File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12389ms, 84.51% of 14659ms total Dropped 763 nodes (cum <= 73.30ms) flat flat% sum% cum cum% 0 0% 0% 14651ms 99.95% __libc_start_call_main 0 0% 0% 14651ms 99.95% __libc_start_main_impl 0 0% 0% 14651ms 99.95% _start 0 0% 0% 14648ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14648ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14648ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14648ms 99.92% main 0 0% 0% 14608ms 99.65% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14608ms 99.65% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14608ms 99.65% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.014% 0.014% 14585ms 99.50% AbstractCardiacProblem::Solve 0 0% 0.014% 11228ms 76.59% AbstractDynamicLinearPdeSolver::Solve 98ms 0.67% 0.68% 8834ms 60.26% AbstractCardiacTissue::SolveCellSystems 107ms 0.73% 1.41% 5283ms 36.04% AbstractCardiacCell::ComputeExceptVoltage 107ms 0.73% 2.14% 4652ms 31.73% AbstractOneStepIvpOdeSolver::InternalSolve 169ms 1.15% 3.29% 3986ms 27.19% EulerIvpOdeSolver::CalculateNextYValue 780ms 5.32% 8.62% 3785ms 25.82% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1800ms 12.28% 20.90% 3556ms 24.26% __GI___exp 2ms 0.014% 20.91% 3298ms 22.50% MonodomainProblem::WriteOneStep 6ms 0.041% 20.95% 3142ms 21.43% Hdf5DataWriter::PutVector 1ms 0.0068% 20.96% 3126ms 21.32% H5Dwrite 2ms 0.014% 20.97% 3094ms 21.11% H5D__write 96ms 0.65% 21.62% 2817ms 19.22% AbstractCardiacTissue::UpdateCaches (inline) 787ms 5.37% 26.99% 2617ms 17.85% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.014% 27.01% 1867ms 12.74% H5D__chunk_collective_write 6ms 0.041% 27.05% 1865ms 12.72% H5F_set_coll_metadata_reads 1340ms 9.14% 36.19% 1694ms 11.56% __ieee754_exp_fma 16ms 0.11% 36.30% 1661ms 11.33% H5FD_s3comms_uriencode 3ms 0.02% 36.32% 1570ms 10.71% LinearSystem::Solve 0 0% 36.32% 1455ms 9.93% KSPSolve 3ms 0.02% 36.34% 1455ms 9.93% KSPSolve_Private 3ms 0.02% 36.36% 1449ms 9.88% KSPSolve_CG 40ms 0.27% 36.63% 1347ms 9.19% 3ms 0.02% 36.65% 1340ms 9.14% H5F_block_write 4ms 0.027% 36.68% 1337ms 9.12% H5PB_write 2ms 0.014% 36.69% 1333ms 9.09% H5F__accum_write 0 0% 36.69% 1331ms 9.08% H5FD_write 2ms 0.014% 36.71% 1248ms 8.51% H5D__mpio_select_write 0 0% 36.71% 1168ms 7.97% PMPI_File_write_at_all 1144ms 7.80% 44.51% 1148ms 7.83% __GI_pwritev64 6ms 0.041% 44.55% 1105ms 7.54% H5D__chunk_cacheable 3ms 0.02% 44.57% 963ms 6.57% std::pow (inline) 109ms 0.74% 45.32% 959ms 6.54% __pow 310ms 2.11% 47.43% 949ms 6.47% H5S_select_iterate 0 0% 47.43% 854ms 5.83% PCApply 1ms 0.0068% 47.44% 853ms 5.82% PCApply_BJacobi_Singleblock 77ms 0.53% 47.96% 850ms 5.80% __ieee754_pow_fma 1ms 0.0068% 47.97% 827ms 5.64% KSPSolve_PREONLY 1ms 0.0068% 47.98% 824ms 5.62% MatSolve 0 0% 47.98% 824ms 5.62% PCApply_ICC 813ms 5.55% 53.52% 823ms 5.61% MatSolve_SeqSBAIJ_1_NaturalOrdering 411ms 2.80% 56.33% 803ms 5.48% MonodomainSolver::SetupLinearSystem 71ms 0.48% 56.81% 644ms 4.39% H5D__chunk_set_sizes 1ms 0.0068% 56.82% 548ms 3.74% KSP_PCApply.lto_priv.7 3ms 0.02% 56.84% 486ms 3.32% MatMult 481ms 3.28% 60.12% 483ms 3.29% MatMult_SeqAIJ 210ms 1.43% 61.55% 417ms 2.84% CellLuoRudy1991FromCellML::VerifyStateVariables 65ms 0.44% 62.00% 414ms 2.82% H5S_mpio_space_type 405ms 2.76% 64.76% 405ms 2.76% log_inline (inline) 2ms 0.014% 64.77% 385ms 2.63% KSPConvergedDefault 320ms 2.18% 66.96% 327ms 2.23% exp_inline (inline) 1ms 0.0068% 66.96% 311ms 2.12% KSP_PCApply 225ms 1.53% 68.50% 282ms 1.92% top12 (inline) 263ms 1.79% 70.29% 263ms 1.79% [libchaste_heart.so] 96ms 0.65% 70.95% 247ms 1.68% TimeStepper::TimeStepper 12ms 0.082% 71.03% 203ms 1.38% H5VM_chunk_index 188ms 1.28% 72.31% 188ms 1.28% ddot_ 8ms 0.055% 72.37% 186ms 1.27% MPI_Type_free 11ms 0.075% 72.44% 185ms 1.26% ompi_datatype_destroy 37ms 0.25% 72.69% 182ms 1.24% __GI___libc_malloc 177ms 1.21% 73.90% 177ms 1.21% asuint64 (inline) 143ms 0.98% 74.88% 176ms 1.20% _int_malloc 50ms 0.34% 75.22% 175ms 1.19% AbstractCardiacCell::SetVoltage (partial-inline) 32ms 0.22% 75.43% 172ms 1.17% __GI___libc_free 7ms 0.048% 75.48% 160ms 1.09% ompi_info_register_framework_params 38ms 0.26% 75.74% 158ms 1.08% ompi_datatype_release_args 114ms 0.78% 76.52% 155ms 1.06% AbstractOneStepIvpOdeSolver::Solve 2ms 0.014% 76.53% 154ms 1.05% Hdf5DataWriter::PutUnlimitedVariable 145ms 0.99% 77.52% 145ms 0.99% TimeStepper::CalculateNextTime 5ms 0.034% 77.56% 144ms 0.98% ompi_datatype_create 53ms 0.36% 77.92% 140ms 0.96% _int_free 35ms 0.24% 78.16% 134ms 0.91% H5S_set_version 111ms 0.76% 78.91% 133ms 0.91% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 60ms 0.41% 79.32% 125ms 0.85% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 58ms 0.4% 79.72% 123ms 0.84% H5S_hyper_add_span_element 119ms 0.81% 80.53% 119ms 0.81% H5VM_chunk_index_scaled 117ms 0.8% 81.33% 117ms 0.8% __ieee754_log_fma 2ms 0.014% 81.34% 110ms 0.75% VecNorm 110ms 0.75% 82.09% 110ms 0.75% __memcpy_avx_unaligned_erms 1ms 0.0068% 82.10% 108ms 0.74% VecTDot 1ms 0.0068% 82.11% 107ms 0.73% VecNorm_Seq 0 0% 82.11% 107ms 0.73% VecTDot_Seq 0 0% 82.11% 107ms 0.73% VecXDot_Seq_Private.constprop.0 78ms 0.53% 82.64% 99ms 0.68% AbstractParameterisedSystem::SetAnyVariable 32ms 0.22% 82.86% 99ms 0.68% H5VM_array_calc 1ms 0.0068% 82.86% 99ms 0.68% PMPI_File_set_view 0 0% 82.86% 95ms 0.65% VecDuplicate 4ms 0.027% 82.89% 95ms 0.65% VecDuplicate_MPI 65ms 0.44% 83.33% 91ms 0.62% AbstractParameterisedSystem::GetAnyVariable 31ms 0.21% 83.55% 84ms 0.57% AbstractCardiacCell::GetVoltage (partial-inline) 83ms 0.57% 84.11% 83ms 0.57% ReplicatableVector::operator[] 1ms 0.0068% 84.12% 81ms 0.55% PMPI_Type_create_resized 1ms 0.0068% 84.13% 81ms 0.55% ompi_datatype_duplicate 2ms 0.014% 84.14% 79ms 0.54% H5D__chunk_allocated 45ms 0.31% 84.45% 79ms 0.54% TimeStepper::AdvanceOneTimeStep 0 0% 84.45% 79ms 0.54% std::vector::_M_assign_aux (inline) 0 0% 84.45% 79ms 0.54% std::vector::assign (inline) 0 0% 84.45% 78ms 0.53% H5Pcreate 10ms 0.068% 84.51% 77ms 0.53% H5P_create_id