File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 348ms, 90.62% of 384ms total Dropped 137 nodes (cum <= 1.92ms) flat flat% sum% cum cum% 0 0% 0% 377ms 98.18% __libc_start_call_main 0 0% 0% 377ms 98.18% __libc_start_main_impl 0 0% 0% 377ms 98.18% _start 0 0% 0% 375ms 97.66% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 375ms 97.66% CxxTest::TestRunner::runAllTests 0 0% 0% 375ms 97.66% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 375ms 97.66% main 0 0% 0% 335ms 87.24% CxxTest::RealTestDescription::run 0 0% 0% 335ms 87.24% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 335ms 87.24% CxxTest::TestRunner::runTest (inline) 0 0% 0% 335ms 87.24% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 335ms 87.24% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 331ms 86.20% AbstractCardiacProblem::Solve 0 0% 0% 327ms 85.16% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 297ms 77.34% LinearSystem::Solve 0 0% 0% 295ms 76.82% KSPSolve 1ms 0.26% 0.26% 295ms 76.82% KSPSolve_CG 0 0% 0.26% 295ms 76.82% KSPSolve_Private 0 0% 0.26% 158ms 41.15% KSP_PCApply.lto_priv.7 0 0% 0.26% 148ms 38.54% PCApply 0 0% 0.26% 148ms 38.54% PCApply_BJacobi_Singleblock 0 0% 0.26% 130ms 33.85% KSPSolve_PREONLY (partial-inline) 0 0% 0.26% 120ms 31.25% MatSolve 118ms 30.73% 30.99% 120ms 31.25% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 30.99% 120ms 31.25% PCApply_ICC 0 0% 30.99% 65ms 16.93% MatMult 0 0% 30.99% 65ms 16.93% MatMult_SeqAIJ 65ms 16.93% 47.92% 65ms 16.93% MatMult_SeqAIJ_Inode (inline) 54ms 14.06% 61.98% 54ms 14.06% ddot_ 0 0% 61.98% 37ms 9.64% CxxTest::RealWorldDescription::setUp 0 0% 61.98% 37ms 9.64% PetscInitialize 0 0% 61.98% 37ms 9.64% PetscSetup::setUpWorld 0 0% 61.98% 37ms 9.64% PetscSetupUtils::CommonSetup 0 0% 61.98% 37ms 9.64% PetscSetupUtils::InitialisePetsc 0 0% 61.98% 36ms 9.38% PMPI_Init_thread 0 0% 61.98% 36ms 9.38% ompi_mpi_init 2ms 0.52% 62.50% 32ms 8.33% 0 0% 62.50% 31ms 8.07% VecTDot 0 0% 62.50% 31ms 8.07% VecTDot_Seq 0 0% 62.50% 31ms 8.07% VecXDot_Seq_Private.constprop.0 0 0% 62.50% 26ms 6.77% orte_init 1ms 0.26% 62.76% 25ms 6.51% MatNullSpaceRemove 0 0% 62.76% 23ms 5.99% AbstractCardiacTissue::SolveCellSystems 0 0% 62.76% 23ms 5.99% VecNorm 0 0% 62.76% 23ms 5.99% VecNorm_Seq 0 0% 62.76% 19ms 4.95% hwloc_topology_load 0 0% 62.76% 18ms 4.69% hwloc_linux_get_tid_last_cpu_location 0 0% 62.76% 16ms 4.17% VecMDot 16ms 4.17% 66.93% 16ms 4.17% VecMDot_Seq 0 0% 66.93% 16ms 4.17% VecMXDot_Private 0 0% 66.93% 13ms 3.39% __GI__dl_catch_exception 0 0% 66.93% 13ms 3.39% _dl_catch_error 0 0% 66.93% 13ms 3.39% _dlerror_run 0 0% 66.93% 13ms 3.39% mca_base_framework_open 0 0% 66.93% 12ms 3.12% mca_base_framework_components_register 0 0% 66.93% 12ms 3.12% mca_base_framework_register 0 0% 66.93% 12ms 3.12% opal_stackframe_output 0 0% 66.93% 11ms 2.86% AbstractCardiacCell::ComputeExceptVoltage 0 0% 66.93% 10ms 2.60% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 66.93% 10ms 2.60% EulerIvpOdeSolver::CalculateNextYValue 0 0% 66.93% 10ms 2.60% KSP_PCApply (partial-inline) 0 0% 66.93% 10ms 2.60% VecAYPX 10ms 2.60% 69.53% 10ms 2.60% VecAYPX_Seq 0 0% 69.53% 9ms 2.34% AbstractCardiacTissue::UpdateCaches (inline) 3ms 0.78% 70.31% 9ms 2.34% CellLuoRudy1991FromCellML::EvaluateYDerivatives 3ms 0.78% 71.09% 9ms 2.34% CellLuoRudy1991FromCellML::GetIIonic 8ms 2.08% 73.18% 9ms 2.34% __GI___libc_read 0 0% 73.18% 9ms 2.34% ___dlopen 0 0% 73.18% 9ms 2.34% _dl_open 0 0% 73.18% 9ms 2.34% dl_open_worker 0 0% 73.18% 9ms 2.34% dlopen_doit 0 0% 73.18% 9ms 2.34% dlopen_implementation (inline) 0 0% 73.18% 8ms 2.08% VecMAXPY 8ms 2.08% 75.26% 8ms 2.08% VecMAXPY_Seq 5ms 1.30% 76.56% 8ms 2.08% __GI___exp 0 0% 76.56% 8ms 2.08% _dl_init 0 0% 76.56% 8ms 2.08% call_init (inline) 0 0% 76.56% 8ms 2.08% mca_base_component_find 0 0% 76.56% 8ms 2.08% mca_base_component_repository_open 0 0% 76.56% 8ms 2.08% opal_hwloc_base_get_topology 0 0% 76.56% 8ms 2.08% orte_ess_base_proc_binding 3ms 0.78% 77.34% 7ms 1.82% BidomainSolver::SetupLinearSystem 0 0% 77.34% 7ms 1.82% dl_open_worker_begin 0 0% 77.34% 6ms 1.56% VecAXPY 0 0% 77.34% 6ms 1.56% VecAXPY_Seq 0 0% 77.34% 6ms 1.56% VecDuplicate 0 0% 77.34% 6ms 1.56% VecDuplicate_Seq 0 0% 77.34% 6ms 1.56% _dl_map_object 0 0% 77.34% 6ms 1.56% _dl_start_user 6ms 1.56% 78.91% 6ms 1.56% daxpy_ 0 0% 78.91% 5ms 1.30% PetscMemcpy (inline) 0 0% 78.91% 5ms 1.30% VecCreate_Seq 0 0% 78.91% 5ms 1.30% VecSetType 5ms 1.30% 80.21% 5ms 1.30% __memcpy_avx512_unaligned_erms 0 0% 80.21% 4ms 1.04% XOpenDisplay 0 0% 80.21% 4ms 1.04% [hwloc_gl.so] 0 0% 80.21% 4ms 1.04% [libxcb.so.1.1.0] 0 0% 80.21% 4ms 1.04% _XConnectXCB 0 0% 80.21% 4ms 1.04% __dlclose 0 0% 80.21% 4ms 1.04% _dl_close 1ms 0.26% 80.47% 4ms 1.04% _dl_close_worker (inline) 2ms 0.52% 80.99% 4ms 1.04% _dl_fixup 0 0% 80.99% 4ms 1.04% _dl_runtime_resolve_xsavec 0 0% 80.99% 4ms 1.04% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 80.99% 4ms 1.04% boost::serialization::singleton::get_instance 0 0% 80.99% 4ms 1.04% mca_base_framework_components_open 0 0% 80.99% 4ms 1.04% mca_base_var_group_register 0 0% 80.99% 4ms 1.04% xcb_connect_to_display_with_auth_info 0 0% 80.99% 3ms 0.78% AbstractCardiacProblem::Initialise 2ms 0.52% 81.51% 3ms 0.78% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 81.51% 3ms 0.78% CxxTest::RealWorldDescription::tearDown 0 0% 81.51% 3ms 0.78% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 81.51% 3ms 0.78% PetscFinalize 0 0% 81.51% 3ms 0.78% PetscSetup::tearDownWorld 0 0% 81.51% 3ms 0.78% PetscSetupUtils::CommonFinalize 0 0% 81.51% 3ms 0.78% ProgressReporter::Update 1ms 0.26% 81.77% 3ms 0.78% VecCreate_Seq_Private (partial-inline) 3ms 0.78% 82.55% 3ms 0.78% __GI___libc_write 3ms 0.78% 83.33% 3ms 0.78% __GI_munmap 0 0% 83.33% 3ms 0.78% __ieee754_pow_fma 3ms 0.78% 84.11% 3ms 0.78% __libc_connect 3ms 0.78% 84.90% 3ms 0.78% __mmap64 0 0% 84.90% 3ms 0.78% __pow 0 0% 84.90% 3ms 0.78% _dl_lookup_symbol_x 0 0% 84.90% 3ms 0.78% _dl_map_object_from_fd 0 0% 84.90% 3ms 0.78% _dl_map_segments (inline) 0 0% 84.90% 3ms 0.78% _dl_unmap 0 0% 84.90% 3ms 0.78% _dl_unmap_segments (inline) 0 0% 84.90% 3ms 0.78% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 84.90% 3ms 0.78% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 84.90% 3ms 0.78% mca_base_component_repository_release 0 0% 84.90% 3ms 0.78% mca_base_component_var_register 0 0% 84.90% 3ms 0.78% mca_base_components_close 0 0% 84.90% 3ms 0.78% mca_base_var_register 0 0% 84.90% 3ms 0.78% mca_topo_base_dist_graph_neighbors_count 0 0% 84.90% 3ms 0.78% ompi_mpi_finalize 0 0% 84.90% 3ms 0.78% std::__basic_file::xsputn 0 0% 84.90% 3ms 0.78% std::basic_filebuf::_M_convert_to_external 0 0% 84.90% 3ms 0.78% std::basic_filebuf::overflow 0 0% 84.90% 3ms 0.78% std::basic_filebuf::sync 0 0% 84.90% 3ms 0.78% std::endl (inline) 0 0% 84.90% 3ms 0.78% std::flush (inline) 0 0% 84.90% 3ms 0.78% std::ostream::flush 0 0% 84.90% 3ms 0.78% std::ostream::operator<< (inline) 0 0% 84.90% 3ms 0.78% std::pow (inline) 0 0% 84.90% 2ms 0.52% AbstractFeVolumeIntegralAssembler::AssembleOnElement 0 0% 84.90% 2ms 0.52% AbstractFeVolumeIntegralAssembler::DoAssemble 1ms 0.26% 85.16% 2ms 0.52% KSPConvergedReasonViewFromOptions 2ms 0.52% 85.68% 2ms 0.52% PetscHeaderDestroy_Private 2ms 0.52% 86.20% 2ms 0.52% PetscMallocA 0 0% 86.20% 2ms 0.52% PetscOptionsFindPair 0 0% 86.20% 2ms 0.52% PetscOptionsGetViewer 0 0% 86.20% 2ms 0.52% VecCopy 0 0% 86.20% 2ms 0.52% VecCopy_Seq (partial-inline) 1ms 0.26% 86.46% 2ms 0.52% VecCreate 0 0% 86.46% 2ms 0.52% VecDestroy 0 0% 86.46% 2ms 0.52% [hwloc_pci.so] 1ms 0.26% 86.72% 2ms 0.52% [libpciaccess.so.0.11.1] 0 0% 86.72% 2ms 0.52% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 86.72% 2ms 0.52% _IO_new_file_underflow 0 0% 86.72% 2ms 0.52% __GI__IO_default_uflow 0 0% 86.72% 2ms 0.52% __GI__IO_getline_info 2ms 0.52% 87.24% 2ms 0.52% __GI___clock_nanosleep 0 0% 87.24% 2ms 0.52% __GI___nanosleep 0 0% 87.24% 2ms 0.52% __GI_exit 0 0% 87.24% 2ms 0.52% __cxa_finalize 2ms 0.52% 87.76% 2ms 0.52% __ieee754_exp_fma 0 0% 87.76% 2ms 0.52% __run_exit_handlers 2ms 0.52% 88.28% 2ms 0.52% __strcmp_evex 0 0% 88.28% 2ms 0.52% _dl_call_fini 0 0% 88.28% 2ms 0.52% _dl_fini 0 0% 88.28% 2ms 0.52% _dl_map_object_deps 1ms 0.26% 88.54% 2ms 0.52% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 88.54% 2ms 0.52% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 2ms 0.52% 89.06% 2ms 0.52% do_lookup_x 2ms 0.52% 89.58% 2ms 0.52% exp_inline (inline) 1ms 0.26% 89.84% 2ms 0.52% kh_get_HO (inline) 0 0% 89.84% 2ms 0.52% mca_base_framework_close 0 0% 89.84% 2ms 0.52% mca_base_select 0 0% 89.84% 2ms 0.52% mca_base_var_generate_full_name4 1ms 0.26% 90.10% 2ms 0.52% opal_init_util 0 0% 90.10% 2ms 0.52% openaux 0 0% 90.10% 2ms 0.52% pci_get_strings 2ms 0.52% 90.62% 2ms 0.52% std::_Rb_tree_increment 0 0% 90.62% 2ms 0.52% usleep