File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 94857ms, 91.81% of 103324ms total Dropped 1155 nodes (cum <= 516.62ms) flat flat% sum% cum cum% 0 0% 0% 103313ms 100% __libc_start_call_main 0 0% 0% 103313ms 100% __libc_start_main_impl 0 0% 0% 103313ms 100% _start 0 0% 0% 103311ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 103311ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 103311ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 103311ms 100% main 0 0% 0% 103274ms 100% CxxTest::RealTestDescription::run 0 0% 0% 103274ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 103274ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 103274ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 103274ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 103273ms 100% AbstractConvergenceTester::Converge 8ms 0.0077% 0.0077% 102322ms 99.03% AbstractCardiacProblem::Solve 4ms 0.0039% 0.012% 101468ms 98.20% AbstractDynamicLinearPdeSolver::Solve 5ms 0.0048% 0.016% 57854ms 55.99% LinearSystem::Solve 2ms 0.0019% 0.018% 57394ms 55.55% KSPSolve 12ms 0.012% 0.03% 57392ms 55.55% KSPSolve_Private 14ms 0.014% 0.044% 57090ms 55.25% KSPSolve_SYMMLQ 359ms 0.35% 0.39% 35931ms 34.78% AbstractCardiacTissue::SolveCellSystems 2ms 0.0019% 0.39% 31454ms 30.44% PCApply 6ms 0.0058% 0.4% 31440ms 30.43% PCApply_BJacobi_Singleblock 1ms 0.00097% 0.4% 29410ms 28.46% KSPSolve_PREONLY (partial-inline) 2ms 0.0019% 0.4% 28526ms 27.61% PCApply_ICC 6ms 0.0058% 0.41% 28524ms 27.61% MatSolve 28191ms 27.28% 27.69% 28518ms 27.60% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 752ms 0.73% 28.42% 27843ms 26.95% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 3ms 0.0029% 28.42% 26925ms 26.06% KSP_PCApply.lto_priv.18 6024ms 5.83% 34.25% 24545ms 23.76% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 14ms 0.014% 34.27% 21281ms 20.60% MatMult 213ms 0.21% 34.47% 21267ms 20.58% MatMult_SeqAIJ (partial-inline) 20829ms 20.16% 54.63% 21264ms 20.58% MatMult_SeqAIJ_Inode (inline) 1785ms 1.73% 56.36% 12966ms 12.55% CardiacNewtonSolver::Solve 4127ms 3.99% 60.35% 7690ms 7.44% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 165ms 0.16% 60.51% 7055ms 6.83% AbstractCardiacTissue::UpdateCaches (inline) 983ms 0.95% 61.46% 6781ms 6.56% BidomainSolver::SetupLinearSystem 1334ms 1.29% 62.76% 6587ms 6.38% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1066ms 1.03% 63.79% 6574ms 6.36% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1ms 0.00097% 63.79% 6051ms 5.86% KSP_PCApply (partial-inline) 5ms 0.0048% 63.79% 5643ms 5.46% KSPConvergedDefault 5297ms 5.13% 68.92% 5297ms 5.13% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3323ms 3.22% 72.14% 3392ms 3.28% __ieee754_log_fma 0 0% 72.14% 3138ms 3.04% boost::numeric::ublas::norm_inf (inline) 2149ms 2.08% 74.22% 3138ms 3.04% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.22% 3138ms 3.04% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.22% 3138ms 3.04% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 6ms 0.0058% 74.22% 2727ms 2.64% MatNullSpaceRemove 31ms 0.03% 74.25% 2550ms 2.47% std::pow (inline) 306ms 0.3% 74.55% 2511ms 2.43% __pow 2477ms 2.40% 76.94% 2477ms 2.40% __memcpy_avx512_unaligned_erms 0 0% 76.94% 2447ms 2.37% PetscMemcpy (inline) 1515ms 1.47% 78.41% 2377ms 2.30% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2347ms 2.27% 80.68% 2347ms 2.27% ddot_ 293ms 0.28% 80.97% 2169ms 2.10% __ieee754_pow_fma 13ms 0.013% 80.98% 2140ms 2.07% VecCopy 2ms 0.0019% 80.98% 2126ms 2.06% VecCopy_Seq (partial-inline) 12ms 0.012% 80.99% 2039ms 1.97% VecAXPY 5ms 0.0048% 81.00% 2027ms 1.96% VecAXPY_Seq 2014ms 1.95% 82.95% 2014ms 1.95% daxpy_ 5ms 0.0048% 82.95% 1848ms 1.79% VecDot 0 0% 82.95% 1843ms 1.78% VecDot_Seq 5ms 0.0048% 82.96% 1843ms 1.78% VecXDot_Seq_Private.constprop.0 1ms 0.00097% 82.96% 1780ms 1.72% VecMDot 7ms 0.0068% 82.96% 1779ms 1.72% VecMXDot_Private 1760ms 1.70% 84.67% 1770ms 1.71% VecMDot_Seq 0 0% 84.67% 1563ms 1.51% AbstractFeVolumeIntegralAssembler::DoAssemble 1239ms 1.20% 85.87% 1294ms 1.25% exp_inline (inline) 10ms 0.0097% 85.88% 1251ms 1.21% AbstractFeVolumeIntegralAssembler::AssembleOnElement 0 0% 85.88% 1078ms 1.04% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 85.88% 983ms 0.95% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.88% 983ms 0.95% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.88% 983ms 0.95% boost_numeric_ublas_abs (inline) 983ms 0.95% 86.83% 983ms 0.95% std::abs (inline) 7ms 0.0068% 86.83% 941ms 0.91% VecMAXPY 929ms 0.9% 87.73% 934ms 0.9% VecMAXPY_Seq 4ms 0.0039% 87.74% 849ms 0.82% boost::numeric::ublas::matrix_assign (inline) 179ms 0.17% 87.91% 838ms 0.81% boost::numeric::ublas::indexing_matrix_assign 817ms 0.79% 88.70% 817ms 0.79% [libchaste_heart.so] 0 0% 88.70% 796ms 0.77% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.70% 796ms 0.77% CuboidMeshConstructor::Construct 1ms 0.00097% 88.70% 796ms 0.77% DistributedTetrahedralMesh::ConstructCuboid 1ms 0.00097% 88.70% 778ms 0.75% BidomainProblem::WriteOneStep 496ms 0.48% 89.18% 775ms 0.75% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1ms 0.00097% 89.18% 756ms 0.73% VecNorm 1ms 0.00097% 89.18% 747ms 0.72% VecNorm_Seq 4ms 0.0039% 89.19% 718ms 0.69% VecScale 4ms 0.0039% 89.19% 714ms 0.69% VecScale_Seq 4ms 0.0039% 89.20% 713ms 0.69% Element::Element 708ms 0.69% 89.88% 708ms 0.69% dscal_ 3ms 0.0029% 89.88% 703ms 0.68% AbstractTetrahedralElement::CalculateJacobian 696ms 0.67% 90.56% 696ms 0.67% __memset_avx512_unaligned_erms 0 0% 90.56% 689ms 0.67% PetscMemzero (inline) 4ms 0.0039% 90.56% 671ms 0.65% BidomainAssembler::ComputeMatrixTerm 10ms 0.0097% 90.57% 658ms 0.64% boost::numeric::ublas::c_matrix::c_matrix (inline) 1ms 0.00097% 90.57% 655ms 0.63% AbstractTetrahedralElement::AbstractTetrahedralElement 2ms 0.0019% 90.57% 608ms 0.59% AbstractBidomainSolver::FinaliseLinearSystem 182ms 0.18% 90.75% 604ms 0.58% AbstractBidomainSolver::CheckCompatibilityCondition 3ms 0.0029% 90.75% 592ms 0.57% VecDuplicate 1ms 0.00097% 90.75% 561ms 0.54% H5Dwrite 559ms 0.54% 91.30% 559ms 0.54% log_inline (inline) 2ms 0.0019% 91.30% 541ms 0.52% H5D__write 525ms 0.51% 91.81% 525ms 0.51% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline)