File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 385ms, 86.52% of 445ms total Dropped 179 nodes (cum <= 2.23ms) flat flat% sum% cum cum% 0 0% 0% 438ms 98.43% __libc_start_call_main 0 0% 0% 438ms 98.43% __libc_start_main_impl 0 0% 0% 438ms 98.43% _start 0 0% 0% 435ms 97.75% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 435ms 97.75% CxxTest::TestRunner::runAllTests 0 0% 0% 435ms 97.75% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 435ms 97.75% main 0 0% 0% 398ms 89.44% CxxTest::RealTestDescription::run 0 0% 0% 398ms 89.44% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 398ms 89.44% CxxTest::TestRunner::runTest (inline) 1ms 0.22% 0.22% 398ms 89.44% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0.22% 398ms 89.44% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0.22% 393ms 88.31% AbstractCardiacProblem::Solve 0 0% 0.22% 391ms 87.87% AbstractDynamicLinearPdeSolver::Solve 0 0% 0.22% 357ms 80.22% LinearSystem::Solve 0 0% 0.22% 356ms 80.00% KSPSolve 1ms 0.22% 0.45% 356ms 80.00% KSPSolve_Private 0 0% 0.45% 355ms 79.78% KSPSolve_CG 0 0% 0.45% 210ms 47.19% KSP_PCApply.lto_priv.7 0 0% 0.45% 206ms 46.29% PCApply 0 0% 0.45% 206ms 46.29% PCApply_BJacobi_Singleblock 0 0% 0.45% 182ms 40.90% KSPSolve_PREONLY (partial-inline) 0 0% 0.45% 173ms 38.88% MatSolve 170ms 38.20% 38.65% 173ms 38.88% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 38.65% 173ms 38.88% PCApply_ICC 0 0% 38.65% 68ms 15.28% MatMult 2ms 0.45% 39.10% 68ms 15.28% MatMult_SeqAIJ (partial-inline) 66ms 14.83% 53.93% 68ms 15.28% MatMult_SeqAIJ_Inode (inline) 49ms 11.01% 64.94% 49ms 11.01% ddot_ 0 0% 64.94% 33ms 7.42% CxxTest::RealWorldDescription::setUp 0 0% 64.94% 33ms 7.42% PetscInitialize 0 0% 64.94% 33ms 7.42% PetscSetup::setUpWorld 0 0% 64.94% 33ms 7.42% PetscSetupUtils::CommonSetup 0 0% 64.94% 33ms 7.42% PetscSetupUtils::InitialisePetsc 0 0% 64.94% 32ms 7.19% PMPI_Init_thread 0 0% 64.94% 32ms 7.19% ompi_mpi_init 0 0% 64.94% 31ms 6.97% VecTDot 0 0% 64.94% 31ms 6.97% VecTDot_Seq 0 0% 64.94% 31ms 6.97% VecXDot_Seq_Private.constprop.0 0 0% 64.94% 30ms 6.74% AbstractCardiacTissue::SolveCellSystems 1ms 0.22% 65.17% 26ms 5.84% 0 0% 65.17% 22ms 4.94% orte_init 1ms 0.22% 65.39% 20ms 4.49% VecNorm 0 0% 65.39% 18ms 4.04% MatNullSpaceRemove 0 0% 65.39% 18ms 4.04% VecNorm_Seq 0 0% 65.39% 16ms 3.60% AbstractCardiacCell::ComputeExceptVoltage 0 0% 65.39% 16ms 3.60% VecAYPX 16ms 3.60% 68.99% 16ms 3.60% VecAYPX_Seq 0 0% 68.99% 15ms 3.37% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 68.99% 15ms 3.37% __GI__dl_catch_exception 0 0% 68.99% 15ms 3.37% _dl_catch_error 0 0% 68.99% 15ms 3.37% _dlerror_run 6ms 1.35% 70.34% 14ms 3.15% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 70.34% 14ms 3.15% EulerIvpOdeSolver::CalculateNextYValue 0 0% 70.34% 14ms 3.15% VecMDot 14ms 3.15% 73.48% 14ms 3.15% VecMDot_Seq 0 0% 73.48% 14ms 3.15% VecMXDot_Private 0 0% 73.48% 14ms 3.15% opal_stackframe_output 0 0% 73.48% 13ms 2.92% KSP_PCApply (partial-inline) 0 0% 73.48% 13ms 2.92% hwloc_topology_load 0 0% 73.48% 12ms 2.70% hwloc_linux_get_tid_last_cpu_location 0 0% 73.48% 11ms 2.47% VecDuplicate 0 0% 73.48% 11ms 2.47% VecDuplicate_Seq 0 0% 73.48% 11ms 2.47% mca_base_framework_open 0 0% 73.48% 10ms 2.25% mca_base_framework_components_register 0 0% 73.48% 10ms 2.25% mca_base_framework_register 4ms 0.9% 74.38% 9ms 2.02% __GI___exp 0 0% 74.38% 8ms 1.80% ___dlopen 0 0% 74.38% 8ms 1.80% _dl_init 0 0% 74.38% 8ms 1.80% _dl_open 0 0% 74.38% 8ms 1.80% call_init (inline) 0 0% 74.38% 8ms 1.80% dl_open_worker 0 0% 74.38% 8ms 1.80% dlopen_doit 0 0% 74.38% 8ms 1.80% dlopen_implementation (inline) 0 0% 74.38% 8ms 1.80% mca_base_component_find 0 0% 74.38% 8ms 1.80% mca_base_component_repository_open 0 0% 74.38% 7ms 1.57% AbstractCardiacTissue::UpdateCaches (inline) 2ms 0.45% 74.83% 7ms 1.57% CellLuoRudy1991FromCellML::GetIIonic 6ms 1.35% 76.18% 7ms 1.57% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 76.18% 7ms 1.57% VecCreate 0 0% 76.18% 7ms 1.57% __dlclose 0 0% 76.18% 7ms 1.57% _dl_close 3ms 0.67% 76.85% 7ms 1.57% _dl_close_worker (inline) 0 0% 76.85% 7ms 1.57% _dl_start_user 0 0% 76.85% 7ms 1.57% dl_open_worker_begin 0 0% 76.85% 7ms 1.57% mca_base_component_repository_release 0 0% 76.85% 6ms 1.35% KSPConvergedDefault 4ms 0.9% 77.75% 6ms 1.35% __cxa_finalize 0 0% 77.75% 6ms 1.35% _dl_call_fini 0 0% 77.75% 6ms 1.35% _dl_map_object 0 0% 77.75% 6ms 1.35% mca_base_components_close 0 0% 77.75% 5ms 1.12% VecAXPY 0 0% 77.75% 5ms 1.12% VecAXPY_Seq 1ms 0.22% 77.98% 5ms 1.12% __GI___libc_malloc 4ms 0.9% 78.88% 5ms 1.12% __ieee754_exp_fma 0 0% 78.88% 4ms 0.9% AbstractCardiacProblem::Initialise 0 0% 78.88% 4ms 0.9% CxxTest::RealWorldDescription::tearDown 0 0% 78.88% 4ms 0.9% MPI_Comm_set_attr 0 0% 78.88% 4ms 0.9% PetscFinalize 0 0% 78.88% 4ms 0.9% PetscHeaderCreate_Private 0 0% 78.88% 4ms 0.9% PetscMallocA 0 0% 78.88% 4ms 0.9% PetscMallocAlign 0 0% 78.88% 4ms 0.9% PetscMemcpy (inline) 0 0% 78.88% 4ms 0.9% PetscSetup::tearDownWorld 0 0% 78.88% 4ms 0.9% PetscSetupUtils::CommonFinalize 0 0% 78.88% 4ms 0.9% VecCreate_Seq 0 0% 78.88% 4ms 0.9% VecMAXPY 4ms 0.9% 79.78% 4ms 0.9% VecMAXPY_Seq 0 0% 79.78% 4ms 0.9% VecSetType 4ms 0.9% 80.67% 4ms 0.9% __memcpy_avx_unaligned_erms 1ms 0.22% 80.90% 4ms 0.9% __posix_memalign 0 0% 80.90% 4ms 0.9% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 80.90% 4ms 0.9% boost::serialization::singleton::get_instance 2ms 0.45% 81.35% 4ms 0.9% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 81.35% 4ms 0.9% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 81.35% 4ms 0.9% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 4ms 0.9% 82.25% 4ms 0.9% daxpy_ 2ms 0.45% 82.70% 4ms 0.9% ompi_attr_set_c 0 0% 82.70% 4ms 0.9% ompi_mpi_finalize 0 0% 82.70% 4ms 0.9% opal_hwloc_base_get_topology 0 0% 82.70% 4ms 0.9% orte_ess_base_proc_binding 0 0% 82.70% 3ms 0.67% BidomainSolver::SetupLinearSystem 0 0% 82.70% 3ms 0.67% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 82.70% 3ms 0.67% KSPConvergedReasonViewFromOptions 2ms 0.45% 83.15% 3ms 0.67% PetscOptionsFindPair 0 0% 83.15% 3ms 0.67% PetscOptionsGetViewer 0 0% 83.15% 3ms 0.67% VecDestroy 0 0% 83.15% 3ms 0.67% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 3ms 0.67% 83.82% 3ms 0.67% __GI___libc_read 0 0% 83.82% 3ms 0.67% __GI_exit 1ms 0.22% 84.04% 3ms 0.67% __ieee754_pow_fma 3ms 0.67% 84.72% 3ms 0.67% __libc_openat64 0 0% 84.72% 3ms 0.67% __pow 0 0% 84.72% 3ms 0.67% __run_exit_handlers 0 0% 84.72% 3ms 0.67% _dl_fini 2ms 0.45% 85.17% 3ms 0.67% _dl_fixup 0 0% 85.17% 3ms 0.67% _dl_map_object_deps 0 0% 85.17% 3ms 0.67% _dl_map_object_from_fd 0 0% 85.17% 3ms 0.67% _dl_runtime_resolve_xsavec 3ms 0.67% 85.84% 3ms 0.67% _int_malloc 0 0% 85.84% 3ms 0.67% mca_base_framework_close 0 0% 85.84% 3ms 0.67% mca_base_var_group_register 0 0% 85.84% 3ms 0.67% mca_base_var_register 0 0% 85.84% 3ms 0.67% openaux 0 0% 85.84% 3ms 0.67% std::pow (inline) 3ms 0.67% 86.52% 3ms 0.67% strcmp