File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12835ms, 85.50% of 15011ms total Dropped 782 nodes (cum <= 75.06ms) flat flat% sum% cum cum% 0 0% 0% 15001ms 99.93% __libc_start_call_main 0 0% 0% 15001ms 99.93% __libc_start_main_impl 0 0% 0% 15001ms 99.93% _start 0 0% 0% 14998ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14998ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14998ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14998ms 99.91% main 0 0% 0% 14960ms 99.66% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14960ms 99.66% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14960ms 99.66% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14937ms 99.51% AbstractCardiacProblem::Solve 6ms 0.04% 0.06% 11384ms 75.84% AbstractDynamicLinearPdeSolver::Solve 62ms 0.41% 0.47% 9174ms 61.12% AbstractCardiacTissue::SolveCellSystems 130ms 0.87% 1.34% 5681ms 37.85% AbstractCardiacCell::ComputeExceptVoltage 175ms 1.17% 2.50% 4904ms 32.67% AbstractOneStepIvpOdeSolver::InternalSolve 178ms 1.19% 3.69% 4128ms 27.50% EulerIvpOdeSolver::CalculateNextYValue 940ms 6.26% 9.95% 3889ms 25.91% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1735ms 11.56% 21.51% 3501ms 23.32% __GI___exp 0 0% 21.51% 3471ms 23.12% MonodomainProblem::WriteOneStep 5ms 0.033% 21.54% 3291ms 21.92% Hdf5DataWriter::PutVector 2ms 0.013% 21.56% 3290ms 21.92% H5Dwrite 4ms 0.027% 21.58% 3254ms 21.68% H5D__write 126ms 0.84% 22.42% 2659ms 17.71% AbstractCardiacTissue::UpdateCaches (inline) 860ms 5.73% 28.15% 2494ms 16.61% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.013% 28.17% 1840ms 12.26% H5D__chunk_collective_write 21ms 0.14% 28.31% 1838ms 12.24% H5F_set_coll_metadata_reads 1548ms 10.31% 38.62% 1695ms 11.29% __ieee754_exp_fma 15ms 0.1% 38.72% 1599ms 10.65% H5FD_s3comms_uriencode 0 0% 38.72% 1424ms 9.49% LinearSystem::Solve 0 0% 38.72% 1295ms 8.63% KSPSolve 2ms 0.013% 38.73% 1295ms 8.63% KSPSolve_Private 13ms 0.087% 38.82% 1290ms 8.59% H5D__chunk_cacheable 1ms 0.0067% 38.82% 1287ms 8.57% KSPSolve_CG 52ms 0.35% 39.17% 1202ms 8.01% 2ms 0.013% 39.18% 1197ms 7.97% H5F_block_write 3ms 0.02% 39.20% 1195ms 7.96% H5PB_write 1ms 0.0067% 39.21% 1192ms 7.94% H5F__accum_write 1ms 0.0067% 39.22% 1191ms 7.93% H5FD_write 439ms 2.92% 42.14% 1122ms 7.47% H5S_select_iterate 3ms 0.02% 42.16% 1102ms 7.34% H5D__mpio_select_write 1ms 0.0067% 42.17% 987ms 6.58% PMPI_File_write_at_all 960ms 6.40% 48.56% 964ms 6.42% __GI_pwritev64 6ms 0.04% 48.60% 868ms 5.78% std::pow (inline) 84ms 0.56% 49.16% 862ms 5.74% __pow 105ms 0.7% 49.86% 776ms 5.17% __ieee754_pow_fma 336ms 2.24% 52.10% 754ms 5.02% MonodomainSolver::SetupLinearSystem 2ms 0.013% 52.12% 711ms 4.74% PCApply 0 0% 52.12% 707ms 4.71% PCApply_BJacobi_Singleblock 81ms 0.54% 52.65% 701ms 4.67% H5D__chunk_set_sizes 0 0% 52.65% 671ms 4.47% KSPSolve_PREONLY 3ms 0.02% 52.67% 665ms 4.43% PCApply_ICC 4ms 0.027% 52.70% 662ms 4.41% MatSolve 651ms 4.34% 57.04% 658ms 4.38% MatSolve_SeqSBAIJ_1_NaturalOrdering 282ms 1.88% 58.92% 616ms 4.10% CellLuoRudy1991FromCellML::VerifyStateVariables 2ms 0.013% 58.93% 579ms 3.86% MatMult 575ms 3.83% 62.76% 577ms 3.84% MatMult_SeqAIJ 1ms 0.0067% 62.77% 498ms 3.32% KSP_PCApply.lto_priv.7 53ms 0.35% 63.12% 492ms 3.28% H5S_mpio_space_type 360ms 2.40% 65.52% 360ms 2.40% log_inline (inline) 285ms 1.90% 67.42% 287ms 1.91% exp_inline (inline) 0 0% 67.42% 275ms 1.83% KSPConvergedDefault 121ms 0.81% 68.22% 254ms 1.69% TimeStepper::TimeStepper 0 0% 68.22% 217ms 1.45% KSP_PCApply 52ms 0.35% 68.57% 211ms 1.41% __GI___libc_malloc 23ms 0.15% 68.72% 208ms 1.39% H5VM_chunk_index 7ms 0.047% 68.77% 195ms 1.30% ompi_datatype_destroy 2ms 0.013% 68.78% 192ms 1.28% MPI_Type_free 13ms 0.087% 68.87% 190ms 1.27% ompi_datatype_create 148ms 0.99% 69.86% 189ms 1.26% _int_malloc 43ms 0.29% 70.14% 181ms 1.21% __GI___libc_free 2ms 0.013% 70.16% 180ms 1.20% Hdf5DataWriter::PutUnlimitedVariable 52ms 0.35% 70.50% 176ms 1.17% ompi_datatype_release_args 4ms 0.027% 70.53% 176ms 1.17% ompi_info_register_framework_params 42ms 0.28% 70.81% 174ms 1.16% AbstractCardiacCell::SetVoltage (partial-inline) 89ms 0.59% 71.40% 173ms 1.15% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 94ms 0.63% 72.03% 173ms 1.15% top12 (inline) 153ms 1.02% 73.05% 164ms 1.09% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 163ms 1.09% 74.13% 163ms 1.09% [libchaste_heart.so] 157ms 1.05% 75.18% 157ms 1.05% TimeStepper::CalculateNextTime 109ms 0.73% 75.90% 149ms 0.99% AbstractOneStepIvpOdeSolver::Solve 26ms 0.17% 76.08% 148ms 0.99% H5S_set_version 143ms 0.95% 77.03% 143ms 0.95% ddot_ 139ms 0.93% 77.96% 139ms 0.93% std::isinf (inline) 44ms 0.29% 78.25% 137ms 0.91% _int_free 74ms 0.49% 78.74% 132ms 0.88% H5S_hyper_add_span_element 1ms 0.0067% 78.75% 132ms 0.88% PMPI_File_set_view 58ms 0.39% 79.14% 122ms 0.81% H5VM_array_calc 0 0% 79.14% 108ms 0.72% PMPI_Type_create_resized 56ms 0.37% 79.51% 108ms 0.72% std::__cxx11::basic_string::basic_string 1ms 0.0067% 79.52% 107ms 0.71% ompi_datatype_duplicate 0 0% 79.52% 102ms 0.68% VecDuplicate 0 0% 79.52% 102ms 0.68% VecDuplicate_MPI 0 0% 79.52% 102ms 0.68% VecNorm 51ms 0.34% 79.85% 101ms 0.67% TimeStepper::AdvanceOneTimeStep 101ms 0.67% 80.53% 101ms 0.67% __memcpy_avx_unaligned_erms 90ms 0.6% 81.13% 100ms 0.67% AbstractParameterisedSystem::SetAnyVariable 98ms 0.65% 81.78% 98ms 0.65% H5VM_array_offset_pre 77ms 0.51% 82.29% 95ms 0.63% AbstractParameterisedSystem::GetAnyVariable 94ms 0.63% 82.92% 94ms 0.63% std::vector::operator[] (inline) 1ms 0.0067% 82.93% 92ms 0.61% VecNorm_Seq 91ms 0.61% 83.53% 91ms 0.61% __ieee754_log_fma 90ms 0.6% 84.13% 90ms 0.6% H5VM_chunk_index_scaled 3ms 0.02% 84.15% 89ms 0.59% MPI_Type_create_hindexed 2ms 0.013% 84.16% 87ms 0.58% MPI_Type_contiguous 1ms 0.0067% 84.17% 87ms 0.58% opal_datatype_create_desc 4ms 0.027% 84.20% 85ms 0.57% H5D__chunk_allocated 43ms 0.29% 84.48% 83ms 0.55% AbstractCardiacCell::GetVoltage (partial-inline) 32ms 0.21% 84.70% 83ms 0.55% ompi_datatype_set_args 13ms 0.087% 84.78% 82ms 0.55% opal_dss_print_buffer_contents 2ms 0.013% 84.80% 81ms 0.54% H5D__select_write 3ms 0.02% 84.82% 79ms 0.53% H5Dgather 0 0% 84.82% 79ms 0.53% VecTDot 79ms 0.53% 85.34% 79ms 0.53% asuint64 (inline) 0 0% 85.34% 78ms 0.52% VecTDot_Seq 0 0% 85.34% 78ms 0.52% VecXDot_Seq_Private.constprop.0 24ms 0.16% 85.50% 77ms 0.51% __libc_calloc