File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 119160ms, 91.25% of 130583ms total Dropped 1173 nodes (cum <= 652.91ms) flat flat% sum% cum cum% 0 0% 0% 130566ms 100% __libc_start_call_main 0 0% 0% 130566ms 100% __libc_start_main_impl 0 0% 0% 130566ms 100% _start 0 0% 0% 130563ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 130563ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 130563ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 130563ms 100% main 0 0% 0% 130527ms 100% AbstractConvergenceTester::Converge 0 0% 0% 130527ms 100% CxxTest::RealTestDescription::run 0 0% 0% 130527ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 130527ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 130527ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 130527ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 3ms 0.0023% 0.0023% 129337ms 99.05% AbstractCardiacProblem::Solve 10ms 0.0077% 0.01% 128477ms 98.39% AbstractDynamicLinearPdeSolver::Solve 4ms 0.0031% 0.013% 69624ms 53.32% LinearSystem::Solve 2ms 0.0015% 0.015% 69188ms 52.98% KSPSolve 8ms 0.0061% 0.021% 69186ms 52.98% KSPSolve_Private 14ms 0.011% 0.031% 68855ms 52.73% KSPSolve_SYMMLQ 900ms 0.69% 0.72% 49440ms 37.86% AbstractCardiacTissue::SolveCellSystems 5ms 0.0038% 0.72% 39513ms 30.26% PCApply 8ms 0.0061% 0.73% 39494ms 30.24% PCApply_BJacobi_Singleblock 1358ms 1.04% 1.77% 37983ms 29.09% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0015% 1.77% 37023ms 28.35% KSPSolve_PREONLY (partial-inline) 8ms 0.0061% 1.78% 35993ms 27.56% PCApply_ICC 12ms 0.0092% 1.79% 35985ms 27.56% MatSolve 35538ms 27.21% 29.00% 35973ms 27.55% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1ms 0.00077% 29.00% 34040ms 26.07% KSP_PCApply.lto_priv.18 7605ms 5.82% 34.83% 33370ms 25.55% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 17ms 0.013% 34.84% 23351ms 17.88% MatMult 313ms 0.24% 35.08% 23334ms 17.87% MatMult_SeqAIJ (partial-inline) 22806ms 17.46% 52.54% 23328ms 17.86% MatMult_SeqAIJ_Inode (inline) 2233ms 1.71% 54.25% 17046ms 13.05% CardiacNewtonSolver::Solve 5669ms 4.34% 58.60% 10284ms 7.88% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1195ms 0.92% 59.51% 10083ms 7.72% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 385ms 0.29% 59.81% 9407ms 7.20% AbstractCardiacTissue::UpdateCaches (inline) 8585ms 6.57% 66.38% 8585ms 6.57% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 1787ms 1.37% 67.75% 8409ms 6.44% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1211ms 0.93% 68.68% 8258ms 6.32% BidomainSolver::SetupLinearSystem 1ms 0.00077% 68.68% 7346ms 5.63% KSP_PCApply (partial-inline) 5ms 0.0038% 68.68% 6933ms 5.31% KSPConvergedDefault 4282ms 3.28% 71.96% 4377ms 3.35% __ieee754_log_fma 0 0% 71.96% 4038ms 3.09% boost::numeric::ublas::norm_inf (inline) 2788ms 2.14% 74.09% 4038ms 3.09% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.09% 4038ms 3.09% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.09% 4038ms 3.09% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3362ms 2.57% 76.67% 3362ms 2.57% ddot_ 4ms 0.0031% 76.67% 3313ms 2.54% MatNullSpaceRemove 3085ms 2.36% 79.03% 3085ms 2.36% __memcpy_avx_unaligned_erms 1995ms 1.53% 80.56% 3074ms 2.35% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 0 0% 80.56% 3035ms 2.32% PetscMemcpy (inline) 40ms 0.031% 80.59% 3021ms 2.31% std::pow (inline) 431ms 0.33% 80.92% 2971ms 2.28% __pow 12ms 0.0092% 80.93% 2795ms 2.14% VecDot 0 0% 80.93% 2783ms 2.13% VecDot_Seq 2ms 0.0015% 80.93% 2783ms 2.13% VecXDot_Seq_Private.constprop.0 20ms 0.015% 80.95% 2637ms 2.02% VecCopy 6ms 0.0046% 80.95% 2615ms 2.00% VecCopy_Seq (partial-inline) 334ms 0.26% 81.21% 2507ms 1.92% __ieee754_pow_fma 16ms 0.012% 81.22% 2136ms 1.64% VecAXPY 5ms 0.0038% 81.23% 2120ms 1.62% VecAXPY_Seq 2096ms 1.61% 82.83% 2096ms 1.61% daxpy_ 3ms 0.0023% 82.83% 2037ms 1.56% VecMDot 11ms 0.0084% 82.84% 2034ms 1.56% VecMXDot_Private 1ms 0.00077% 82.84% 2024ms 1.55% AbstractFeVolumeIntegralAssembler::DoAssemble 2016ms 1.54% 84.39% 2017ms 1.54% VecMDot_Seq 27ms 0.021% 84.41% 1693ms 1.30% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1492ms 1.14% 85.55% 1558ms 1.19% exp_inline (inline) 0 0% 85.55% 1416ms 1.08% AbstractFeAssemblerInterface::AssembleMatrix (inline) 6ms 0.0046% 85.55% 1272ms 0.97% VecMAXPY 1258ms 0.96% 86.52% 1266ms 0.97% VecMAXPY_Seq 0 0% 86.52% 1240ms 0.95% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.52% 1240ms 0.95% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.52% 1240ms 0.95% boost_numeric_ublas_abs (inline) 1240ms 0.95% 87.47% 1240ms 0.95% std::abs (inline) 1139ms 0.87% 88.34% 1139ms 0.87% [libchaste_heart.so] 6ms 0.0046% 88.34% 1132ms 0.87% boost::numeric::ublas::matrix_assign (inline) 225ms 0.17% 88.52% 1120ms 0.86% boost::numeric::ublas::indexing_matrix_assign 731ms 0.56% 89.08% 1049ms 0.8% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 89.08% 1015ms 0.78% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 89.08% 1015ms 0.78% CuboidMeshConstructor::Construct 5ms 0.0038% 89.08% 1015ms 0.78% DistributedTetrahedralMesh::ConstructCuboid 11ms 0.0084% 89.09% 945ms 0.72% VecScale 2ms 0.0015% 89.09% 934ms 0.72% VecScale_Seq 927ms 0.71% 89.80% 927ms 0.71% dscal_ 7ms 0.0054% 89.80% 918ms 0.7% BidomainAssembler::ComputeMatrixTerm 3ms 0.0023% 89.81% 897ms 0.69% Element::Element 8ms 0.0061% 89.81% 895ms 0.69% boost::numeric::ublas::c_matrix::c_matrix (inline) 5ms 0.0038% 89.82% 867ms 0.66% AbstractTetrahedralElement::CalculateJacobian 3ms 0.0023% 89.82% 828ms 0.63% VecNorm 822ms 0.63% 90.45% 822ms 0.63% __memset_avx2_unaligned_erms 4ms 0.0031% 90.45% 821ms 0.63% AbstractTetrahedralElement::AbstractTetrahedralElement 2ms 0.0015% 90.45% 819ms 0.63% VecNorm_Seq 0 0% 90.45% 810ms 0.62% PetscMemzero (inline) 0 0% 90.45% 790ms 0.6% BidomainProblem::WriteOneStep 787ms 0.6% 91.06% 787ms 0.6% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 1ms 0.00077% 91.06% 773ms 0.59% AbstractBidomainSolver::FinaliseLinearSystem 252ms 0.19% 91.25% 770ms 0.59% AbstractBidomainSolver::CheckCompatibilityCondition 3ms 0.0023% 91.25% 741ms 0.57% VecDuplicate