File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12587ms, 85.23% of 14768ms total Dropped 733 nodes (cum <= 73.84ms) flat flat% sum% cum cum% 0 0% 0% 14758ms 99.93% __libc_start_call_main 0 0% 0% 14758ms 99.93% __libc_start_main_impl 0 0% 0% 14758ms 99.93% _start 0 0% 0% 14755ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14755ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14755ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14755ms 99.91% main 0 0% 0% 14714ms 99.63% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14714ms 99.63% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14714ms 99.63% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14691ms 99.48% AbstractCardiacProblem::Solve 1ms 0.0068% 0.027% 11346ms 76.83% AbstractDynamicLinearPdeSolver::Solve 96ms 0.65% 0.68% 8956ms 60.64% AbstractCardiacTissue::SolveCellSystems 86ms 0.58% 1.26% 5314ms 35.98% AbstractCardiacCell::ComputeExceptVoltage 101ms 0.68% 1.94% 4658ms 31.54% AbstractOneStepIvpOdeSolver::InternalSolve 152ms 1.03% 2.97% 3998ms 27.07% EulerIvpOdeSolver::CalculateNextYValue 834ms 5.65% 8.62% 3803ms 25.75% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1788ms 12.11% 20.73% 3552ms 24.05% __GI___exp 0 0% 20.73% 3279ms 22.20% MonodomainProblem::WriteOneStep 4ms 0.027% 20.75% 3120ms 21.13% Hdf5DataWriter::PutVector 3ms 0.02% 20.77% 3113ms 21.08% H5Dwrite 3ms 0.02% 20.79% 3089ms 20.92% H5D__write 136ms 0.92% 21.72% 2908ms 19.69% AbstractCardiacTissue::UpdateCaches (inline) 824ms 5.58% 27.30% 2702ms 18.30% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0068% 27.30% 1962ms 13.29% H5D__chunk_collective_write 20ms 0.14% 27.44% 1961ms 13.28% H5F_set_coll_metadata_reads 23ms 0.16% 27.59% 1755ms 11.88% H5FD_s3comms_uriencode 1366ms 9.25% 36.84% 1696ms 11.48% __ieee754_exp_fma 0 0% 36.84% 1626ms 11.01% LinearSystem::Solve 0 0% 36.84% 1504ms 10.18% KSPSolve 5ms 0.034% 36.88% 1504ms 10.18% KSPSolve_Private 0 0% 36.88% 1489ms 10.08% KSPSolve_CG 47ms 0.32% 37.20% 1400ms 9.48% 4ms 0.027% 37.22% 1384ms 9.37% H5F_block_write 1ms 0.0068% 37.23% 1380ms 9.34% H5FD_write 0 0% 37.23% 1380ms 9.34% H5F__accum_write 0 0% 37.23% 1380ms 9.34% H5PB_write 2ms 0.014% 37.24% 1294ms 8.76% H5D__mpio_select_write 0 0% 37.24% 1189ms 8.05% PMPI_File_write_at_all 1160ms 7.85% 45.10% 1163ms 7.88% __GI_pwritev64 11ms 0.074% 45.17% 1002ms 6.78% std::pow (inline) 8ms 0.054% 45.23% 992ms 6.72% H5D__chunk_cacheable 110ms 0.74% 45.97% 991ms 6.71% __pow 83ms 0.56% 46.53% 880ms 5.96% __ieee754_pow_fma 2ms 0.014% 46.55% 877ms 5.94% PCApply 0 0% 46.55% 871ms 5.90% PCApply_BJacobi_Singleblock 264ms 1.79% 48.33% 835ms 5.65% H5S_select_iterate 0 0% 48.33% 834ms 5.65% KSPSolve_PREONLY 4ms 0.027% 48.36% 829ms 5.61% MatSolve 0 0% 48.36% 829ms 5.61% PCApply_ICC 813ms 5.51% 53.87% 825ms 5.59% MatSolve_SeqSBAIJ_1_NaturalOrdering 356ms 2.41% 56.28% 745ms 5.04% MonodomainSolver::SetupLinearSystem 1ms 0.0068% 56.28% 602ms 4.08% KSP_PCApply.lto_priv.7 63ms 0.43% 56.71% 579ms 3.92% H5D__chunk_set_sizes 4ms 0.027% 56.74% 500ms 3.39% MatMult 494ms 3.35% 60.08% 496ms 3.36% MatMult_SeqAIJ 76ms 0.51% 60.60% 484ms 3.28% H5S_mpio_space_type 429ms 2.90% 63.50% 429ms 2.90% log_inline (inline) 212ms 1.44% 64.94% 403ms 2.73% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 64.94% 351ms 2.38% KSPConvergedDefault 314ms 2.13% 67.06% 331ms 2.24% exp_inline (inline) 222ms 1.50% 68.57% 280ms 1.90% top12 (inline) 0 0% 68.57% 277ms 1.88% KSP_PCApply 103ms 0.7% 69.26% 247ms 1.67% TimeStepper::TimeStepper 231ms 1.56% 70.83% 231ms 1.56% [libchaste_heart.so] 46ms 0.31% 71.14% 210ms 1.42% __GI___libc_malloc 164ms 1.11% 72.25% 199ms 1.35% _int_malloc 199ms 1.35% 73.60% 199ms 1.35% ddot_ 56ms 0.38% 73.98% 191ms 1.29% AbstractCardiacCell::SetVoltage (partial-inline) 3ms 0.02% 74.00% 181ms 1.23% H5VM_chunk_index 9ms 0.061% 74.06% 164ms 1.11% MPI_Type_free 162ms 1.10% 75.16% 162ms 1.10% asuint64 (inline) 2ms 0.014% 75.17% 159ms 1.08% Hdf5DataWriter::PutUnlimitedVariable 12ms 0.081% 75.25% 159ms 1.08% ompi_datatype_destroy 26ms 0.18% 75.43% 158ms 1.07% __GI___libc_free 4ms 0.027% 75.45% 152ms 1.03% ompi_datatype_create 110ms 0.74% 76.20% 148ms 1.00% AbstractOneStepIvpOdeSolver::Solve 138ms 0.93% 77.13% 138ms 0.93% TimeStepper::CalculateNextTime 117ms 0.79% 77.93% 135ms 0.91% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 1ms 0.0068% 77.93% 134ms 0.91% VecNorm 32ms 0.22% 78.15% 134ms 0.91% ompi_datatype_release_args 3ms 0.02% 78.17% 134ms 0.91% ompi_info_register_framework_params 64ms 0.43% 78.60% 132ms 0.89% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 131ms 0.89% 79.49% 131ms 0.89% __memcpy_avx_unaligned_erms 41ms 0.28% 79.77% 131ms 0.89% _int_free 50ms 0.34% 80.11% 128ms 0.87% H5S_hyper_add_span_element 0 0% 80.11% 122ms 0.83% VecNorm_Seq 1ms 0.0068% 80.11% 118ms 0.8% PMPI_File_set_view 28ms 0.19% 80.30% 114ms 0.77% H5S_set_version 97ms 0.66% 80.96% 110ms 0.74% AbstractParameterisedSystem::SetAnyVariable 92ms 0.62% 81.58% 109ms 0.74% AbstractParameterisedSystem::GetAnyVariable 0 0% 81.58% 105ms 0.71% VecTDot 0 0% 81.58% 105ms 0.71% VecTDot_Seq 0 0% 81.58% 105ms 0.71% VecXDot_Seq_Private.constprop.0 41ms 0.28% 81.86% 104ms 0.7% AbstractCardiacCell::GetVoltage (partial-inline) 0 0% 81.86% 103ms 0.7% VecDuplicate 1ms 0.0068% 81.87% 103ms 0.7% VecDuplicate_MPI 103ms 0.7% 82.56% 103ms 0.7% __ieee754_log_fma 1ms 0.0068% 82.57% 99ms 0.67% PMPI_Type_create_resized 1ms 0.0068% 82.58% 95ms 0.64% ompi_datatype_duplicate 90ms 0.61% 83.19% 90ms 0.61% H5VM_array_offset_pre 0 0% 83.19% 90ms 0.61% std::vector::_M_assign_aux (inline) 0 0% 83.19% 90ms 0.61% std::vector::assign (inline) 88ms 0.6% 83.78% 88ms 0.6% H5VM_chunk_index_scaled 30ms 0.2% 83.99% 86ms 0.58% H5VM_array_calc 28ms 0.19% 84.18% 85ms 0.58% __libc_calloc 1ms 0.0068% 84.18% 82ms 0.56% opal_datatype_create_desc 13ms 0.088% 84.27% 81ms 0.55% std::__copy_move::__copy_m (inline) 0 0% 84.27% 81ms 0.55% std::__copy_move_a (inline) 0 0% 84.27% 81ms 0.55% std::__copy_move_a1 (inline) 0 0% 84.27% 81ms 0.55% std::__copy_move_a2 (inline) 0 0% 84.27% 81ms 0.55% std::copy (inline) 3ms 0.02% 84.29% 78ms 0.53% H5D__chunk_allocated 1ms 0.0068% 84.30% 78ms 0.53% H5Pcreate 4ms 0.027% 84.32% 76ms 0.51% H5P_create_id 6ms 0.041% 84.36% 76ms 0.51% MPI_Type_contiguous 54ms 0.37% 84.73% 76ms 0.51% TimeStepper::AdvanceOneTimeStep 74ms 0.5% 85.23% 74ms 0.5% ReplicatableVector::operator[]