% 214ms 1.43% __GI___libc_malloc 173ms 1.16% 72.25% 214ms 1.43% _int_malloc 39ms 0.26% 72.51% 213ms 1.43% __GI___libc_free 0 0% 72.51% 209ms 1.40% KSP_PCApply 12ms 0.08% 72.59% 205ms 1.37% ompi_datatype_destroy 9ms 0.06% 72.65% 197ms 1.32% ompi_datatype_create 4ms 0.027% 72.67% 193ms 1.29% MPI_Type_free 184ms 1.23% 73.91% 184ms 1.23% [libchaste_heart.so] 8ms 0.054% 73.96% 178ms 1.19% ompi_info_register_framework_params 41ms 0.27% 74.24% 177ms 1.19% ompi_datatype_release_args 69ms 0.46% 74.70% 174ms 1.17% _int_free 1ms 0.0067% 74.71% 168ms 1.13% Hdf5DataWriter::PutUnlimitedVariable 85ms 0.57% 75.27% 166ms 1.11% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 96ms 0.64% 75.92% 158ms 1.06% top12 (inline) 127ms 0.85% 76.77% 155ms 1.04% AbstractOneStepIvpOdeSolver::Solve 117ms 0.78% 77.55% 139ms 0.93% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 136ms 0.91% 78.47% 136ms 0.91% ddot_ 1ms 0.0067% 78.47% 134ms 0.9% VecDuplicate 9ms 0.06% 78.53% 133ms 0.89% VecDuplicate_MPI 130ms 0.87% 79.40% 130ms 0.87% TimeStepper::CalculateNextTime 15ms 0.1% 79.50% 125ms 0.84% H5S_set_version 123ms 0.82% 80.33% 123ms 0.82% std::isinf (inline) 1ms 0.0067% 80.34% 118ms 0.79% PMPI_File_set_view 43ms 0.29% 80.62% 110ms 0.74% H5VM_array_calc 1ms 0.0067% 80.63% 102ms 0.68% VecNorm 40ms 0.27% 80.90% 102ms 0.68% std::__cxx11::basic_string::basic_string 23ms 0.15% 81.05% 98ms 0.66% __libc_calloc 2ms 0.013% 81.07% 97ms 0.65% PMPI_Type_create_resized 0 0% 81.07% 96ms 0.64% VecNorm_Seq 96ms 0.64% 81.71% 96ms 0.64% __ieee754_log_fma 21ms 0.14% 81.85% 95ms 0.64% AbstractCardiacCell::SetVoltage (partial-inline) 1ms 0.0067% 81.86% 93ms 0.62% ompi_datatype_duplicate 91ms 0.61% 82.47% 91ms 0.61% __memcpy_avx_unaligned_erms 47ms 0.32% 82.78% 86ms 0.58% H5S_hyper_add_span_element 86ms 0.58% 83.36% 86ms 0.58% H5VM_chunk_index_scaled 3ms 0.02% 83.38% 86ms 0.58% PMPI_Type_vector 3ms 0.02% 83.40% 86ms 0.58% opal_datatype_create_desc 15ms 0.1% 83.50% 85ms 0.57% opal_dss_print_buffer_contents 0 0% 83.50% 83ms 0.56% H5D__chunk_allocated 0 0% 83.50% 81ms 0.54% H5D__select_write 0 0% 83.50% 81ms 0.54% H5Dgather 2ms 0.013% 83.51% 79ms 0.53% H5D__contig_fill 33ms 0.22% 83.73% 79ms 0.53% H5S_select_iter_next 58ms 0.39% 84.12% 77ms 0.52% AbstractParameterisedSystem::GetAnyVariable 1ms 0.0067% 84.13% 77ms 0.52% H5VM_opvv 77ms 0.52% 84.64% 77ms 0.52% [libm.so.6] 1ms 0.0067% 84.65% 76ms 0.51% H5D__contig_write 45ms 0.3% 84.95% 75ms 0.5% AbstractCardiacCell::GetVoltage (partial-inline)