File: Test2dVertexBasedSimulationWithFreeBoundary Type: cpu Showing nodes accounting for 63799ms, 83.08% of 76793ms total Dropped 1223 nodes (cum <= 383.96ms) flat flat% sum% cum cum% 0 0% 0% 73426ms 95.62% __libc_start_call_main 0 0% 0% 73426ms 95.62% __libc_start_main_impl 0 0% 0% 73426ms 95.62% _start 0 0% 0% 73410ms 95.59% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 73410ms 95.59% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 73410ms 95.59% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 73410ms 95.59% main 0 0% 0% 73371ms 95.54% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 73371ms 95.54% CxxTest::TestRunner::runTest (inline) 0 0% 0% 73371ms 95.54% Test2DVertexSimulationWithFreeBoundary::Test2DFreeBoundaryVertexSimulationForProfiling 1ms 0.0013% 0.0013% 71597ms 93.23% AbstractCellBasedSimulation::Solve 3ms 0.0039% 0.0052% 33594ms 43.75% AbstractCellPopulation::WriteResultsToFiles 0 0% 0.0052% 25457ms 33.15% VertexBasedCellPopulation::WriteVtkResultsToFile 18ms 0.023% 0.029% 25003ms 32.56% VertexBasedCellPopulation::WriteCellVtkResultsToFile 0 0% 0.029% 22019ms 28.67% VertexMeshWriter::WriteVtkUsingMesh 5ms 0.0065% 0.035% 21736ms 28.30% OffLatticeSimulation::UpdateCellLocationsAndTopology 5ms 0.0065% 0.042% 20939ms 27.27% ForwardEulerNumericalMethod::UpdateAllNodePositions 32ms 0.042% 0.083% 20534ms 26.74% AbstractNumericalMethod::ComputeForcesIncludingDamping 18ms 0.023% 0.11% 16996ms 22.13% VertexMeshWriter::MakeVtkMesh 174ms 0.23% 0.33% 15399ms 20.05% FarhadifarForce::AddForceContribution 0 0% 0.33% 15085ms 19.64% AbstractCellBasedSimulation::UpdateCellPopulation 0 0% 0.33% 13977ms 18.20% VertexBasedCellPopulation::Update 1ms 0.0013% 0.33% 13905ms 18.11% MutableVertexMesh::ReMesh 5ms 0.0065% 0.34% 11974ms 15.59% vtkPolygon::New 10ms 0.013% 0.35% 11963ms 15.58% vtkPolygon::vtkPolygon 67ms 0.087% 0.44% 8434ms 10.98% vtkCell::vtkCell 991ms 1.29% 1.73% 7809ms 10.17% operator new 236ms 0.31% 2.04% 7721ms 10.05% MutableVertexMesh::CheckForIntersections 26ms 0.034% 2.07% 7320ms 9.53% vtkPoints::New 313ms 0.41% 2.48% 7019ms 9.14% boost::numeric::ublas::c_vector::c_vector (partial-inline) 97ms 0.13% 2.61% 6936ms 9.03% vtkPoints::vtkPoints 2182ms 2.84% 5.45% 6876ms 8.95% __GI___libc_malloc 158ms 0.21% 5.65% 6251ms 8.14% FarhadifarForce::GetLineTensionParameter 113ms 0.15% 5.80% 6221ms 8.10% CellPropertyCollection::GetPropertiesType (inline) 178ms 0.23% 6.03% 6099ms 7.94% boost::numeric::ublas::vector_assign (inline) 2227ms 2.90% 8.93% 5783ms 7.53% __GI___libc_free 362ms 0.47% 9.40% 5635ms 7.34% VertexMesh::GetVectorFromAtoB 9ms 0.012% 9.42% 5434ms 7.08% vtkQuad::New 35ms 0.046% 9.46% 5406ms 7.04% vtkQuad::vtkQuad 14ms 0.018% 9.48% 5338ms 6.95% vtkTriangle::New 6ms 0.0078% 9.49% 5303ms 6.91% vtkLine::New 61ms 0.079% 9.57% 5263ms 6.85% vtkTriangle::vtkTriangle 1022ms 1.33% 10.90% 5174ms 6.74% std::__new_allocator::allocate (inline) 96ms 0.13% 11.02% 5168ms 6.73% vtkLine::vtkLine 0 0% 11.02% 5002ms 6.51% std::allocator_traits::allocate (inline) 25ms 0.033% 11.06% 4982ms 6.49% AbstractCellProperty::IsSubType (inline) 1244ms 1.62% 12.68% 4956ms 6.45% __dynamic_cast 24ms 0.031% 12.71% 4900ms 6.38% VertexBasedCellPopulation::GetDampingConstant 1498ms 1.95% 14.66% 4895ms 6.37% boost::numeric::ublas::indexing_vector_assign 0 0% 14.66% 4851ms 6.32% vtkXMLWriterBase::Write 1ms 0.0013% 14.66% 4849ms 6.31% vtkStreamingDemandDrivenPipeline::Update 0 0% 14.66% 4816ms 6.27% vtkDemandDrivenPipeline::ProcessRequest 2ms 0.0026% 14.66% 4801ms 6.25% vtkStreamingDemandDrivenPipeline::ProcessRequest 0 0% 14.66% 4794ms 6.24% vtkExecutive::CallAlgorithm 0 0% 14.66% 4778ms 6.22% vtkDemandDrivenPipeline::ExecuteData 2ms 0.0026% 14.66% 4771ms 6.21% vtkXMLUnstructuredDataWriter::ProcessRequest 0 0% 14.66% 4769ms 6.21% vtkCompositeDataPipeline::ExecuteData 246ms 0.32% 14.98% 4627ms 6.03% vtkPoints::SetDataType 0 0% 14.98% 4514ms 5.88% std::_Rb_tree::_M_create_node (inline) 780ms 1.02% 16.00% 4235ms 5.51% std::_Rb_tree::_M_erase 10ms 0.013% 16.01% 4223ms 5.50% MutableVertexMesh::RemoveDeletedNodesAndElements 0 0% 16.01% 4125ms 5.37% std::_Rb_tree::_M_get_node (inline) 16ms 0.021% 16.03% 4112ms 5.35% vtkPolygon::~vtkPolygon 0 0% 16.03% 3936ms 5.13% std::_Rb_tree::_Alloc_node::operator() (inline) 662ms 0.86% 16.90% 3905ms 5.09% VertexMesh::ElementIncludesPoint 0 0% 16.90% 3869ms 5.04% vtkXMLUnstructuredDataWriter::WriteAPiece 1ms 0.0013% 16.90% 3869ms 5.04% vtkXMLUnstructuredGridWriter::WriteAppendedPieceData 113ms 0.15% 17.04% 3716ms 4.84% std::__new_allocator::deallocate (inline) 0 0% 17.04% 3703ms 4.82% std::allocator_traits::deallocate (inline) 145ms 0.19% 17.23% 3620ms 4.71% std::_Rb_tree::~_Rb_tree (inline) 0 0% 17.23% 3599ms 4.69% std::_Rb_tree::_M_drop_node (inline) 310ms 0.4% 17.64% 3588ms 4.67% std::ostream::_M_insert 88ms 0.11% 17.75% 3570ms 4.65% std::_Rb_tree::_Rb_tree (partial-inline) 2ms 0.0026% 17.75% 3550ms 4.62% std::ostream::operator<< (inline) 3088ms 4.02% 21.78% 3537ms 4.61% _int_free 2209ms 2.88% 24.65% 3514ms 4.58% _int_malloc 0 0% 24.65% 3484ms 4.54% std::set::~set (inline) 5ms 0.0065% 24.66% 3448ms 4.49% tbb::detail::r1::parallel_pipeline 0 0% 24.66% 3442ms 4.48% std::_Rb_tree::_M_put_node (inline) 33ms 0.043% 24.70% 3401ms 4.43% Cell::GetMutationState 284ms 0.37% 25.07% 3331ms 4.34% std::_Rb_tree::_M_copy (inline) 0 0% 25.07% 3329ms 4.34% clone3 0 0% 25.07% 3329ms 4.34% start_thread 7ms 0.0091% 25.08% 3321ms 4.32% std::set::set (inline) 2ms 0.0026% 25.08% 3298ms 4.29% tbb::detail::r1::reset 1347ms 1.75% 26.84% 3262ms 4.25% tbb::detail::r1::wait_bounded_queue_monitor 94ms 0.12% 26.96% 3182ms 4.14% vtkCell::~vtkCell 348ms 0.45% 27.41% 3117ms 4.06% AbstractMesh::GetVectorFromAtoB 3ms 0.0039% 27.42% 3106ms 4.04% vtkXMLWriter::WriteBinaryData 3ms 0.0039% 27.42% 3062ms 3.99% vtkXMLWriter::WriteBinaryDataInternal 2ms 0.0026% 27.42% 3053ms 3.98% vtkXMLWriter::WriteBinaryDataBlock 14ms 0.018% 27.44% 3025ms 3.94% NodeLocationWriter::VisitAnyPopulation 244ms 0.32% 27.76% 3002ms 3.91% std::map::operator[] (partial-inline) 2989ms 3.89% 31.65% 2989ms 3.89% __strcmp_avx2 65ms 0.085% 31.74% 2971ms 3.87% vtkBase64OutputStream::Write 406ms 0.53% 32.26% 2942ms 3.83% std::_Rb_tree::_M_clone_node (inline) 225ms 0.29% 32.56% 2904ms 3.78% vtkBase64OutputStream::EncodeTriplet 146ms 0.19% 32.75% 2843ms 3.70% VertexMesh::GetNextEdgeGradientOfElementAtNode 19ms 0.025% 32.77% 2808ms 3.66% MutableVertexMesh::RemoveDeletedNodes 394ms 0.51% 33.29% 2681ms 3.49% vtkAOSDataArrayTemplate::vtkAOSDataArrayTemplate 12ms 0.016% 33.30% 2676ms 3.48% EdgeHelper::RemoveDeletedEdges 121ms 0.16% 33.46% 2652ms 3.45% MutableElement::ResetIndex 0 0% 33.46% 2601ms 3.39% vtkXMLUnstructuredDataWriter::WriteAppendedPieceData 172ms 0.22% 33.68% 2587ms 3.37% std::num_put::_M_insert_float 1239ms 1.61% 35.30% 2563ms 3.34% __cxxabiv1::__si_class_type_info::__do_dyncast 11ms 0.014% 35.31% 2456ms 3.20% EdgeHelper::UpdateEdgesMapKey 789ms 1.03% 36.34% 2435ms 3.17% std::ostream::write 128ms 0.17% 36.50% 2345ms 3.05% boost::numeric::ublas::c_vector::operator= (inline) 2318ms 3.02% 39.52% 2318ms 3.02% __memcpy_avx_unaligned_erms 8ms 0.01% 39.53% 2307ms 3.00% AbstractCellPopulation::AcceptCellWritersAcrossPopulation 0 0% 39.53% 2255ms 2.94% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 39.53% 2255ms 2.94% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 79ms 0.1% 39.64% 2254ms 2.94% AbstractCellPopulation::GetCellUsingLocationIndex 953ms 1.24% 40.88% 2234ms 2.91% std::_Rb_tree::_M_lower_bound (inline) 551ms 0.72% 41.59% 2132ms 2.78% AbstractMesh::GetDistanceBetweenNodes 2094ms 2.73% 44.32% 2094ms 2.73% boost::numeric::ublas::same_impl_ex 82ms 0.11% 44.43% 2085ms 2.72% std::__copy_move::__copy_m (inline) 0 0% 44.43% 2085ms 2.72% std::__copy_move_a (inline) 0 0% 44.43% 2085ms 2.72% std::__copy_move_a1 (inline) 0 0% 44.43% 2085ms 2.72% std::__copy_move_a2 (inline) 0 0% 44.43% 2085ms 2.72% std::copy (inline) 79ms 0.1% 44.53% 2069ms 2.69% vtkPoints::~vtkPoints 49ms 0.064% 44.60% 2065ms 2.69% std::__cxx11::collate::do_transform 2018ms 2.63% 47.22% 2018ms 2.63% boost::numeric::ublas::c_vector::operator() 0 0% 47.22% 2013ms 2.62% std::set::insert (inline) 20ms 0.026% 47.25% 1970ms 2.57% Cell::GetCellProliferativeType 19ms 0.025% 47.27% 1946ms 2.53% ___vsnprintf 10ms 0.013% 47.29% 1931ms 2.51% std::_Rb_tree::erase 0 0% 47.29% 1927ms 2.51% __vsnprintf_internal (inline) 210ms 0.27% 47.56% 1905ms 2.48% __printf_buffer 1889ms 2.46% 50.02% 1889ms 2.46% __GI_sched_yield 21ms 0.027% 50.05% 1872ms 2.44% vtkTriangle::~vtkTriangle 14ms 0.018% 50.07% 1868ms 2.43% VertexBasedCellPopulation::AcceptCellWriter 0 0% 50.07% 1841ms 2.40% boost::numeric::ublas::norm_2 (inline) 0 0% 50.07% 1826ms 2.38% std::_Rb_tree::lower_bound (inline) 0 0% 50.07% 1826ms 2.38% std::map::lower_bound (inline) 80ms 0.1% 50.17% 1820ms 2.37% vtkIdList::AllocateInternal 1480ms 1.93% 52.10% 1811ms 2.36% boost::numeric::ublas::vector_norm_2::apply (partial-inline) 23ms 0.03% 52.13% 1787ms 2.33% std::set_intersection (inline) 11ms 0.014% 52.14% 1783ms 2.32% CellPopulationElementWriter::Visit 0 0% 52.14% 1769ms 2.30% VoronoiVertexMeshGenerator::GenerateVoronoiMesh 0 0% 52.14% 1769ms 2.30% VoronoiVertexMeshGenerator::VoronoiVertexMeshGenerator 94ms 0.12% 52.26% 1764ms 2.30% std::__set_intersection 894ms 1.16% 53.43% 1762ms 2.29% VoronoiVertexMeshGenerator::CreateVoronoiTessellation 20ms 0.026% 53.45% 1756ms 2.29% vtkQuad::~vtkQuad 148ms 0.19% 53.65% 1742ms 2.27% std::_Rb_tree::_M_insert_ (inline) 12ms 0.016% 53.66% 1704ms 2.22% vtkLine::GetParametricCenter 27ms 0.035% 53.70% 1617ms 2.11% vtkDataArray::CreateDataArray 25ms 0.033% 53.73% 1603ms 2.09% vtkTypeFloat64Array::~vtkTypeFloat64Array 5ms 0.0065% 53.74% 1590ms 2.07% __printf_fp_spec (inline) 63ms 0.082% 53.82% 1585ms 2.06% __printf_fp_l_buffer 39ms 0.051% 53.87% 1526ms 1.99% vtkFloatArray::New 37ms 0.048% 53.92% 1502ms 1.96% vtkTypeFloat64Array::New 35ms 0.046% 53.96% 1464ms 1.91% vtkDoubleArray::vtkDoubleArray 672ms 0.88% 54.84% 1457ms 1.90% std::basic_filebuf::xsputn 630ms 0.82% 55.66% 1446ms 1.88% __printf_fp_buffer_1 13ms 0.017% 55.68% 1431ms 1.86% Cell::GetCellData 839ms 1.09% 56.77% 1429ms 1.86% std::_Rb_tree::equal_range (inline) 147ms 0.19% 56.96% 1416ms 1.84% boost::numeric::ublas::vector_binary::size (inline) 1398ms 1.82% 58.78% 1398ms 1.82% std::_Rb_tree::_S_right (inline) 148ms 0.19% 58.97% 1380ms 1.80% std::vector::_M_default_append (partial-inline) 45ms 0.059% 59.03% 1332ms 1.73% vtkFloatArray::~vtkFloatArray 4ms 0.0052% 59.04% 1332ms 1.73% vtkXMLWriter::WriteCellDataAppendedData 0 0% 59.04% 1313ms 1.71% boost::numeric::ublas::c_vector::assign (inline) 0 0% 59.04% 1280ms 1.67% std::insert_iterator::operator= (inline) 25ms 0.033% 59.07% 1274ms 1.66% vtkTypeFloat64Array::vtkTypeFloat64Array 23ms 0.03% 59.10% 1261ms 1.64% vtkFloatArray::vtkFloatArray 2ms 0.0026% 59.10% 1259ms 1.64% vtkXMLWriter::WritePointsAppendedData 7ms 0.0091% 59.11% 1254ms 1.63% LegacyCellProliferativeTypesWriter::VisitCell 1ms 0.0013% 59.11% 1244ms 1.62% vtkXMLUnstructuredDataWriter::WriteCellsAppendedDataWorker 265ms 0.35% 59.46% 1236ms 1.61% vtkObject::vtkObject 14ms 0.018% 59.48% 1200ms 1.56% LegacyCellProliferativeTypesWriter::GetCellDataForVtkOutput 33ms 0.043% 59.52% 1186ms 1.54% AbstractCellProperty::IsType (inline) 199ms 0.26% 59.78% 1184ms 1.54% std::_Rb_tree_const_iterator::operator++ (inline) 27ms 0.035% 59.81% 1158ms 1.51% CellPropertyCollection::HasProperty 15ms 0.02% 59.83% 1148ms 1.49% AbstractTargetAreaModifier::UpdateTargetAreas 0 0% 59.83% 1146ms 1.49% Cell::HasCellProperty (inline) 1ms 0.0013% 59.83% 1135ms 1.48% std::_Rb_tree::_M_insert_unique_ (inline) 6ms 0.0078% 59.84% 1126ms 1.47% TargetAreaLinearGrowthModifier::UpdateTargetAreaOfCell 5ms 0.0065% 59.85% 1118ms 1.46% AbstractCellPopulation::Iterator::operator++ (inline) 51ms 0.066% 59.91% 1116ms 1.45% AbstractCellPopulation::Iterator::IsRealCell (inline) 0 0% 59.91% 1055ms 1.37% tcache_get (inline) 1055ms 1.37% 61.29% 1055ms 1.37% tcache_get_n (inline) 472ms 0.61% 61.90% 997ms 1.30% vtkTypeFloat64Array::PrintSelf 0 0% 61.90% 987ms 1.29% boost::numeric::ublas::c_vector::operator-= (inline) 2ms 0.0026% 61.91% 986ms 1.28% vtkIdList::Allocate 12ms 0.016% 61.92% 960ms 1.25% VertexBasedCellPopulation::IsCellAssociatedWithADeletedLocation 19ms 0.025% 61.95% 935ms 1.22% Node::RemoveElement 219ms 0.29% 62.23% 933ms 1.21% AbstractElement::GetNodeLocation 10ms 0.013% 62.24% 923ms 1.20% std::_Rb_tree::_M_emplace_hint_unique 10ms 0.013% 62.26% 922ms 1.20% std::set::erase (inline) 127ms 0.17% 62.42% 921ms 1.20% vtkAOSDataArrayTemplate::DataElementChanged 910ms 1.19% 63.61% 910ms 1.19% std::_Rb_tree_increment 0 0% 63.61% 878ms 1.14% std::_Rb_tree::_M_insert_unique (inline) 166ms 0.22% 63.82% 862ms 1.12% AbstractCellProperty::IsSame 241ms 0.31% 64.14% 860ms 1.12% vtkObject::Modified 532ms 0.69% 64.83% 845ms 1.10% vtkObjectBase::UnRegisterInternal 0 0% 64.83% 841ms 1.10% boost::numeric::ublas::scalar_traits::type_sqrt (inline) 157ms 0.2% 65.03% 805ms 1.05% VertexMesh::GetAreaGradientOfElementAtNode 167ms 0.22% 65.25% 763ms 0.99% boost::numeric::ublas::c_vector::operator[] (inline) 0 0% 65.25% 762ms 0.99% std::_Rb_tree::clear (inline) 44ms 0.057% 65.31% 760ms 0.99% boost::numeric::ublas::vector_reference::operator() (inline) 286ms 0.37% 65.68% 755ms 0.98% std::__ostream_insert 58ms 0.076% 65.76% 753ms 0.98% vtkDoubleArray::~vtkDoubleArray 518ms 0.67% 66.43% 745ms 0.97% std::basic_streambuf::xsputn 0 0% 66.43% 744ms 0.97% std::map::clear (inline) 57ms 0.074% 66.51% 735ms 0.96% VertexMesh::GetVolumeOfElement 657ms 0.86% 67.36% 723ms 0.94% malloc_consolidate 0 0% 67.36% 719ms 0.94% std::_Vector_base::_M_allocate (inline) 0 0% 67.36% 714ms 0.93% boost::numeric::ublas::vector_binary::operator() (inline) 4ms 0.0052% 67.37% 712ms 0.93% AbstractCellBasedSimulation::DoCellBirth 701ms 0.91% 68.28% 701ms 0.91% Node::GetIndex 701ms 0.91% 69.19% 701ms 0.91% Node::rGetLocation 269ms 0.35% 69.54% 696ms 0.91% boost::detail::shared_count::~shared_count (inline) 0 0% 69.54% 696ms 0.91% boost::shared_ptr::~shared_ptr (inline) 165ms 0.21% 69.76% 696ms 0.91% std::type_info::operator== (inline) 24ms 0.031% 69.79% 694ms 0.9% MutableVertexMesh::CheckForSwapsFromShortEdges 33ms 0.043% 69.83% 664ms 0.86% VertexBasedCellPopulation::GetElementCorrespondingToCell (inline) 71ms 0.092% 69.92% 636ms 0.83% vtkDataArray::vtkDataArray 11ms 0.014% 69.94% 628ms 0.82% AbstractCellPopulation::GetLocationIndexUsingCell 257ms 0.33% 70.27% 619ms 0.81% hack_digit 601ms 0.78% 71.06% 601ms 0.78% AbstractElement::IsDeleted 21ms 0.027% 71.08% 598ms 0.78% std::operator<< (partial-inline) 591ms 0.77% 71.85% 591ms 0.77% tcache_put (inline) 591ms 0.77% 72.62% 591ms 0.77% vtkTimeStamp::Modified 0 0% 72.62% 578ms 0.75% std::_Rb_tree::_Auto_node::_Auto_node (inline) 3ms 0.0039% 72.63% 556ms 0.72% vtkDataArray::ComputeRange 115ms 0.15% 72.78% 548ms 0.71% vtkAbstractArray::vtkAbstractArray 113ms 0.15% 72.92% 547ms 0.71% std::num_put::_M_insert_int 546ms 0.71% 73.63% 546ms 0.71% [libchaste_cell_based.so] 52ms 0.068% 73.70% 544ms 0.71% vtkIdList::New 55ms 0.072% 73.77% 542ms 0.71% std::_Rb_tree::_M_upper_bound (inline) 537ms 0.7% 74.47% 537ms 0.7% [libchaste_mesh.so] 534ms 0.7% 75.17% 534ms 0.7% Node::IsDeleted 1ms 0.0013% 75.17% 531ms 0.69% std::__basic_file::xsputn_2 527ms 0.69% 75.86% 529ms 0.69% __GI___writev 3ms 0.0039% 75.86% 515ms 0.67% CellProliferativeTypesWriter::VisitCell 14ms 0.018% 75.88% 515ms 0.67% VertexMesh::GetSurfaceAreaOfElement 5ms 0.0065% 75.88% 513ms 0.67% boost::numeric::ublas::detail::expression_type_check (inline) 34ms 0.044% 75.93% 508ms 0.66% boost::numeric::ublas::detail::equals 5ms 0.0065% 75.94% 500ms 0.65% AbstractMesh::NodeIterator::operator++ (inline) 499ms 0.65% 76.59% 499ms 0.65% [libvtkCommonCore-9.3.so.9.3] 26ms 0.034% 76.62% 496ms 0.65% AbstractMesh::NodeIterator::IsAllowedNode (inline) 319ms 0.42% 77.03% 496ms 0.65% std::_Hashtable::clear 495ms 0.64% 77.68% 495ms 0.64% std::vector::size (inline) 31ms 0.04% 77.72% 494ms 0.64% std::_Rb_tree::_M_erase_aux (inline) 56ms 0.073% 77.79% 475ms 0.62% CellPropertyCollection::AddProperty 24ms 0.031% 77.82% 467ms 0.61% std::less::operator() (inline) 460ms 0.6% 78.42% 464ms 0.6% vtkObjectBase::Delete 460ms 0.6% 79.02% 460ms 0.6% std::ostream::sentry::sentry 1ms 0.0013% 79.02% 459ms 0.6% std::basic_filebuf::open 61ms 0.079% 79.10% 452ms 0.59% tbb::detail::r1::cancel_group_execution 36ms 0.047% 79.15% 448ms 0.58% std::_Rb_tree::find (inline) 3ms 0.0039% 79.15% 448ms 0.58% vtk::detail::smp::vtkSMPToolsImplForTBB 362ms 0.47% 79.62% 443ms 0.58% std::operator< (inline) 0 0% 79.62% 441ms 0.57% AbstractCellPopulation::OpenRoundRobinWritersFilesForAppend 2ms 0.0026% 79.63% 440ms 0.57% AbstractCellBasedWriter::OpenOutputFileForAppend 86ms 0.11% 79.74% 440ms 0.57% vtkSOADataArrayTemplate::FillTypedComponent 2ms 0.0026% 79.74% 439ms 0.57% std::basic_filebuf::overflow 4ms 0.0052% 79.75% 437ms 0.57% std::basic_filebuf::_M_convert_to_external 88ms 0.11% 79.86% 436ms 0.57% std::__new_allocator::construct (inline) 0 0% 79.86% 436ms 0.57% std::allocator_traits::construct (inline) 3ms 0.0039% 79.87% 433ms 0.56% std::__basic_file::xsputn 423ms 0.55% 80.42% 429ms 0.56% __GI___libc_write 1ms 0.0013% 80.42% 427ms 0.56% OutputFileHandler::OpenOutputFile 11ms 0.014% 80.43% 423ms 0.55% CellProliferativeTypesWriter::GetCellDataForVtkOutput 59ms 0.077% 80.51% 421ms 0.55% vtkDataArray::~vtkDataArray 414ms 0.54% 81.05% 420ms 0.55% vtkObject::~vtkObject 413ms 0.54% 81.59% 417ms 0.54% boost::detail::sp_counted_base::release 100ms 0.13% 81.72% 416ms 0.54% Edge::GetMapIndex 0 0% 81.72% 414ms 0.54% boost::numeric::ublas::norm_inf (inline) 121ms 0.16% 81.87% 414ms 0.54% boost::numeric::ublas::vector_norm_inf::apply (inline) 66ms 0.086% 81.96% 403ms 0.52% MutableElement::GetNodeLocalIndex 398ms 0.52% 82.48% 398ms 0.52% std::_Rb_tree_insert_and_rebalance 4ms 0.0052% 82.48% 396ms 0.52% vtkDataArrayPrivate::DoComputeScalarRange 1ms 0.0013% 82.48% 391ms 0.51% AbstractCellBasedSimulation::DoCellRemoval (inline) 73ms 0.095% 82.58% 390ms 0.51% vtkIdList::~vtkIdList 0 0% 82.58% 389ms 0.51% std::_Rb_tree::_M_construct_node (inline) 384ms 0.5% 83.08% 384ms 0.5% [libstdc++.so.6.0.33]