File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12888ms, 85.94% of 14997ms total Dropped 741 nodes (cum <= 74.98ms) flat flat% sum% cum cum% 0 0% 0% 14988ms 99.94% __libc_start_call_main 0 0% 0% 14988ms 99.94% __libc_start_main_impl 0 0% 0% 14988ms 99.94% _start 0 0% 0% 14986ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14986ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14986ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14986ms 99.93% main 0 0% 0% 14944ms 99.65% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14944ms 99.65% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14944ms 99.65% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0067% 0.0067% 14921ms 99.49% AbstractCardiacProblem::Solve 5ms 0.033% 0.04% 11414ms 76.11% AbstractDynamicLinearPdeSolver::Solve 37ms 0.25% 0.29% 9239ms 61.61% AbstractCardiacTissue::SolveCellSystems 148ms 0.99% 1.27% 5750ms 38.34% AbstractCardiacCell::ComputeExceptVoltage 174ms 1.16% 2.43% 4904ms 32.70% AbstractOneStepIvpOdeSolver::InternalSolve 179ms 1.19% 3.63% 4150ms 27.67% EulerIvpOdeSolver::CalculateNextYValue 882ms 5.88% 9.51% 3915ms 26.11% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1792ms 11.95% 21.46% 3599ms 24.00% __GI___exp 2ms 0.013% 21.47% 3431ms 22.88% MonodomainProblem::WriteOneStep 0 0% 21.47% 3260ms 21.74% Hdf5DataWriter::PutVector 2ms 0.013% 21.48% 3246ms 21.64% H5Dwrite 5ms 0.033% 21.52% 3213ms 21.42% H5D__write 85ms 0.57% 22.08% 2627ms 17.52% AbstractCardiacTissue::UpdateCaches (inline) 820ms 5.47% 27.55% 2509ms 16.73% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.55% 1774ms 11.83% H5D__chunk_collective_write 13ms 0.087% 27.64% 1774ms 11.83% H5F_set_coll_metadata_reads 1586ms 10.58% 38.21% 1727ms 11.52% __ieee754_exp_fma 11ms 0.073% 38.29% 1569ms 10.46% H5FD_s3comms_uriencode 1ms 0.0067% 38.29% 1411ms 9.41% LinearSystem::Solve 16ms 0.11% 38.40% 1321ms 8.81% H5D__chunk_cacheable 0 0% 38.40% 1267ms 8.45% KSPSolve 7ms 0.047% 38.45% 1267ms 8.45% KSPSolve_Private 3ms 0.02% 38.47% 1249ms 8.33% KSPSolve_CG 70ms 0.47% 38.93% 1175ms 7.83% 1ms 0.0067% 38.94% 1175ms 7.83% H5F_block_write 3ms 0.02% 38.96% 1174ms 7.83% H5PB_write 0 0% 38.96% 1171ms 7.81% H5FD_write 0 0% 38.96% 1171ms 7.81% H5F__accum_write 432ms 2.88% 41.84% 1114ms 7.43% H5S_select_iterate 3ms 0.02% 41.86% 1083ms 7.22% H5D__mpio_select_write 1ms 0.0067% 41.87% 974ms 6.49% PMPI_File_write_at_all 932ms 6.21% 48.08% 935ms 6.23% __GI_pwritev64 4ms 0.027% 48.11% 873ms 5.82% std::pow (inline) 83ms 0.55% 48.66% 869ms 5.79% __pow 92ms 0.61% 49.28% 785ms 5.23% __ieee754_pow_fma 310ms 2.07% 51.34% 741ms 4.94% MonodomainSolver::SetupLinearSystem 81ms 0.54% 51.88% 697ms 4.65% H5D__chunk_set_sizes 1ms 0.0067% 51.89% 696ms 4.64% PCApply 3ms 0.02% 51.91% 692ms 4.61% PCApply_BJacobi_Singleblock 300ms 2.00% 53.91% 665ms 4.43% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 53.91% 665ms 4.43% KSPSolve_PREONLY 2ms 0.013% 53.92% 659ms 4.39% PCApply_ICC 1ms 0.0067% 53.93% 657ms 4.38% MatSolve 652ms 4.35% 58.28% 656ms 4.37% MatSolve_SeqSBAIJ_1_NaturalOrdering 3ms 0.02% 58.30% 529ms 3.53% MatMult 525ms 3.50% 61.80% 526ms 3.51% MatMult_SeqAIJ 67ms 0.45% 62.25% 505ms 3.37% H5S_mpio_space_type 0 0% 62.25% 466ms 3.11% KSP_PCApply.lto_priv.7 415ms 2.77% 65.01% 415ms 2.77% log_inline (inline) 6ms 0.04% 65.05% 298ms 1.99% KSPConvergedDefault 124ms 0.83% 65.88% 252ms 1.68% TimeStepper::TimeStepper 248ms 1.65% 67.53% 250ms 1.67% exp_inline (inline) 2ms 0.013% 67.55% 234ms 1.56% KSP_PCApply 51ms 0.34% 67.89% 229ms 1.53% __GI___libc_malloc 20ms 0.13% 68.02% 218ms 1.45% H5VM_chunk_index 174ms 1.16% 69.18% 210ms 1.40% _int_malloc 124ms 0.83% 70.01% 199ms 1.33% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 13ms 0.087% 70.09% 191ms 1.27% ompi_datatype_create 190ms 1.27% 71.36% 190ms 1.27% [libchaste_heart.so] 157ms 1.05% 72.41% 183ms 1.22% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 43ms 0.29% 72.69% 181ms 1.21% AbstractCardiacCell::SetVoltage (partial-inline) 181ms 1.21% 73.90% 181ms 1.21% std::isinf (inline) 2ms 0.013% 73.91% 169ms 1.13% Hdf5DataWriter::PutUnlimitedVariable 98ms 0.65% 74.57% 167ms 1.11% top12 (inline) 26ms 0.17% 74.74% 164ms 1.09% __GI___libc_free 7ms 0.047% 74.79% 152ms 1.01% MPI_Type_free 116ms 0.77% 75.56% 151ms 1.01% AbstractOneStepIvpOdeSolver::Solve 151ms 1.01% 76.57% 151ms 1.01% ddot_ 7ms 0.047% 76.62% 150ms 1.00% ompi_datatype_destroy 145ms 0.97% 77.58% 145ms 0.97% TimeStepper::CalculateNextTime 23ms 0.15% 77.74% 144ms 0.96% H5S_set_version 52ms 0.35% 78.08% 137ms 0.91% _int_free 5ms 0.033% 78.12% 134ms 0.89% ompi_info_register_framework_params 35ms 0.23% 78.35% 133ms 0.89% ompi_datatype_release_args 122ms 0.81% 79.16% 122ms 0.81% __memcpy_avx_unaligned_erms 50ms 0.33% 79.50% 121ms 0.81% H5VM_array_calc 2ms 0.013% 79.51% 121ms 0.81% PMPI_File_set_view 114ms 0.76% 80.27% 119ms 0.79% AbstractParameterisedSystem::SetAnyVariable 116ms 0.77% 81.04% 116ms 0.77% __ieee754_log_fma 50ms 0.33% 81.38% 113ms 0.75% H5S_hyper_add_span_element 46ms 0.31% 81.68% 106ms 0.71% std::__cxx11::basic_string::basic_string 5ms 0.033% 81.72% 105ms 0.7% VecNorm 0 0% 81.72% 103ms 0.69% VecDuplicate 2ms 0.013% 81.73% 103ms 0.69% VecDuplicate_MPI 78ms 0.52% 82.25% 102ms 0.68% AbstractParameterisedSystem::GetAnyVariable 101ms 0.67% 82.92% 101ms 0.67% H5VM_array_offset_pre 41ms 0.27% 83.20% 98ms 0.65% AbstractCardiacCell::GetVoltage (partial-inline) 97ms 0.65% 83.84% 97ms 0.65% H5VM_chunk_index_scaled 2ms 0.013% 83.86% 94ms 0.63% PMPI_Type_create_resized 0 0% 83.86% 94ms 0.63% VecNorm_Seq 4ms 0.027% 83.88% 87ms 0.58% PMPI_Type_vector 0 0% 83.88% 86ms 0.57% VecTDot 1ms 0.0067% 83.89% 86ms 0.57% ompi_datatype_duplicate 32ms 0.21% 84.10% 85ms 0.57% ompi_datatype_set_args 0 0% 84.10% 84ms 0.56% VecTDot_Seq 0 0% 84.10% 84ms 0.56% VecXDot_Seq_Private.constprop.0 26ms 0.17% 84.28% 84ms 0.56% __libc_calloc 6ms 0.04% 84.32% 81ms 0.54% MPI_Type_create_hindexed 81ms 0.54% 84.86% 81ms 0.54% [libm.so.6] 4ms 0.027% 84.88% 80ms 0.53% H5D__chunk_allocated 26ms 0.17% 85.06% 80ms 0.53% H5S__hyper_rebuild 42ms 0.28% 85.34% 80ms 0.53% TimeStepper::AdvanceOneTimeStep 4ms 0.027% 85.36% 79ms 0.53% opal_datatype_create_desc 32ms 0.21% 85.58% 78ms 0.52% H5S_select_iter_next 54ms 0.36% 85.94% 76ms 0.51% H5SL_search