File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 428ms, 88.43% of 484ms total Dropped 200 nodes (cum <= 2.42ms) flat flat% sum% cum cum% 0 0% 0% 474ms 97.93% __libc_start_call_main 0 0% 0% 474ms 97.93% __libc_start_main_impl 0 0% 0% 474ms 97.93% _start 0 0% 0% 470ms 97.11% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 470ms 97.11% CxxTest::TestRunner::runAllTests 0 0% 0% 470ms 97.11% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 470ms 97.11% main 0 0% 0% 430ms 88.84% CxxTest::RealTestDescription::run 0 0% 0% 430ms 88.84% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 430ms 88.84% CxxTest::TestRunner::runTest (inline) 0 0% 0% 430ms 88.84% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 430ms 88.84% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 426ms 88.02% AbstractCardiacProblem::Solve 0 0% 0% 423ms 87.40% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 377ms 77.89% LinearSystem::Solve 0 0% 0% 375ms 77.48% KSPSolve 0 0% 0% 375ms 77.48% KSPSolve_Private 0 0% 0% 374ms 77.27% KSPSolve_CG 1ms 0.21% 0.21% 227ms 46.90% KSP_PCApply.lto_priv.7 0 0% 0.21% 211ms 43.60% PCApply 0 0% 0.21% 211ms 43.60% PCApply_BJacobi_Singleblock 0 0% 0.21% 187ms 38.64% KSPSolve_PREONLY (partial-inline) 0 0% 0.21% 171ms 35.33% MatSolve 170ms 35.12% 35.33% 171ms 35.33% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 35.33% 171ms 35.33% PCApply_ICC 67ms 13.84% 49.17% 67ms 13.84% ddot_ 0 0% 49.17% 61ms 12.60% MatMult 0 0% 49.17% 61ms 12.60% MatMult_SeqAIJ 61ms 12.60% 61.78% 61ms 12.60% MatMult_SeqAIJ_Inode (inline) 1ms 0.21% 61.98% 44ms 9.09% MatNullSpaceRemove 0 0% 61.98% 43ms 8.88% VecTDot 0 0% 61.98% 43ms 8.88% VecTDot_Seq 0 0% 61.98% 43ms 8.88% VecXDot_Seq_Private.constprop.0 2ms 0.41% 62.40% 39ms 8.06% AbstractCardiacTissue::SolveCellSystems 0 0% 62.40% 37ms 7.64% CxxTest::RealWorldDescription::setUp 0 0% 62.40% 37ms 7.64% PMPI_Init_thread 0 0% 62.40% 37ms 7.64% PetscInitialize 0 0% 62.40% 37ms 7.64% PetscSetup::setUpWorld 0 0% 62.40% 37ms 7.64% PetscSetupUtils::CommonSetup 0 0% 62.40% 37ms 7.64% PetscSetupUtils::InitialisePetsc 0 0% 62.40% 37ms 7.64% ompi_mpi_init 2ms 0.41% 62.81% 35ms 7.23% 2ms 0.41% 63.22% 29ms 5.99% AbstractCardiacCell::ComputeExceptVoltage 0 0% 63.22% 26ms 5.37% VecMDot 26ms 5.37% 68.60% 26ms 5.37% VecMDot_Seq 0 0% 68.60% 26ms 5.37% VecMXDot_Private 0 0% 68.60% 24ms 4.96% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 68.60% 24ms 4.96% VecNorm 0 0% 68.60% 24ms 4.96% VecNorm_Seq 0 0% 68.60% 21ms 4.34% orte_init 2ms 0.41% 69.01% 20ms 4.13% EulerIvpOdeSolver::CalculateNextYValue 9ms 1.86% 70.87% 18ms 3.72% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 70.87% 18ms 3.72% mca_base_framework_open 0 0% 70.87% 17ms 3.51% VecMAXPY 17ms 3.51% 74.38% 17ms 3.51% VecMAXPY_Seq 0 0% 74.38% 16ms 3.31% KSP_PCApply (partial-inline) 0 0% 74.38% 16ms 3.31% _dl_init 0 0% 74.38% 16ms 3.31% call_init (inline) 0 0% 74.38% 16ms 3.31% mca_base_framework_components_register 0 0% 74.38% 16ms 3.31% mca_base_framework_register 0 0% 74.38% 15ms 3.10% VecAYPX 15ms 3.10% 77.48% 15ms 3.10% VecAYPX_Seq 0 0% 77.48% 14ms 2.89% __GI__dl_catch_exception 0 0% 77.48% 14ms 2.89% ___dlopen 0 0% 77.48% 14ms 2.89% _dl_catch_error 0 0% 77.48% 14ms 2.89% _dl_open 0 0% 77.48% 14ms 2.89% _dlerror_run 0 0% 77.48% 14ms 2.89% dl_open_worker 0 0% 77.48% 14ms 2.89% dlopen_doit 0 0% 77.48% 14ms 2.89% dlopen_implementation (inline) 0 0% 77.48% 14ms 2.89% mca_base_component_find 0 0% 77.48% 14ms 2.89% mca_base_component_repository_open 0 0% 77.48% 14ms 2.89% opal_stackframe_output 0 0% 77.48% 13ms 2.69% hwloc_topology_load 0 0% 77.48% 12ms 2.48% hwloc_linux_get_tid_last_cpu_location 4ms 0.83% 78.31% 10ms 2.07% __GI___exp 0 0% 78.31% 10ms 2.07% mca_base_framework_components_open 0 0% 78.31% 10ms 2.07% mca_topo_base_dist_graph_neighbors_count 0 0% 78.31% 8ms 1.65% AbstractCardiacTissue::UpdateCaches (inline) 3ms 0.62% 78.93% 8ms 1.65% CellLuoRudy1991FromCellML::GetIIonic 0 0% 78.93% 8ms 1.65% _dl_start_user 1ms 0.21% 79.13% 7ms 1.45% PetscMallocA 0 0% 79.13% 7ms 1.45% VecDuplicate 7ms 1.45% 80.58% 7ms 1.45% __GI___clock_nanosleep 0 0% 80.58% 7ms 1.45% __GI___nanosleep 2ms 0.41% 80.99% 7ms 1.45% boost::serialization::singleton::get_instance 0 0% 80.99% 7ms 1.45% usleep 0 0% 80.99% 6ms 1.24% BidomainSolver::SetupLinearSystem 0 0% 80.99% 6ms 1.24% PetscMallocAlign 0 0% 80.99% 6ms 1.24% VecDuplicate_Seq 4ms 0.83% 81.82% 6ms 1.24% __ieee754_exp_fma 6ms 1.24% 83.06% 6ms 1.24% __memcpy_avx_unaligned_erms 0 0% 83.06% 6ms 1.24% dl_open_worker_begin 1ms 0.21% 83.26% 5ms 1.03% VecAXPY 0 0% 83.26% 5ms 1.03% VecSetType 0 0% 83.26% 5ms 1.03% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 1ms 0.21% 83.47% 5ms 1.03% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 83.47% 5ms 1.03% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 83.47% 5ms 1.03% opal_hwloc_base_get_topology 0 0% 83.47% 5ms 1.03% orte_ess_base_proc_binding 0 0% 83.47% 4ms 0.83% AbstractCardiacProblem::Initialise 0 0% 83.47% 4ms 0.83% PetscMemcpy (inline) 0 0% 83.47% 4ms 0.83% VecAXPY_Seq 0 0% 83.47% 4ms 0.83% VecCreate_Seq 0 0% 83.47% 4ms 0.83% VecDestroy 1ms 0.21% 83.68% 4ms 0.83% __GI___libc_malloc 0 0% 83.68% 4ms 0.83% __GI_exit 1ms 0.21% 83.88% 4ms 0.83% __cxa_finalize 4ms 0.83% 84.71% 4ms 0.83% __libc_openat64 1ms 0.21% 84.92% 4ms 0.83% __posix_memalign 0 0% 84.92% 4ms 0.83% __run_exit_handlers 0 0% 84.92% 4ms 0.83% _dl_call_fini 0 0% 84.92% 4ms 0.83% _dl_fini 0 0% 84.92% 4ms 0.83% _dl_lookup_symbol_x 0 0% 84.92% 4ms 0.83% _dl_open_relocate_one_object (inline) 0 0% 84.92% 4ms 0.83% _dl_relocate_object 4ms 0.83% 85.74% 4ms 0.83% daxpy_ 4ms 0.83% 86.57% 4ms 0.83% do_lookup_x 0 0% 86.57% 3ms 0.62% CxxTest::RealWorldDescription::tearDown 0 0% 86.57% 3ms 0.62% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 86.57% 3ms 0.62% PetscFinalize 0 0% 86.57% 3ms 0.62% PetscSetup::tearDownWorld 0 0% 86.57% 3ms 0.62% PetscSetupUtils::CommonFinalize 0 0% 86.57% 3ms 0.62% XOpenDisplay 0 0% 86.57% 3ms 0.62% [hwloc_gl.so] 0 0% 86.57% 3ms 0.62% [libxcb.so.1.1.0] 0 0% 86.57% 3ms 0.62% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 86.57% 3ms 0.62% _XConnectXCB 3ms 0.62% 87.19% 3ms 0.62% __GI___libc_read 1ms 0.21% 87.40% 3ms 0.62% __ieee754_pow_fma 3ms 0.62% 88.02% 3ms 0.62% __libc_connect 0 0% 88.02% 3ms 0.62% __pow 1ms 0.21% 88.22% 3ms 0.62% _dl_runtime_resolve_xsavec 0 0% 88.22% 3ms 0.62% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 1ms 0.21% 88.43% 3ms 0.62% boost::serialization::void_cast_detail::void_caster::recursive_unregister 0 0% 88.43% 3ms 0.62% boost::serialization::void_cast_detail::void_caster_primitive::~void_caster_primitive (inline) 0 0% 88.43% 3ms 0.62% elf_dynamic_do_Rela (inline) 0 0% 88.43% 3ms 0.62% elf_machine_rela (inline) 0 0% 88.43% 3ms 0.62% mca_base_var_group_register 0 0% 88.43% 3ms 0.62% mca_base_var_register 0 0% 88.43% 3ms 0.62% ompi_mpi_finalize 0 0% 88.43% 3ms 0.62% resolve_map (inline) 0 0% 88.43% 3ms 0.62% std::pow (inline) 0 0% 88.43% 3ms 0.62% xcb_connect_to_display_with_auth_info