File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12567ms, 85.84% of 14640ms total Dropped 737 nodes (cum <= 73.20ms) flat flat% sum% cum cum% 0 0% 0% 14633ms 100% __libc_start_call_main 0 0% 0% 14633ms 100% __libc_start_main_impl 0 0% 0% 14633ms 100% _start 0 0% 0% 14630ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14630ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14630ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14630ms 99.93% main 0 0% 0% 14595ms 99.69% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14594ms 99.69% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14594ms 99.69% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.014% 0.014% 14574ms 99.55% AbstractCardiacProblem::Solve 4ms 0.027% 0.041% 11255ms 76.88% AbstractDynamicLinearPdeSolver::Solve 28ms 0.19% 0.23% 8903ms 60.81% AbstractCardiacTissue::SolveCellSystems 97ms 0.66% 0.89% 5605ms 38.29% AbstractCardiacCell::ComputeExceptVoltage 152ms 1.04% 1.93% 4894ms 33.43% AbstractOneStepIvpOdeSolver::InternalSolve 214ms 1.46% 3.39% 4210ms 28.76% EulerIvpOdeSolver::CalculateNextYValue 937ms 6.40% 9.80% 3944ms 26.94% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1701ms 11.62% 21.41% 3524ms 24.07% __GI___exp 1ms 0.0068% 21.42% 3251ms 22.21% MonodomainProblem::WriteOneStep 3ms 0.02% 21.44% 3103ms 21.20% Hdf5DataWriter::PutVector 0 0% 21.44% 3087ms 21.09% H5Dwrite 3ms 0.02% 21.46% 3051ms 20.84% H5D__write 76ms 0.52% 21.98% 2546ms 17.39% AbstractCardiacTissue::UpdateCaches (inline) 806ms 5.51% 27.49% 2441ms 16.67% CellLuoRudy1991FromCellML::GetIIonic 1608ms 10.98% 38.47% 1760ms 12.02% __ieee754_exp_fma 0 0% 38.47% 1757ms 12.00% H5D__chunk_collective_write 12ms 0.082% 38.55% 1757ms 12.00% H5F_set_coll_metadata_reads 19ms 0.13% 38.68% 1548ms 10.57% H5FD_s3comms_uriencode 0 0% 38.68% 1515ms 10.35% LinearSystem::Solve 0 0% 38.68% 1406ms 9.60% KSPSolve 4ms 0.027% 38.71% 1406ms 9.60% KSPSolve_Private 4ms 0.027% 38.74% 1400ms 9.56% KSPSolve_CG 47ms 0.32% 39.06% 1220ms 8.33% 4ms 0.027% 39.08% 1220ms 8.33% H5F_block_write 2ms 0.014% 39.10% 1216ms 8.31% H5PB_write 1ms 0.0068% 39.11% 1214ms 8.29% H5F__accum_write 0 0% 39.11% 1213ms 8.29% H5FD_write 5ms 0.034% 39.14% 1182ms 8.07% H5D__chunk_cacheable 4ms 0.027% 39.17% 1123ms 7.67% H5D__mpio_select_write 446ms 3.05% 42.21% 1036ms 7.08% H5S_select_iterate 0 0% 42.21% 1033ms 7.06% PMPI_File_write_at_all 1007ms 6.88% 49.09% 1010ms 6.90% __GI_pwritev64 5ms 0.034% 49.13% 873ms 5.96% std::pow (inline) 98ms 0.67% 49.80% 868ms 5.93% __pow 411ms 2.81% 52.60% 814ms 5.56% MonodomainSolver::SetupLinearSystem 79ms 0.54% 53.14% 768ms 5.25% __ieee754_pow_fma 0 0% 53.14% 762ms 5.20% PCApply 1ms 0.0068% 53.15% 758ms 5.18% PCApply_BJacobi_Singleblock 0 0% 53.15% 729ms 4.98% KSPSolve_PREONLY 2ms 0.014% 53.16% 725ms 4.95% PCApply_ICC 1ms 0.0068% 53.17% 723ms 4.94% MatSolve 714ms 4.88% 58.05% 722ms 4.93% MatSolve_SeqSBAIJ_1_NaturalOrdering 77ms 0.53% 58.57% 602ms 4.11% H5D__chunk_set_sizes 248ms 1.69% 60.27% 567ms 3.87% CellLuoRudy1991FromCellML::VerifyStateVariables 5ms 0.034% 60.30% 561ms 3.83% MatMult 555ms 3.79% 64.09% 556ms 3.80% MatMult_SeqAIJ 0 0% 64.09% 486ms 3.32% KSP_PCApply.lto_priv.7 35ms 0.24% 64.33% 398ms 2.72% H5S_mpio_space_type 372ms 2.54% 66.87% 372ms 2.54% log_inline (inline) 2ms 0.014% 66.89% 357ms 2.44% KSPConvergedDefault 294ms 2.01% 68.89% 295ms 2.02% exp_inline (inline) 0 0% 68.89% 279ms 1.91% KSP_PCApply 111ms 0.76% 69.65% 224ms 1.53% TimeStepper::TimeStepper 7ms 0.048% 69.70% 194ms 1.33% ompi_datatype_destroy 6ms 0.041% 69.74% 192ms 1.31% MPI_Type_free 188ms 1.28% 71.02% 188ms 1.28% [libchaste_heart.so] 19ms 0.13% 71.15% 183ms 1.25% H5VM_chunk_index 34ms 0.23% 71.39% 182ms 1.24% __GI___libc_free 83ms 0.57% 71.95% 175ms 1.20% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 173ms 1.18% 73.14% 173ms 1.18% ddot_ 44ms 0.3% 73.44% 172ms 1.17% ompi_datatype_release_args 11ms 0.075% 73.51% 172ms 1.17% ompi_info_register_framework_params 103ms 0.7% 74.21% 169ms 1.15% top12 (inline) 33ms 0.23% 74.44% 167ms 1.14% __GI___libc_malloc 130ms 0.89% 75.33% 165ms 1.13% _int_malloc 31ms 0.21% 75.54% 164ms 1.12% AbstractCardiacCell::SetVoltage (partial-inline) 53ms 0.36% 75.90% 148ms 1.01% _int_free 1ms 0.0068% 75.91% 147ms 1.00% Hdf5DataWriter::PutUnlimitedVariable 8ms 0.055% 75.96% 146ms 1% ompi_datatype_create 127ms 0.87% 76.83% 145ms 0.99% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 114ms 0.78% 77.61% 145ms 0.99% AbstractOneStepIvpOdeSolver::Solve 16ms 0.11% 77.72% 128ms 0.87% H5S_set_version 127ms 0.87% 78.59% 127ms 0.87% std::isinf (inline) 122ms 0.83% 79.42% 122ms 0.83% TimeStepper::CalculateNextTime 102ms 0.7% 80.12% 115ms 0.79% AbstractParameterisedSystem::SetAnyVariable 115ms 0.79% 80.90% 115ms 0.79% __ieee754_log_fma 38ms 0.26% 81.16% 114ms 0.78% std::__cxx11::basic_string::basic_string 44ms 0.3% 81.46% 112ms 0.77% H5VM_array_calc 4ms 0.027% 81.49% 106ms 0.72% PMPI_File_set_view 1ms 0.0068% 81.50% 106ms 0.72% VecDuplicate 0 0% 81.50% 106ms 0.72% VecTDot 4ms 0.027% 81.52% 105ms 0.72% VecDuplicate_MPI 0 0% 81.52% 105ms 0.72% VecTDot_Seq 1ms 0.0068% 81.53% 105ms 0.72% VecXDot_Seq_Private.constprop.0 105ms 0.72% 82.25% 105ms 0.72% __memcpy_avx_unaligned_erms 56ms 0.38% 82.63% 102ms 0.7% AbstractCardiacCell::GetVoltage (partial-inline) 61ms 0.42% 83.05% 100ms 0.68% H5S_hyper_add_span_element 3ms 0.02% 83.07% 96ms 0.66% VecNorm 74ms 0.51% 83.57% 89ms 0.61% AbstractParameterisedSystem::GetAnyVariable 4ms 0.027% 83.60% 88ms 0.6% PMPI_Type_create_resized 87ms 0.59% 84.19% 87ms 0.59% H5VM_array_offset_pre 1ms 0.0068% 84.20% 86ms 0.59% VecNorm_Seq 53ms 0.36% 84.56% 84ms 0.57% TimeStepper::AdvanceOneTimeStep 79ms 0.54% 85.10% 79ms 0.54% H5VM_chunk_index_scaled 27ms 0.18% 85.29% 79ms 0.54% __libc_calloc 2ms 0.014% 85.30% 77ms 0.53% H5D__chunk_allocated 76ms 0.52% 85.82% 76ms 0.52% std::vector::operator[] (inline) 1ms 0.0068% 85.83% 74ms 0.51% H5D__select_write 2ms 0.014% 85.84% 74ms 0.51% opal_datatype_create_desc