File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12876ms, 86.01% of 14970ms total Dropped 724 nodes (cum <= 74.85ms) flat flat% sum% cum cum% 0 0% 0% 14962ms 99.95% __libc_start_call_main 0 0% 0% 14962ms 99.95% __libc_start_main_impl 0 0% 0% 14962ms 99.95% _start 0 0% 0% 14959ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14959ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14959ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14959ms 99.93% main 0 0% 0% 14921ms 99.67% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14921ms 99.67% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14921ms 99.67% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14898ms 99.52% AbstractCardiacProblem::Solve 0 0% 0.02% 11393ms 76.11% AbstractDynamicLinearPdeSolver::Solve 40ms 0.27% 0.29% 9230ms 61.66% AbstractCardiacTissue::SolveCellSystems 153ms 1.02% 1.31% 5697ms 38.06% AbstractCardiacCell::ComputeExceptVoltage 202ms 1.35% 2.66% 4910ms 32.80% AbstractOneStepIvpOdeSolver::InternalSolve 183ms 1.22% 3.88% 4126ms 27.56% EulerIvpOdeSolver::CalculateNextYValue 1052ms 7.03% 10.91% 3882ms 25.93% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1755ms 11.72% 22.63% 3432ms 22.93% __GI___exp 1ms 0.0067% 22.64% 3430ms 22.91% MonodomainProblem::WriteOneStep 2ms 0.013% 22.65% 3263ms 21.80% Hdf5DataWriter::PutVector 1ms 0.0067% 22.66% 3252ms 21.72% H5Dwrite 4ms 0.027% 22.69% 3216ms 21.48% H5D__write 105ms 0.7% 23.39% 2691ms 17.98% AbstractCardiacTissue::UpdateCaches (inline) 871ms 5.82% 29.21% 2543ms 16.99% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0067% 29.21% 1760ms 11.76% H5D__chunk_collective_write 21ms 0.14% 29.35% 1759ms 11.75% H5F_set_coll_metadata_reads 1454ms 9.71% 39.06% 1611ms 10.76% __ieee754_exp_fma 18ms 0.12% 39.19% 1547ms 10.33% H5FD_s3comms_uriencode 2ms 0.013% 39.20% 1427ms 9.53% LinearSystem::Solve 10ms 0.067% 39.27% 1331ms 8.89% H5D__chunk_cacheable 0 0% 39.27% 1291ms 8.62% KSPSolve 3ms 0.02% 39.29% 1291ms 8.62% KSPSolve_Private 1ms 0.0067% 39.29% 1277ms 8.53% KSPSolve_CG 446ms 2.98% 42.27% 1137ms 7.60% H5S_select_iterate 2ms 0.013% 42.28% 1134ms 7.58% H5F_block_write 4ms 0.027% 42.31% 1132ms 7.56% H5PB_write 1ms 0.0067% 42.32% 1128ms 7.54% H5F__accum_write 46ms 0.31% 42.63% 1127ms 7.53% 1ms 0.0067% 42.63% 1127ms 7.53% H5FD_write 2ms 0.013% 42.65% 1024ms 6.84% H5D__mpio_select_write 2ms 0.013% 42.66% 937ms 6.26% PMPI_File_write_at_all 915ms 6.11% 48.77% 916ms 6.12% __GI_pwritev64 3ms 0.02% 48.79% 853ms 5.70% std::pow (inline) 90ms 0.6% 49.39% 850ms 5.68% __pow 99ms 0.66% 50.05% 759ms 5.07% __ieee754_pow_fma 330ms 2.20% 52.26% 720ms 4.81% MonodomainSolver::SetupLinearSystem 88ms 0.59% 52.85% 719ms 4.80% H5D__chunk_set_sizes 0 0% 52.85% 679ms 4.54% PCApply 1ms 0.0067% 52.85% 678ms 4.53% PCApply_BJacobi_Singleblock 301ms 2.01% 54.86% 676ms 4.52% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.0067% 54.87% 646ms 4.32% KSPSolve_PREONLY 1ms 0.0067% 54.88% 643ms 4.30% PCApply_ICC 2ms 0.013% 54.89% 642ms 4.29% MatSolve 631ms 4.22% 59.10% 640ms 4.28% MatSolve_SeqSBAIJ_1_NaturalOrdering 2ms 0.013% 59.12% 575ms 3.84% MatMult 569ms 3.80% 62.92% 573ms 3.83% MatMult_SeqAIJ 71ms 0.47% 63.39% 529ms 3.53% H5S_mpio_space_type 0 0% 63.39% 461ms 3.08% KSP_PCApply.lto_priv.7 377ms 2.52% 65.91% 377ms 2.52% log_inline (inline) 0 0% 65.91% 283ms 1.89% KSPConvergedDefault 127ms 0.85% 66.76% 257ms 1.72% TimeStepper::TimeStepper 254ms 1.70% 68.46% 256ms 1.71% exp_inline (inline) 58ms 0.39% 68.84% 236ms 1.58% __GI___libc_malloc 0 0% 68.84% 219ms 1.46% KSP_PCApply 22ms 0.15% 68.99% 218ms 1.46% H5VM_chunk_index 172ms 1.15% 70.14% 212ms 1.42% _int_malloc 186ms 1.24% 71.38% 186ms 1.24% std::isinf (inline) 98ms 0.65% 72.04% 185ms 1.24% top12 (inline) 29ms 0.19% 72.23% 177ms 1.18% __GI___libc_free 6ms 0.04% 72.27% 173ms 1.16% MPI_Type_free 11ms 0.073% 72.34% 173ms 1.16% ompi_datatype_destroy 97ms 0.65% 72.99% 169ms 1.13% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 0 0% 72.99% 166ms 1.11% Hdf5DataWriter::PutUnlimitedVariable 6ms 0.04% 73.03% 166ms 1.11% ompi_datatype_create 128ms 0.86% 73.89% 164ms 1.10% AbstractOneStepIvpOdeSolver::Solve 32ms 0.21% 74.10% 154ms 1.03% AbstractCardiacCell::SetVoltage (partial-inline) 125ms 0.84% 74.94% 150ms 1.00% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 24ms 0.16% 75.10% 149ms 1% H5S_set_version 149ms 1% 76.09% 149ms 1% [libchaste_heart.so] 55ms 0.37% 76.46% 148ms 0.99% _int_free 7ms 0.047% 76.51% 148ms 0.99% ompi_info_register_framework_params 45ms 0.3% 76.81% 146ms 0.98% ompi_datatype_release_args 137ms 0.92% 77.72% 137ms 0.92% TimeStepper::CalculateNextTime 136ms 0.91% 78.63% 136ms 0.91% ddot_ 66ms 0.44% 79.07% 130ms 0.87% H5S_hyper_add_span_element 52ms 0.35% 79.42% 125ms 0.84% H5VM_array_calc 120ms 0.8% 80.22% 120ms 0.8% __ieee754_log_fma 2ms 0.013% 80.23% 118ms 0.79% VecNorm 106ms 0.71% 80.94% 110ms 0.73% AbstractParameterisedSystem::SetAnyVariable 2ms 0.013% 80.96% 110ms 0.73% VecNorm_Seq 1ms 0.0067% 80.96% 109ms 0.73% VecDuplicate 3ms 0.02% 80.98% 108ms 0.72% VecDuplicate_MPI 45ms 0.3% 81.28% 108ms 0.72% std::__cxx11::basic_string::basic_string 2ms 0.013% 81.30% 106ms 0.71% PMPI_Type_create_resized 1ms 0.0067% 81.30% 106ms 0.71% ompi_datatype_duplicate 99ms 0.66% 81.96% 99ms 0.66% H5VM_array_offset_pre 99ms 0.66% 82.63% 99ms 0.66% H5VM_chunk_index_scaled 1ms 0.0067% 82.63% 98ms 0.65% PMPI_File_set_view 92ms 0.61% 83.25% 92ms 0.61% __memcpy_avx_unaligned_erms 88ms 0.59% 83.83% 88ms 0.59% asuint64 (inline) 88ms 0.59% 84.42% 88ms 0.59% std::vector::operator[] (inline) 3ms 0.02% 84.44% 87ms 0.58% MPI_Type_contiguous 24ms 0.16% 84.60% 87ms 0.58% ompi_datatype_set_args 43ms 0.29% 84.89% 86ms 0.57% AbstractCardiacCell::GetVoltage (partial-inline) 0 0% 84.89% 86ms 0.57% H5D__chunk_allocated 68ms 0.45% 85.34% 85ms 0.57% AbstractParameterisedSystem::GetAnyVariable 1ms 0.0067% 85.35% 84ms 0.56% H5D__select_write 1ms 0.0067% 85.36% 83ms 0.55% H5Dgather 1ms 0.0067% 85.36% 82ms 0.55% H5D__contig_fill 0 0% 85.36% 80ms 0.53% H5D__contig_write 0 0% 85.36% 80ms 0.53% H5VM_opvv 43ms 0.29% 85.65% 80ms 0.53% TimeStepper::AdvanceOneTimeStep 20ms 0.13% 85.78% 78ms 0.52% __libc_calloc 30ms 0.2% 85.99% 76ms 0.51% H5S__hyper_rebuild 4ms 0.027% 86.01% 76ms 0.51% PMPI_Type_vector 0 0% 86.01% 75ms 0.5% opal_datatype_create_desc