File: Test2dVertexBasedSimulationWithFreeBoundary Type: cpu Showing nodes accounting for 60291ms, 82.15% of 73395ms total Dropped 1201 nodes (cum <= 366.98ms) flat flat% sum% cum cum% 0 0% 0% 70011ms 95.39% __libc_start_call_main 0 0% 0% 70011ms 95.39% __libc_start_main_impl 0 0% 0% 70011ms 95.39% _start 0 0% 0% 69996ms 95.37% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 69996ms 95.37% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 69996ms 95.37% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 69996ms 95.37% main 0 0% 0% 69959ms 95.32% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 69959ms 95.32% CxxTest::TestRunner::runTest (inline) 0 0% 0% 69959ms 95.32% Test2DVertexSimulationWithFreeBoundary::Test2DFreeBoundaryVertexSimulationForProfiling 0 0% 0% 68254ms 93.00% AbstractCellBasedSimulation::Solve 1ms 0.0014% 0.0014% 32147ms 43.80% AbstractCellPopulation::WriteResultsToFiles 0 0% 0.0014% 24463ms 33.33% VertexBasedCellPopulation::WriteVtkResultsToFile 16ms 0.022% 0.023% 24114ms 32.86% VertexBasedCellPopulation::WriteCellVtkResultsToFile 0 0% 0.023% 21258ms 28.96% VertexMeshWriter::WriteVtkUsingMesh 8ms 0.011% 0.034% 20876ms 28.44% OffLatticeSimulation::UpdateCellLocationsAndTopology 5ms 0.0068% 0.041% 20132ms 27.43% ForwardEulerNumericalMethod::UpdateAllNodePositions 22ms 0.03% 0.071% 19763ms 26.93% AbstractNumericalMethod::ComputeForcesIncludingDamping 25ms 0.034% 0.1% 16366ms 22.30% VertexMeshWriter::MakeVtkMesh 127ms 0.17% 0.28% 15007ms 20.45% FarhadifarForce::AddForceContribution 0 0% 0.28% 14207ms 19.36% AbstractCellBasedSimulation::UpdateCellPopulation 0 0% 0.28% 13201ms 17.99% VertexBasedCellPopulation::Update 2ms 0.0027% 0.28% 13138ms 17.90% MutableVertexMesh::ReMesh 2ms 0.0027% 0.28% 11641ms 15.86% vtkPolygon::New 13ms 0.018% 0.3% 11629ms 15.84% vtkPolygon::vtkPolygon 56ms 0.076% 0.38% 8249ms 11.24% vtkCell::vtkCell 196ms 0.27% 0.64% 7638ms 10.41% MutableVertexMesh::CheckForIntersections 38ms 0.052% 0.7% 7136ms 9.72% vtkPoints::New 570ms 0.78% 1.47% 7055ms 9.61% operator new 112ms 0.15% 1.63% 6781ms 9.24% vtkPoints::vtkPoints 248ms 0.34% 1.96% 6699ms 9.13% boost::numeric::ublas::c_vector::c_vector (partial-inline) 2267ms 3.09% 5.05% 6514ms 8.88% __GI___libc_malloc 171ms 0.23% 5.29% 6022ms 8.20% FarhadifarForce::GetLineTensionParameter 193ms 0.26% 5.55% 5927ms 8.08% boost::numeric::ublas::vector_assign (inline) 109ms 0.15% 5.70% 5895ms 8.03% CellPropertyCollection::GetPropertiesType (inline) 2286ms 3.11% 8.81% 5810ms 7.92% __GI___libc_free 17ms 0.023% 8.83% 5753ms 7.84% vtkQuad::New 497ms 0.68% 9.51% 5726ms 7.80% VertexMesh::GetVectorFromAtoB 45ms 0.061% 9.57% 5720ms 7.79% vtkQuad::vtkQuad 12ms 0.016% 9.59% 5203ms 7.09% vtkLine::New 10ms 0.014% 9.60% 5120ms 6.98% vtkTriangle::New 94ms 0.13% 9.73% 5083ms 6.93% vtkLine::vtkLine 65ms 0.089% 9.82% 5052ms 6.88% vtkTriangle::vtkTriangle 2ms 0.0027% 9.82% 4741ms 6.46% vtkXMLWriterBase::Write 2ms 0.0027% 9.82% 4739ms 6.46% vtkStreamingDemandDrivenPipeline::Update 26ms 0.035% 9.86% 4711ms 6.42% AbstractCellProperty::IsSubType (inline) 1ms 0.0014% 9.86% 4710ms 6.42% vtkDemandDrivenPipeline::ProcessRequest 0 0% 9.86% 4700ms 6.40% vtkStreamingDemandDrivenPipeline::ProcessRequest 0 0% 9.86% 4694ms 6.40% vtkExecutive::CallAlgorithm 1202ms 1.64% 11.50% 4684ms 6.38% __dynamic_cast 1ms 0.0014% 11.50% 4682ms 6.38% vtkDemandDrivenPipeline::ExecuteData 3ms 0.0041% 11.50% 4678ms 6.37% vtkXMLUnstructuredDataWriter::ProcessRequest 0 0% 11.50% 4675ms 6.37% vtkCompositeDataPipeline::ExecuteData 1443ms 1.97% 13.47% 4668ms 6.36% boost::numeric::ublas::indexing_vector_assign 38ms 0.052% 13.52% 4537ms 6.18% VertexBasedCellPopulation::GetDampingConstant 275ms 0.37% 13.90% 4505ms 6.14% vtkPoints::SetDataType 531ms 0.72% 14.62% 4279ms 5.83% std::__new_allocator::allocate (inline) 678ms 0.92% 15.54% 4203ms 5.73% std::_Rb_tree::_M_erase 0 0% 15.54% 4131ms 5.63% std::allocator_traits::allocate (inline) 13ms 0.018% 15.56% 4108ms 5.60% vtkPolygon::~vtkPolygon 617ms 0.84% 16.40% 4039ms 5.50% VertexMesh::ElementIncludesPoint 0 0% 16.40% 3854ms 5.25% vtkXMLUnstructuredDataWriter::WriteAPiece 0 0% 16.40% 3854ms 5.25% vtkXMLUnstructuredGridWriter::WriteAppendedPieceData 3ms 0.0041% 16.41% 3835ms 5.23% MutableVertexMesh::RemoveDeletedNodesAndElements 0 0% 16.41% 3778ms 5.15% std::_Rb_tree::_M_create_node (inline) 107ms 0.15% 16.55% 3763ms 5.13% std::__new_allocator::deallocate (inline) 0 0% 16.55% 3756ms 5.12% std::allocator_traits::deallocate (inline) 0 0% 16.55% 3694ms 5.03% std::_Rb_tree::_M_drop_node (inline) 121ms 0.16% 16.72% 3679ms 5.01% std::_Rb_tree::~_Rb_tree (inline) 348ms 0.47% 17.19% 3595ms 4.90% std::ostream::_M_insert 6ms 0.0082% 17.20% 3573ms 4.87% std::ostream::operator<< (inline) 0 0% 17.20% 3536ms 4.82% std::set::~set (inline) 0 0% 17.20% 3531ms 4.81% std::_Rb_tree::_M_put_node (inline) 3060ms 4.17% 21.37% 3513ms 4.79% _int_free 3ms 0.0041% 21.37% 3458ms 4.71% tbb::detail::r1::parallel_pipeline 0 0% 21.37% 3441ms 4.69% std::_Rb_tree::_M_get_node (inline) 33ms 0.045% 21.42% 3369ms 4.59% Cell::GetMutationState 0 0% 21.42% 3344ms 4.56% clone3 0 0% 21.42% 3344ms 4.56% start_thread 0 0% 21.42% 3321ms 4.52% std::_Rb_tree::_Alloc_node::operator() (inline) 4ms 0.0054% 21.42% 3315ms 4.52% tbb::detail::r1::reset 1405ms 1.91% 23.34% 3289ms 4.48% tbb::detail::r1::wait_bounded_queue_monitor 74ms 0.1% 23.44% 3249ms 4.43% vtkCell::~vtkCell 1973ms 2.69% 26.13% 3148ms 4.29% _int_malloc 5ms 0.0068% 26.13% 3079ms 4.20% vtkXMLWriter::WriteBinaryData 5ms 0.0068% 26.14% 3042ms 4.14% vtkXMLWriter::WriteBinaryDataInternal 5ms 0.0068% 26.15% 3032ms 4.13% vtkXMLWriter::WriteBinaryDataBlock 421ms 0.57% 26.72% 2961ms 4.03% AbstractMesh::GetVectorFromAtoB 70ms 0.095% 26.82% 2956ms 4.03% vtkBase64OutputStream::Write 259ms 0.35% 27.17% 2954ms 4.02% std::map::operator[] (partial-inline) 57ms 0.078% 27.25% 2909ms 3.96% std::_Rb_tree::_Rb_tree (partial-inline) 238ms 0.32% 27.57% 2885ms 3.93% vtkBase64OutputStream::EncodeTriplet 8ms 0.011% 27.58% 2879ms 3.92% NodeLocationWriter::VisitAnyPopulation 2832ms 3.86% 31.44% 2832ms 3.86% __strcmp_avx2 135ms 0.18% 31.62% 2796ms 3.81% VertexMesh::GetNextEdgeGradientOfElementAtNode 290ms 0.4% 32.02% 2735ms 3.73% std::_Rb_tree::_M_copy (inline) 465ms 0.63% 32.65% 2717ms 3.70% vtkAOSDataArrayTemplate::vtkAOSDataArrayTemplate 4ms 0.0054% 32.66% 2700ms 3.68% std::set::set (inline) 0 0% 32.66% 2553ms 3.48% vtkXMLUnstructuredDataWriter::WriteAppendedPieceData 159ms 0.22% 32.88% 2491ms 3.39% std::num_put::_M_insert_float 1148ms 1.56% 34.44% 2483ms 3.38% __cxxabiv1::__si_class_type_info::__do_dyncast 0 0% 34.44% 2463ms 3.36% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 34.44% 2463ms 3.36% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 129ms 0.18% 34.62% 2461ms 3.35% MutableElement::ResetIndex 156ms 0.21% 34.83% 2456ms 3.35% boost::numeric::ublas::c_vector::operator= (inline) 9ms 0.012% 34.84% 2408ms 3.28% MutableVertexMesh::RemoveDeletedNodes 776ms 1.06% 35.90% 2406ms 3.28% std::ostream::write 2349ms 3.20% 39.10% 2349ms 3.20% __memcpy_avx_unaligned_erms 12ms 0.016% 39.11% 2339ms 3.19% EdgeHelper::RemoveDeletedEdges 315ms 0.43% 39.54% 2306ms 3.14% std::_Rb_tree::_M_clone_node (inline) 12ms 0.016% 39.56% 2254ms 3.07% AbstractCellPopulation::AcceptCellWritersAcrossPopulation 1072ms 1.46% 41.02% 2200ms 3.00% std::_Rb_tree::_M_lower_bound (inline) 21ms 0.029% 41.05% 2193ms 2.99% EdgeHelper::UpdateEdgesMapKey 85ms 0.12% 41.16% 2165ms 2.95% vtkPoints::~vtkPoints 685ms 0.93% 42.10% 2150ms 2.93% AbstractMesh::GetDistanceBetweenNodes (partial-inline) 71ms 0.097% 42.19% 2147ms 2.93% std::__copy_move::__copy_m (inline) 0 0% 42.19% 2147ms 2.93% std::__copy_move_a (inline) 0 0% 42.19% 2147ms 2.93% std::__copy_move_a1 (inline) 0 0% 42.19% 2147ms 2.93% std::__copy_move_a2 (inline) 0 0% 42.19% 2147ms 2.93% std::copy (inline) 62ms 0.084% 42.28% 2089ms 2.85% AbstractCellPopulation::GetCellUsingLocationIndex 44ms 0.06% 42.34% 2024ms 2.76% std::__cxx11::collate::do_transform 0 0% 42.34% 1986ms 2.71% std::set::insert (inline) 1966ms 2.68% 45.02% 1966ms 2.68% boost::numeric::ublas::c_vector::operator() 0 0% 45.02% 1964ms 2.68% boost::numeric::ublas::norm_2 (inline) 29ms 0.04% 45.06% 1937ms 2.64% ___vsnprintf 1568ms 2.14% 47.19% 1927ms 2.63% boost::numeric::ublas::vector_norm_2::apply (partial-inline) 1ms 0.0014% 47.20% 1908ms 2.60% __vsnprintf_internal (inline) 1896ms 2.58% 49.78% 1896ms 2.58% boost::numeric::ublas::same_impl_ex 12ms 0.016% 49.79% 1881ms 2.56% VertexBasedCellPopulation::AcceptCellWriter 174ms 0.24% 50.03% 1881ms 2.56% __printf_buffer 1872ms 2.55% 52.58% 1872ms 2.55% __GI_sched_yield 24ms 0.033% 52.62% 1862ms 2.54% Cell::GetCellProliferativeType 0 0% 52.62% 1852ms 2.52% std::_Rb_tree::lower_bound (inline) 0 0% 52.62% 1852ms 2.52% std::map::lower_bound (inline) 26ms 0.035% 52.65% 1839ms 2.51% vtkQuad::~vtkQuad 14ms 0.019% 52.67% 1824ms 2.49% vtkTriangle::~vtkTriangle 10ms 0.014% 52.68% 1767ms 2.41% vtkLine::GetParametricCenter 16ms 0.022% 52.71% 1757ms 2.39% std::_Rb_tree::erase 21ms 0.029% 52.73% 1747ms 2.38% std::set_intersection (inline) 112ms 0.15% 52.89% 1726ms 2.35% std::__set_intersection 0 0% 52.89% 1700ms 2.32% VoronoiVertexMeshGenerator::GenerateVoronoiMesh 0 0% 52.89% 1700ms 2.32% VoronoiVertexMeshGenerator::VoronoiVertexMeshGenerator 901ms 1.23% 54.11% 1693ms 2.31% VoronoiVertexMeshGenerator::CreateVoronoiTessellation 161ms 0.22% 54.33% 1693ms 2.31% std::_Rb_tree::_M_insert_ (inline) 54ms 0.074% 54.41% 1681ms 2.29% vtkIdList::AllocateInternal 9ms 0.012% 54.42% 1659ms 2.26% CellPopulationElementWriter::Visit 21ms 0.029% 54.45% 1656ms 2.26% vtkTypeFloat64Array::~vtkTypeFloat64Array 4ms 0.0054% 54.45% 1612ms 2.20% __printf_fp_spec (inline) 44ms 0.06% 54.51% 1608ms 2.19% __printf_fp_l_buffer 42ms 0.057% 54.57% 1587ms 2.16% vtkDataArray::CreateDataArray 627ms 0.85% 55.42% 1516ms 2.07% __printf_fp_buffer_1 41ms 0.056% 55.48% 1484ms 2.02% vtkFloatArray::New 37ms 0.05% 55.53% 1458ms 1.99% vtkDoubleArray::vtkDoubleArray 72ms 0.098% 55.63% 1449ms 1.97% vtkTypeFloat64Array::New 586ms 0.8% 56.43% 1394ms 1.90% std::basic_filebuf::xsputn 151ms 0.21% 56.63% 1335ms 1.82% boost::numeric::ublas::vector_binary::size (inline) 48ms 0.065% 56.70% 1318ms 1.80% vtkFloatArray::~vtkFloatArray 0 0% 56.70% 1312ms 1.79% std::insert_iterator::operator= (inline) 22ms 0.03% 56.73% 1306ms 1.78% vtkFloatArray::vtkFloatArray 7ms 0.0095% 56.74% 1296ms 1.77% LegacyCellProliferativeTypesWriter::VisitCell 2ms 0.0027% 56.74% 1290ms 1.76% vtkXMLWriter::WriteCellDataAppendedData 17ms 0.023% 56.76% 1284ms 1.75% Cell::GetCellData 31ms 0.042% 56.81% 1275ms 1.74% vtkTypeFloat64Array::vtkTypeFloat64Array 293ms 0.4% 57.21% 1274ms 1.74% vtkObject::vtkObject 2ms 0.0027% 57.21% 1269ms 1.73% vtkXMLUnstructuredDataWriter::WriteCellsAppendedDataWorker 0 0% 57.21% 1267ms 1.73% boost::numeric::ublas::c_vector::assign (inline) 0 0% 57.21% 1246ms 1.70% vtkXMLWriter::WritePointsAppendedData 700ms 0.95% 58.16% 1211ms 1.65% std::_Rb_tree::equal_range (inline) 33ms 0.045% 58.21% 1189ms 1.62% AbstractCellProperty::IsType (inline) 32ms 0.044% 58.25% 1180ms 1.61% CellPropertyCollection::HasProperty 0 0% 58.25% 1172ms 1.60% Cell::HasCellProperty (inline) 14ms 0.019% 58.27% 1166ms 1.59% LegacyCellProliferativeTypesWriter::GetCellDataForVtkOutput 1165ms 1.59% 59.86% 1165ms 1.59% std::_Rb_tree::_S_right (inline) 147ms 0.2% 60.06% 1165ms 1.59% std::vector::_M_default_append (partial-inline) 1ms 0.0014% 60.06% 1163ms 1.58% std::_Rb_tree::_M_insert_unique_ (inline) 162ms 0.22% 60.28% 1040ms 1.42% std::_Rb_tree_const_iterator::operator++ (inline) 10ms 0.014% 60.29% 1002ms 1.37% AbstractTargetAreaModifier::UpdateTargetAreas 0 0% 60.29% 997ms 1.36% boost::numeric::ublas::c_vector::operator-= (inline) 3ms 0.0041% 60.30% 982ms 1.34% TargetAreaLinearGrowthModifier::UpdateTargetAreaOfCell 0 0% 60.30% 981ms 1.34% tcache_get (inline) 981ms 1.34% 61.63% 981ms 1.34% tcache_get_n (inline) 446ms 0.61% 62.24% 960ms 1.31% vtkTypeFloat64Array::PrintSelf 277ms 0.38% 62.62% 940ms 1.28% vtkObject::Modified 9ms 0.012% 62.63% 920ms 1.25% AbstractCellPopulation::Iterator::operator++ (inline) 39ms 0.053% 62.68% 910ms 1.24% AbstractCellPopulation::Iterator::IsRealCell (inline) 554ms 0.75% 63.44% 888ms 1.21% vtkObjectBase::UnRegisterInternal 17ms 0.023% 63.46% 887ms 1.21% Node::RemoveElement 148ms 0.2% 63.66% 877ms 1.19% vtkAOSDataArrayTemplate::DataElementChanged 6ms 0.0082% 63.67% 873ms 1.19% std::set::erase (inline) 205ms 0.28% 63.95% 855ms 1.16% AbstractElement::GetNodeLocation 144ms 0.2% 64.15% 848ms 1.16% AbstractCellProperty::IsSame 0 0% 64.15% 837ms 1.14% boost::numeric::ublas::scalar_traits::type_sqrt (inline) 16ms 0.022% 64.17% 827ms 1.13% std::_Rb_tree::_M_emplace_hint_unique 2ms 0.0027% 64.17% 826ms 1.13% std::_Rb_tree::_M_insert_unique (inline) 821ms 1.12% 65.29% 821ms 1.12% std::_Rb_tree_increment 138ms 0.19% 65.48% 816ms 1.11% VertexMesh::GetAreaGradientOfElementAtNode 60ms 0.082% 65.56% 803ms 1.09% vtkDoubleArray::~vtkDoubleArray 11ms 0.015% 65.58% 784ms 1.07% VertexBasedCellPopulation::IsCellAssociatedWithADeletedLocation 164ms 0.22% 65.80% 780ms 1.06% boost::numeric::ublas::c_vector::operator[] (inline) 58ms 0.079% 65.88% 774ms 1.05% VertexMesh::GetVolumeOfElement 52ms 0.071% 65.95% 759ms 1.03% boost::numeric::ublas::vector_reference::operator() (inline) 519ms 0.71% 66.66% 728ms 0.99% std::basic_streambuf::xsputn 174ms 0.24% 66.89% 704ms 0.96% std::type_info::operator== (inline) 0 0% 66.89% 674ms 0.92% boost::numeric::ublas::vector_binary::operator() (inline) 589ms 0.8% 67.70% 649ms 0.88% malloc_consolidate 0 0% 67.70% 645ms 0.88% std::_Rb_tree::clear (inline) 223ms 0.3% 68.00% 642ms 0.87% boost::detail::shared_count::~shared_count (inline) 0 0% 68.00% 642ms 0.87% boost::shared_ptr::~shared_ptr (inline) 252ms 0.34% 68.34% 642ms 0.87% std::__ostream_insert 74ms 0.1% 68.44% 641ms 0.87% vtkDataArray::vtkDataArray 265ms 0.36% 68.80% 633ms 0.86% hack_digit 7ms 0.0095% 68.81% 632ms 0.86% AbstractCellBasedSimulation::DoCellBirth 0 0% 68.81% 632ms 0.86% std::map::clear (inline) 3ms 0.0041% 68.82% 631ms 0.86% vtkIdList::Allocate 631ms 0.86% 69.68% 631ms 0.86% vtkTimeStamp::Modified 38ms 0.052% 69.73% 610ms 0.83% VertexBasedCellPopulation::GetElementCorrespondingToCell (inline) 33ms 0.045% 69.77% 604ms 0.82% MutableVertexMesh::CheckForSwapsFromShortEdges 10ms 0.014% 69.79% 601ms 0.82% AbstractCellPopulation::GetLocationIndexUsingCell 11ms 0.015% 69.80% 596ms 0.81% boost::numeric::ublas::detail::expression_type_check (inline) 593ms 0.81% 70.61% 593ms 0.81% Node::rGetLocation 49ms 0.067% 70.68% 583ms 0.79% boost::numeric::ublas::detail::equals 131ms 0.18% 70.86% 578ms 0.79% std::num_put::_M_insert_int 40ms 0.054% 70.91% 571ms 0.78% vtkIdList::New 570ms 0.78% 71.69% 570ms 0.78% [libchaste_cell_based.so] 0 0% 71.69% 568ms 0.77% std::_Vector_base::_M_allocate (inline) 561ms 0.76% 72.45% 561ms 0.76% tcache_put (inline) 2ms 0.0027% 72.45% 558ms 0.76% vtkDataArray::ComputeRange 555ms 0.76% 73.21% 555ms 0.76% [libchaste_mesh.so] 3ms 0.0041% 73.21% 552ms 0.75% std::__basic_file::xsputn_2 116ms 0.16% 73.37% 551ms 0.75% vtkAbstractArray::vtkAbstractArray 546ms 0.74% 74.12% 548ms 0.75% __GI___writev 23ms 0.031% 74.15% 540ms 0.74% VertexMesh::GetSurfaceAreaOfElement 331ms 0.45% 74.60% 539ms 0.73% std::_Hashtable::clear 38ms 0.052% 74.65% 531ms 0.72% std::_Rb_tree::_M_erase_aux (inline) 500ms 0.68% 75.33% 500ms 0.68% Node::GetIndex 0 0% 75.33% 499ms 0.68% boost::numeric::ublas::norm_inf (inline) 130ms 0.18% 75.51% 499ms 0.68% boost::numeric::ublas::vector_norm_inf::apply (inline) 17ms 0.023% 75.53% 483ms 0.66% std::less::operator() (inline) 70ms 0.095% 75.63% 479ms 0.65% vtkSOADataArrayTemplate::FillTypedComponent 2ms 0.0027% 75.63% 474ms 0.65% CellProliferativeTypesWriter::VisitCell 401ms 0.55% 76.18% 466ms 0.63% std::operator< (inline) 48ms 0.065% 76.24% 458ms 0.62% std::_Rb_tree::_M_upper_bound (inline) 60ms 0.082% 76.32% 458ms 0.62% tbb::detail::r1::cancel_group_execution 0 0% 76.32% 457ms 0.62% std::_Rb_tree::_Auto_node::_Auto_node (inline) 12ms 0.016% 76.34% 455ms 0.62% std::operator<< (partial-inline) 3ms 0.0041% 76.34% 455ms 0.62% vtk::detail::smp::vtkSMPToolsImplForTBB 453ms 0.62% 76.96% 453ms 0.62% std::ostream::sentry::sentry 446ms 0.61% 77.57% 446ms 0.61% [libvtkCommonCore-9.3.so.9.3] 52ms 0.071% 77.64% 443ms 0.6% CellPropertyCollection::AddProperty 434ms 0.59% 78.23% 442ms 0.6% vtkObject::~vtkObject 77ms 0.1% 78.34% 429ms 0.58% vtkDataArray::~vtkDataArray 70ms 0.095% 78.43% 413ms 0.56% MutableElement::GetNodeLocalIndex 409ms 0.56% 78.99% 413ms 0.56% vtkObjectBase::Delete 412ms 0.56% 79.55% 412ms 0.56% [libstdc++.so.6.0.33] 49ms 0.067% 79.62% 410ms 0.56% std::_Rb_tree::find (inline) 7ms 0.0095% 79.63% 410ms 0.56% std::basic_filebuf::overflow 407ms 0.55% 80.18% 407ms 0.55% std::_Rb_tree_insert_and_rebalance 2ms 0.0027% 80.18% 405ms 0.55% AbstractCellBasedWriter::OpenOutputFileForAppend 0 0% 80.18% 405ms 0.55% AbstractCellPopulation::OpenRoundRobinWritersFilesForAppend 10ms 0.014% 80.20% 403ms 0.55% CellProliferativeTypesWriter::GetCellDataForVtkOutput 3ms 0.0041% 80.20% 403ms 0.55% std::basic_filebuf::_M_convert_to_external 4ms 0.0054% 80.21% 399ms 0.54% std::__basic_file::xsputn 393ms 0.54% 80.74% 398ms 0.54% boost::detail::sp_counted_base::release 1ms 0.0014% 80.74% 398ms 0.54% std::basic_filebuf::open 1ms 0.0014% 80.75% 395ms 0.54% OutputFileHandler::OpenOutputFile 391ms 0.53% 81.28% 395ms 0.54% __GI___libc_write 3ms 0.0041% 81.28% 392ms 0.53% vtkDataArrayPrivate::DoComputeScalarRange 53ms 0.072% 81.35% 389ms 0.53% std::__new_allocator::construct (inline) 0 0% 81.35% 389ms 0.53% std::allocator_traits::construct (inline) 54ms 0.074% 81.43% 386ms 0.53% vtkIdList::~vtkIdList 385ms 0.52% 81.95% 385ms 0.52% std::vector::size (inline) 0 0% 81.95% 380ms 0.52% boost::numeric::ublas::c_vector::assign_temporary (inline) 1ms 0.0014% 81.95% 380ms 0.52% boost::numeric::ublas::c_vector::swap (inline) 30ms 0.041% 81.99% 379ms 0.52% std::swap_ranges (inline) 0 0% 81.99% 372ms 0.51% AbstractCellBasedSimulation::DoCellRemoval (inline) 111ms 0.15% 82.15% 368ms 0.5% boost::shared_ptr::shared_ptr (inline)