File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12931ms, 85.72% of 15086ms total Dropped 765 nodes (cum <= 75.43ms) flat flat% sum% cum cum% 0 0% 0% 15076ms 99.93% __libc_start_call_main 0 0% 0% 15076ms 99.93% __libc_start_main_impl 0 0% 0% 15076ms 99.93% _start 0 0% 0% 15072ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 15072ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 15072ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 15072ms 99.91% main 0 0% 0% 15023ms 99.58% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 15023ms 99.58% CxxTest::TestRunner::runTest (inline) 0 0% 0% 15023ms 99.58% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14997ms 99.41% AbstractCardiacProblem::Solve 1ms 0.0066% 0.027% 11375ms 75.40% AbstractDynamicLinearPdeSolver::Solve 31ms 0.21% 0.23% 9283ms 61.53% AbstractCardiacTissue::SolveCellSystems 146ms 0.97% 1.20% 5748ms 38.10% AbstractCardiacCell::ComputeExceptVoltage 194ms 1.29% 2.49% 4950ms 32.81% AbstractOneStepIvpOdeSolver::InternalSolve 172ms 1.14% 3.63% 4176ms 27.68% EulerIvpOdeSolver::CalculateNextYValue 884ms 5.86% 9.49% 3947ms 26.16% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1780ms 11.80% 21.28% 3643ms 24.15% __GI___exp 3ms 0.02% 21.30% 3546ms 23.51% MonodomainProblem::WriteOneStep 1ms 0.0066% 21.31% 3362ms 22.29% Hdf5DataWriter::PutVector 1ms 0.0066% 21.32% 3347ms 22.19% H5Dwrite 2ms 0.013% 21.33% 3311ms 21.95% H5D__write 89ms 0.59% 21.92% 2723ms 18.05% AbstractCardiacTissue::UpdateCaches (inline) 870ms 5.77% 27.69% 2593ms 17.19% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.69% 1827ms 12.11% H5D__chunk_collective_write 19ms 0.13% 27.81% 1827ms 12.11% H5F_set_coll_metadata_reads 1629ms 10.80% 38.61% 1778ms 11.79% __ieee754_exp_fma 17ms 0.11% 38.72% 1610ms 10.67% H5FD_s3comms_uriencode 1ms 0.0066% 38.73% 1401ms 9.29% LinearSystem::Solve 5ms 0.033% 38.76% 1356ms 8.99% H5D__chunk_cacheable 0 0% 38.76% 1263ms 8.37% KSPSolve 5ms 0.033% 38.80% 1263ms 8.37% KSPSolve_Private 4ms 0.027% 38.82% 1246ms 8.26% KSPSolve_CG 2ms 0.013% 38.84% 1209ms 8.01% H5F_block_write 57ms 0.38% 39.22% 1208ms 8.01% 1ms 0.0066% 39.22% 1207ms 8.00% H5FD_write 0 0% 39.22% 1207ms 8.00% H5F__accum_write 0 0% 39.22% 1207ms 8.00% H5PB_write 459ms 3.04% 42.26% 1174ms 7.78% H5S_select_iterate 3ms 0.02% 42.28% 1111ms 7.36% H5D__mpio_select_write 0 0% 42.28% 967ms 6.41% PMPI_File_write_at_all 941ms 6.24% 48.52% 942ms 6.24% __GI_pwritev64 6ms 0.04% 48.56% 895ms 5.93% std::pow (inline) 85ms 0.56% 49.13% 889ms 5.89% __pow 117ms 0.78% 49.90% 802ms 5.32% __ieee754_pow_fma 58ms 0.38% 50.29% 730ms 4.84% H5D__chunk_set_sizes 283ms 1.88% 52.16% 665ms 4.41% MonodomainSolver::SetupLinearSystem 0 0% 52.16% 653ms 4.33% PCApply 1ms 0.0066% 52.17% 651ms 4.32% PCApply_BJacobi_Singleblock 2ms 0.013% 52.18% 628ms 4.16% KSPSolve_PREONLY 7ms 0.046% 52.23% 626ms 4.15% MatSolve 0 0% 52.23% 626ms 4.15% PCApply_ICC 299ms 1.98% 54.21% 622ms 4.12% CellLuoRudy1991FromCellML::VerifyStateVariables 608ms 4.03% 58.24% 619ms 4.10% MatSolve_SeqSBAIJ_1_NaturalOrdering 65ms 0.43% 58.67% 496ms 3.29% H5S_mpio_space_type 3ms 0.02% 58.69% 493ms 3.27% MatMult 489ms 3.24% 61.93% 490ms 3.25% MatMult_SeqAIJ 2ms 0.013% 61.94% 447ms 2.96% KSP_PCApply.lto_priv.7 366ms 2.43% 64.37% 366ms 2.43% log_inline (inline) 4ms 0.027% 64.40% 293ms 1.94% KSPConvergedDefault 282ms 1.87% 66.27% 284ms 1.88% exp_inline (inline) 29ms 0.19% 66.46% 254ms 1.68% H5VM_chunk_index 119ms 0.79% 67.25% 246ms 1.63% TimeStepper::TimeStepper 178ms 1.18% 68.43% 219ms 1.45% _int_malloc 49ms 0.32% 68.75% 212ms 1.41% __GI___libc_malloc 0 0% 68.75% 208ms 1.38% KSP_PCApply 194ms 1.29% 70.04% 194ms 1.29% [libchaste_heart.so] 32ms 0.21% 70.25% 185ms 1.23% __GI___libc_free 11ms 0.073% 70.32% 185ms 1.23% ompi_datatype_destroy 0 0% 70.32% 181ms 1.20% Hdf5DataWriter::PutUnlimitedVariable 107ms 0.71% 71.03% 181ms 1.20% top12 (inline) 86ms 0.57% 71.60% 179ms 1.19% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 7ms 0.046% 71.65% 179ms 1.19% MPI_Type_free 151ms 1.00% 72.65% 175ms 1.16% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 9ms 0.06% 72.71% 170ms 1.13% ompi_datatype_create 162ms 1.07% 73.78% 162ms 1.07% ddot_ 39ms 0.26% 74.04% 160ms 1.06% AbstractCardiacCell::SetVoltage (partial-inline) 129ms 0.86% 74.90% 160ms 1.06% AbstractOneStepIvpOdeSolver::Solve 156ms 1.03% 75.93% 156ms 1.03% std::isinf (inline) 0 0% 75.93% 155ms 1.03% PMPI_File_set_view 9ms 0.06% 75.99% 152ms 1.01% ompi_info_register_framework_params 61ms 0.4% 76.40% 151ms 1.00% _int_free 36ms 0.24% 76.63% 150ms 0.99% ompi_datatype_release_args 29ms 0.19% 76.83% 141ms 0.93% H5S_set_version 65ms 0.43% 77.26% 138ms 0.91% H5S_hyper_add_span_element 131ms 0.87% 78.13% 131ms 0.87% H5VM_chunk_index_scaled 130ms 0.86% 78.99% 130ms 0.86% TimeStepper::CalculateNextTime 115ms 0.76% 79.75% 115ms 0.76% __memcpy_avx_unaligned_erms 1ms 0.0066% 79.76% 114ms 0.76% VecDuplicate 3ms 0.02% 79.78% 113ms 0.75% VecDuplicate_MPI 47ms 0.31% 80.09% 112ms 0.74% H5VM_array_calc 111ms 0.74% 80.82% 111ms 0.74% __ieee754_log_fma 2ms 0.013% 80.84% 108ms 0.72% PMPI_Type_create_resized 5ms 0.033% 80.87% 108ms 0.72% VecNorm 3ms 0.02% 80.89% 108ms 0.72% ompi_datatype_duplicate 91ms 0.6% 81.49% 104ms 0.69% AbstractParameterisedSystem::SetAnyVariable 2ms 0.013% 81.51% 99ms 0.66% VecTDot 78ms 0.52% 82.02% 97ms 0.64% AbstractParameterisedSystem::GetAnyVariable 96ms 0.64% 82.66% 96ms 0.64% H5VM_array_offset_pre 0 0% 82.66% 96ms 0.64% VecTDot_Seq 0 0% 82.66% 96ms 0.64% VecXDot_Seq_Private.constprop.0 43ms 0.29% 82.94% 95ms 0.63% std::__cxx11::basic_string::basic_string 0 0% 82.94% 94ms 0.62% VecNorm_Seq 21ms 0.14% 83.08% 93ms 0.62% __libc_calloc 48ms 0.32% 83.40% 91ms 0.6% AbstractCardiacCell::GetVoltage (partial-inline) 4ms 0.027% 83.43% 89ms 0.59% opal_datatype_create_desc 87ms 0.58% 84.01% 87ms 0.58% [libm.so.6] 4ms 0.027% 84.03% 83ms 0.55% H5D__chunk_allocated 10ms 0.066% 84.10% 83ms 0.55% std::vector::_M_assign_aux (inline) 0 0% 84.10% 83ms 0.55% std::vector::assign (inline) 35ms 0.23% 84.33% 81ms 0.54% H5S_select_iter_next 45ms 0.3% 84.63% 80ms 0.53% H5SL_search 52ms 0.34% 84.97% 80ms 0.53% TimeStepper::AdvanceOneTimeStep 79ms 0.52% 85.50% 79ms 0.52% asuint64 (inline) 2ms 0.013% 85.51% 78ms 0.52% H5Pcreate 1ms 0.0066% 85.52% 77ms 0.51% H5D__select_write 30ms 0.2% 85.72% 77ms 0.51% ompi_datatype_set_args 0 0% 85.72% 76ms 0.5% H5Dgather