File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 389ms, 87.61% of 444ms total Dropped 170 nodes (cum <= 2.22ms) flat flat% sum% cum cum% 0 0% 0% 437ms 98.42% __libc_start_call_main 0 0% 0% 437ms 98.42% __libc_start_main_impl 0 0% 0% 437ms 98.42% _start 0 0% 0% 434ms 97.75% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 434ms 97.75% CxxTest::TestRunner::runAllTests 0 0% 0% 434ms 97.75% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 434ms 97.75% main 0 0% 0% 396ms 89.19% CxxTest::RealTestDescription::run 0 0% 0% 396ms 89.19% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 396ms 89.19% CxxTest::TestRunner::runTest (inline) 0 0% 0% 396ms 89.19% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 396ms 89.19% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 391ms 88.06% AbstractCardiacProblem::Solve 0 0% 0% 391ms 88.06% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 352ms 79.28% LinearSystem::Solve 0 0% 0% 351ms 79.05% KSPSolve 0 0% 0% 351ms 79.05% KSPSolve_CG 0 0% 0% 351ms 79.05% KSPSolve_Private 0 0% 0% 218ms 49.10% KSP_PCApply.lto_priv.7 0 0% 0% 204ms 45.95% PCApply 0 0% 0% 204ms 45.95% PCApply_BJacobi_Singleblock 0 0% 0% 176ms 39.64% KSPSolve_PREONLY (partial-inline) 1ms 0.23% 0.23% 160ms 36.04% MatSolve 0 0% 0.23% 160ms 36.04% PCApply_ICC 156ms 35.14% 35.36% 159ms 35.81% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 35.36% 75ms 16.89% MatMult 2ms 0.45% 35.81% 75ms 16.89% MatMult_SeqAIJ (partial-inline) 73ms 16.44% 52.25% 75ms 16.89% MatMult_SeqAIJ_Inode (inline) 0 0% 52.25% 41ms 9.23% MatNullSpaceRemove 40ms 9.01% 61.26% 40ms 9.01% ddot_ 0 0% 61.26% 34ms 7.66% CxxTest::RealWorldDescription::setUp 0 0% 61.26% 34ms 7.66% PMPI_Init_thread 0 0% 61.26% 34ms 7.66% PetscInitialize 0 0% 61.26% 34ms 7.66% PetscSetup::setUpWorld 0 0% 61.26% 34ms 7.66% PetscSetupUtils::CommonSetup 0 0% 61.26% 34ms 7.66% PetscSetupUtils::InitialisePetsc 0 0% 61.26% 34ms 7.66% ompi_mpi_init 0 0% 61.26% 31ms 6.98% AbstractCardiacTissue::SolveCellSystems 1ms 0.23% 61.49% 30ms 6.76% VecMDot 0 0% 61.49% 30ms 6.76% VecTDot 0 0% 61.49% 30ms 6.76% VecTDot_Seq 0 0% 61.49% 30ms 6.76% VecXDot_Seq_Private.constprop.0 1ms 0.23% 61.71% 29ms 6.53% VecMXDot_Private 27ms 6.08% 67.79% 28ms 6.31% VecMDot_Seq 1ms 0.23% 68.02% 26ms 5.86% 0 0% 68.02% 23ms 5.18% orte_init 0 0% 68.02% 21ms 4.73% AbstractCardiacCell::ComputeExceptVoltage 0 0% 68.02% 20ms 4.50% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.23% 68.24% 19ms 4.28% EulerIvpOdeSolver::CalculateNextYValue 5ms 1.13% 69.37% 18ms 4.05% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 69.37% 17ms 3.83% KSP_PCApply (partial-inline) 0 0% 69.37% 17ms 3.83% __GI__dl_catch_exception 0 0% 69.37% 17ms 3.83% _dl_catch_error 0 0% 69.37% 17ms 3.83% _dlerror_run 0 0% 69.37% 15ms 3.38% hwloc_topology_load 0 0% 69.37% 15ms 3.38% opal_stackframe_output 8ms 1.80% 71.17% 14ms 3.15% __GI___exp 0 0% 71.17% 13ms 2.93% ___dlopen 0 0% 71.17% 13ms 2.93% _dl_open 0 0% 71.17% 13ms 2.93% dl_open_worker 0 0% 71.17% 13ms 2.93% dl_open_worker_begin 0 0% 71.17% 13ms 2.93% dlopen_doit 0 0% 71.17% 13ms 2.93% dlopen_implementation (inline) 0 0% 71.17% 13ms 2.93% hwloc_linux_get_tid_last_cpu_location 0 0% 71.17% 13ms 2.93% mca_base_framework_open 0 0% 71.17% 11ms 2.48% VecMAXPY 11ms 2.48% 73.65% 11ms 2.48% VecMAXPY_Seq 0 0% 73.65% 11ms 2.48% VecNorm 1ms 0.23% 73.87% 11ms 2.48% VecNorm_Seq 0 0% 73.87% 11ms 2.48% mca_base_component_find 0 0% 73.87% 11ms 2.48% mca_base_component_repository_open 0 0% 73.87% 11ms 2.48% mca_base_framework_components_register 0 0% 73.87% 11ms 2.48% mca_base_framework_register 0 0% 73.87% 10ms 2.25% VecAYPX 10ms 2.25% 76.13% 10ms 2.25% VecAYPX_Seq 1ms 0.23% 76.35% 10ms 2.25% _dl_map_object 0 0% 76.35% 9ms 2.03% VecDuplicate 0 0% 76.35% 8ms 1.80% AbstractCardiacTissue::UpdateCaches (inline) 2ms 0.45% 76.80% 8ms 1.80% CellLuoRudy1991FromCellML::GetIIonic 0 0% 76.80% 8ms 1.80% VecDuplicate_Seq 2ms 0.45% 77.25% 7ms 1.58% BidomainSolver::SetupLinearSystem 0 0% 77.25% 7ms 1.58% _dl_init 0 0% 77.25% 7ms 1.58% _dl_map_object_from_fd 0 0% 77.25% 7ms 1.58% _dl_start_user 0 0% 77.25% 7ms 1.58% call_init (inline) 0 0% 77.25% 6ms 1.35% PetscMemzero (inline) 1ms 0.23% 77.48% 6ms 1.35% VecAXPY 0 0% 77.48% 6ms 1.35% opal_hwloc_base_get_topology 0 0% 77.48% 6ms 1.35% orte_ess_base_proc_binding 0 0% 77.48% 5ms 1.13% PetscMemcpy (inline) 0 0% 77.48% 5ms 1.13% VecAXPY_Seq 0 0% 77.48% 5ms 1.13% VecCreate 5ms 1.13% 78.60% 5ms 1.13% __GI___libc_read 4ms 0.9% 79.50% 5ms 1.13% __ieee754_exp_fma 1ms 0.23% 79.73% 5ms 1.13% __ieee754_pow_fma 5ms 1.13% 80.86% 5ms 1.13% __memcpy_avx_unaligned_erms 5ms 1.13% 81.98% 5ms 1.13% __memset_avx2_unaligned_erms 5ms 1.13% 83.11% 5ms 1.13% __mmap64 0 0% 83.11% 5ms 1.13% __pow 0 0% 83.11% 5ms 1.13% _dl_lookup_symbol_x 0 0% 83.11% 5ms 1.13% _dl_map_segments (inline) 1ms 0.23% 83.33% 5ms 1.13% _dl_runtime_resolve_xsavec 1ms 0.23% 83.56% 5ms 1.13% boost::serialization::singleton::get_instance 5ms 1.13% 84.68% 5ms 1.13% daxpy_ 0 0% 84.68% 5ms 1.13% std::pow (inline) 0 0% 84.68% 4ms 0.9% AbstractCardiacProblem::Initialise 0 0% 84.68% 4ms 0.9% CxxTest::RealWorldDescription::tearDown 0 0% 84.68% 4ms 0.9% PetscFinalize 0 0% 84.68% 4ms 0.9% PetscSetup::tearDownWorld 0 0% 84.68% 4ms 0.9% PetscSetupUtils::CommonFinalize 1ms 0.23% 84.91% 4ms 0.9% VecSet 1ms 0.23% 85.14% 4ms 0.9% __cxa_finalize 0 0% 85.14% 4ms 0.9% __dlclose 0 0% 85.14% 4ms 0.9% _dl_call_fini 0 0% 85.14% 4ms 0.9% _dl_close 1ms 0.23% 85.36% 4ms 0.9% _dl_close_worker (inline) 0 0% 85.36% 4ms 0.9% _dl_fixup 0 0% 85.36% 4ms 0.9% _dl_map_object_deps 0 0% 85.36% 4ms 0.9% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 85.36% 4ms 0.9% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 85.36% 4ms 0.9% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 85.36% 4ms 0.9% mca_base_component_repository_release 0 0% 85.36% 4ms 0.9% mca_base_framework_close 0 0% 85.36% 4ms 0.9% ompi_mpi_finalize 0 0% 85.36% 4ms 0.9% openaux 0 0% 85.36% 3ms 0.68% MPI_Comm_set_attr 0 0% 85.36% 3ms 0.68% PetscHeaderCreate_Private 0 0% 85.36% 3ms 0.68% PetscMallocA 0 0% 85.36% 3ms 0.68% PetscMallocAlign (partial-inline) 0 0% 85.36% 3ms 0.68% TrianglesMeshReader::GetNextItemFromStream 1ms 0.23% 85.59% 3ms 0.68% VecSetType (partial-inline) 0 0% 85.59% 3ms 0.68% VecSet_Seq (partial-inline) 0 0% 85.59% 3ms 0.68% XOpenDisplay 0 0% 85.59% 3ms 0.68% [hwloc_gl.so] 1ms 0.23% 85.81% 3ms 0.68% [libmpi.so.40.30.6] 0 0% 85.81% 3ms 0.68% [libxcb.so.1.1.0] 0 0% 85.81% 3ms 0.68% _XConnectXCB 1ms 0.23% 86.04% 3ms 0.68% __GI___pthread_mutex_unlock_usercnt (inline) 0 0% 86.04% 3ms 0.68% __GI_exit 0 0% 86.04% 3ms 0.68% ___pthread_mutex_unlock 0 0% 86.04% 3ms 0.68% __run_exit_handlers 0 0% 86.04% 3ms 0.68% _dl_fini 0 0% 86.04% 3ms 0.68% _dl_open_relocate_one_object (inline) 0 0% 86.04% 3ms 0.68% _dl_relocate_object 0 0% 86.04% 3ms 0.68% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 1ms 0.23% 86.26% 3ms 0.68% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 3ms 0.68% 86.94% 3ms 0.68% do_lookup_x 3ms 0.68% 87.61% 3ms 0.68% exp_inline (inline) 0 0% 87.61% 3ms 0.68% mca_base_components_close 0 0% 87.61% 3ms 0.68% mca_base_framework_components_open 0 0% 87.61% 3ms 0.68% mca_topo_base_dist_graph_neighbors_count 0 0% 87.61% 3ms 0.68% ompi_attr_set_c 0 0% 87.61% 3ms 0.68% xcb_connect_to_display_with_auth_info