File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12823ms, 86.29% of 14861ms total Dropped 726 nodes (cum <= 74.31ms) flat flat% sum% cum cum% 0 0% 0% 14854ms 100% __libc_start_call_main 0 0% 0% 14854ms 100% __libc_start_main_impl 0 0% 0% 14854ms 100% _start 0 0% 0% 14851ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14851ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14851ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14851ms 99.93% main 0 0% 0% 14816ms 99.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14816ms 99.70% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14816ms 99.70% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14794ms 99.55% AbstractCardiacProblem::Solve 7ms 0.047% 0.067% 11443ms 77.00% AbstractDynamicLinearPdeSolver::Solve 33ms 0.22% 0.29% 9197ms 61.89% AbstractCardiacTissue::SolveCellSystems 131ms 0.88% 1.17% 5546ms 37.32% AbstractCardiacCell::ComputeExceptVoltage 163ms 1.10% 2.27% 4821ms 32.44% AbstractOneStepIvpOdeSolver::InternalSolve 194ms 1.31% 3.57% 4140ms 27.86% EulerIvpOdeSolver::CalculateNextYValue 916ms 6.16% 9.74% 3889ms 26.17% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1765ms 11.88% 21.61% 3567ms 24.00% __GI___exp 1ms 0.0067% 21.62% 3282ms 22.08% MonodomainProblem::WriteOneStep 1ms 0.0067% 21.63% 3125ms 21.03% Hdf5DataWriter::PutVector 0 0% 21.63% 3109ms 20.92% H5Dwrite 2ms 0.013% 21.64% 3087ms 20.77% H5D__write 94ms 0.63% 22.27% 2794ms 18.80% AbstractCardiacTissue::UpdateCaches (inline) 879ms 5.91% 28.19% 2667ms 17.95% CellLuoRudy1991FromCellML::GetIIonic 0 0% 28.19% 1783ms 12.00% H5D__chunk_collective_write 19ms 0.13% 28.32% 1783ms 12.00% H5F_set_coll_metadata_reads 1554ms 10.46% 38.77% 1720ms 11.57% __ieee754_exp_fma 18ms 0.12% 38.89% 1505ms 10.13% H5FD_s3comms_uriencode 2ms 0.013% 38.91% 1503ms 10.11% LinearSystem::Solve 0 0% 38.91% 1358ms 9.14% KSPSolve 2ms 0.013% 38.92% 1358ms 9.14% KSPSolve_Private 5ms 0.034% 38.95% 1342ms 9.03% KSPSolve_CG 6ms 0.04% 38.99% 1204ms 8.10% H5D__chunk_cacheable 51ms 0.34% 39.34% 1171ms 7.88% 2ms 0.013% 39.35% 1170ms 7.87% H5F_block_write 2ms 0.013% 39.36% 1168ms 7.86% H5PB_write 2ms 0.013% 39.38% 1166ms 7.85% H5F__accum_write 0 0% 39.38% 1164ms 7.83% H5FD_write 2ms 0.013% 39.39% 1088ms 7.32% H5D__mpio_select_write 405ms 2.73% 42.12% 1035ms 6.96% H5S_select_iterate 0 0% 42.12% 990ms 6.66% PMPI_File_write_at_all 962ms 6.47% 48.59% 964ms 6.49% __GI_pwritev64 3ms 0.02% 48.61% 926ms 6.23% std::pow (inline) 95ms 0.64% 49.25% 923ms 6.21% __pow 112ms 0.75% 50.00% 827ms 5.56% __ieee754_pow_fma 307ms 2.07% 52.07% 719ms 4.84% MonodomainSolver::SetupLinearSystem 1ms 0.0067% 52.08% 709ms 4.77% PCApply 2ms 0.013% 52.09% 702ms 4.72% PCApply_BJacobi_Singleblock 347ms 2.33% 54.42% 676ms 4.55% CellLuoRudy1991FromCellML::VerifyStateVariables 3ms 0.02% 54.44% 658ms 4.43% KSPSolve_PREONLY 1ms 0.0067% 54.45% 652ms 4.39% MatSolve 0 0% 54.45% 652ms 4.39% PCApply_ICC 641ms 4.31% 58.76% 651ms 4.38% MatSolve_SeqSBAIJ_1_NaturalOrdering 61ms 0.41% 59.18% 643ms 4.33% H5D__chunk_set_sizes 2ms 0.013% 59.19% 622ms 4.19% MatMult 616ms 4.15% 63.33% 620ms 4.17% MatMult_SeqAIJ 0 0% 63.33% 554ms 3.73% KSP_PCApply.lto_priv.7 54ms 0.36% 63.70% 430ms 2.89% H5S_mpio_space_type 399ms 2.68% 66.38% 399ms 2.68% log_inline (inline) 272ms 1.83% 68.21% 273ms 1.84% exp_inline (inline) 127ms 0.85% 69.07% 230ms 1.55% TimeStepper::TimeStepper 0 0% 69.07% 208ms 1.40% KSPConvergedDefault 130ms 0.87% 69.94% 208ms 1.40% top12 (inline) 22ms 0.15% 70.09% 204ms 1.37% H5VM_chunk_index 7ms 0.047% 70.14% 191ms 1.29% MPI_Type_free 11ms 0.074% 70.21% 189ms 1.27% ompi_datatype_destroy 44ms 0.3% 70.51% 186ms 1.25% __GI___libc_malloc 146ms 0.98% 71.49% 185ms 1.24% _int_malloc 51ms 0.34% 71.83% 166ms 1.12% ompi_datatype_release_args 6ms 0.04% 71.87% 166ms 1.12% ompi_info_register_framework_params 32ms 0.22% 72.09% 165ms 1.11% __GI___libc_free 87ms 0.59% 72.67% 162ms 1.09% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 134ms 0.9% 73.58% 160ms 1.08% AbstractOneStepIvpOdeSolver::Solve 35ms 0.24% 73.81% 157ms 1.06% AbstractCardiacCell::SetVoltage (partial-inline) 157ms 1.06% 74.87% 157ms 1.06% [libchaste_heart.so] 0 0% 74.87% 156ms 1.05% Hdf5DataWriter::PutUnlimitedVariable 0 0% 74.87% 156ms 1.05% KSP_PCApply 4ms 0.027% 74.89% 156ms 1.05% ompi_datatype_create 154ms 1.04% 75.93% 154ms 1.04% ddot_ 144ms 0.97% 76.90% 145ms 0.98% __ieee754_log_fma 15ms 0.1% 77.00% 142ms 0.96% H5S_set_version 141ms 0.95% 77.95% 141ms 0.95% std::isinf (inline) 124ms 0.83% 78.78% 135ms 0.91% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 55ms 0.37% 79.15% 133ms 0.89% _int_free 59ms 0.4% 79.55% 127ms 0.85% H5VM_array_calc 1ms 0.0067% 79.56% 119ms 0.8% VecDuplicate 3ms 0.02% 79.58% 118ms 0.79% VecDuplicate_MPI 0 0% 79.58% 108ms 0.73% PMPI_File_set_view 106ms 0.71% 80.29% 106ms 0.71% TimeStepper::CalculateNextTime 50ms 0.34% 80.63% 106ms 0.71% std::__cxx11::basic_string::basic_string 1ms 0.0067% 80.63% 102ms 0.69% VecNorm 52ms 0.35% 80.98% 101ms 0.68% H5S_hyper_add_span_element 101ms 0.68% 81.66% 101ms 0.68% H5VM_array_offset_pre 90ms 0.61% 82.27% 96ms 0.65% AbstractParameterisedSystem::SetAnyVariable 2ms 0.013% 82.28% 96ms 0.65% VecNorm_Seq 1ms 0.0067% 82.29% 90ms 0.61% VecTDot 27ms 0.18% 82.47% 89ms 0.6% __libc_calloc 0 0% 82.47% 87ms 0.59% VecTDot_Seq 0 0% 82.47% 87ms 0.59% VecXDot_Seq_Private.constprop.0 3ms 0.02% 82.49% 86ms 0.58% PMPI_Type_create_resized 86ms 0.58% 83.07% 86ms 0.58% std::vector::operator[] (inline) 4ms 0.027% 83.10% 85ms 0.57% opal_datatype_create_desc 0 0% 83.10% 84ms 0.57% VecCreate 1ms 0.0067% 83.10% 84ms 0.57% ompi_datatype_duplicate 83ms 0.56% 83.66% 83ms 0.56% [libm.so.6] 39ms 0.26% 83.92% 81ms 0.55% H5S_select_iter_next 81ms 0.55% 84.47% 81ms 0.55% H5VM_chunk_index_scaled 81ms 0.55% 85.01% 81ms 0.55% asuint64 (inline) 80ms 0.54% 85.55% 80ms 0.54% __memcpy_avx_unaligned_erms 0 0% 85.55% 76ms 0.51% MPI_Type_contiguous 43ms 0.29% 85.84% 76ms 0.51% TimeStepper::AdvanceOneTimeStep 54ms 0.36% 86.21% 75ms 0.5% AbstractParameterisedSystem::GetAnyVariable 12ms 0.081% 86.29% 75ms 0.5% opal_dss_print_buffer_contents