File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 6789ms, 88.11% of 7705ms total Dropped 593 nodes (cum <= 38.52ms) flat flat% sum% cum cum% 0 0% 0% 7697ms 99.90% __libc_start_call_main 0 0% 0% 7697ms 99.90% __libc_start_main_impl 0 0% 0% 7697ms 99.90% _start 0 0% 0% 7695ms 99.87% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 7695ms 99.87% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 7695ms 99.87% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 7695ms 99.87% main 0 0% 0% 7662ms 99.44% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 7662ms 99.44% CxxTest::TestRunner::runTest (inline) 0 0% 0% 7662ms 99.44% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 7649ms 99.27% AbstractCardiacProblem::Solve 0 0% 0% 5774ms 74.94% AbstractDynamicLinearPdeSolver::Solve 27ms 0.35% 0.35% 4585ms 59.51% AbstractCardiacTissue::SolveCellSystems 39ms 0.51% 0.86% 2762ms 35.85% AbstractCardiacCell::ComputeExceptVoltage 45ms 0.58% 1.44% 2393ms 31.06% AbstractOneStepIvpOdeSolver::InternalSolve 87ms 1.13% 2.57% 2088ms 27.10% EulerIvpOdeSolver::CalculateNextYValue 474ms 6.15% 8.72% 1976ms 25.65% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 8.72% 1833ms 23.79% MonodomainProblem::WriteOneStep 755ms 9.80% 18.52% 1810ms 23.49% __GI___exp 2ms 0.026% 18.55% 1778ms 23.08% H5Dwrite 1ms 0.013% 18.56% 1769ms 22.96% Hdf5DataWriter::PutVector 3ms 0.039% 18.60% 1763ms 22.88% H5D__write 20ms 0.26% 18.86% 1510ms 19.60% AbstractCardiacTissue::UpdateCaches (inline) 392ms 5.09% 23.95% 1466ms 19.03% CellLuoRudy1991FromCellML::GetIIonic 0 0% 23.95% 1079ms 14.00% H5D__chunk_collective_write 12ms 0.16% 24.10% 1079ms 14.00% H5F_set_coll_metadata_reads 4ms 0.052% 24.15% 993ms 12.89% H5FD_s3comms_uriencode 858ms 11.14% 35.29% 989ms 12.84% __ieee754_exp_fma 2ms 0.026% 35.31% 805ms 10.45% LinearSystem::Solve 21ms 0.27% 35.59% 788ms 10.23% 1ms 0.013% 35.60% 775ms 10.06% H5F_block_write 2ms 0.026% 35.63% 774ms 10.05% H5PB_write 0 0% 35.63% 772ms 10.02% H5FD_write 0 0% 35.63% 772ms 10.02% H5F__accum_write 0 0% 35.63% 753ms 9.77% KSPSolve 1ms 0.013% 35.64% 753ms 9.77% KSPSolve_Private 0 0% 35.64% 748ms 9.71% KSPSolve_CG 1ms 0.013% 35.65% 710ms 9.21% H5D__mpio_select_write 0 0% 35.65% 672ms 8.72% PMPI_File_write_at_all 656ms 8.51% 44.17% 658ms 8.54% __GI_pwritev64 3ms 0.039% 44.21% 632ms 8.20% H5D__chunk_cacheable 1ms 0.013% 44.22% 610ms 7.92% std::pow (inline) 78ms 1.01% 45.23% 609ms 7.90% __pow 166ms 2.15% 47.38% 569ms 7.38% H5S_select_iterate 58ms 0.75% 48.14% 531ms 6.89% __ieee754_pow_fma 1ms 0.013% 48.15% 415ms 5.39% PCApply 0 0% 48.15% 414ms 5.37% PCApply_BJacobi_Singleblock 47ms 0.61% 48.76% 409ms 5.31% H5D__chunk_set_sizes 0 0% 48.76% 397ms 5.15% KSPSolve_PREONLY 0 0% 48.76% 395ms 5.13% MatSolve 395ms 5.13% 53.89% 395ms 5.13% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 53.89% 395ms 5.13% PCApply_ICC 159ms 2.06% 55.95% 376ms 4.88% MonodomainSolver::SetupLinearSystem 2ms 0.026% 55.98% 342ms 4.44% MatMult 340ms 4.41% 60.39% 340ms 4.41% MatMult_SeqAIJ 45ms 0.58% 60.97% 282ms 3.66% H5S_mpio_space_type 1ms 0.013% 60.99% 272ms 3.53% KSP_PCApply.lto_priv.7 216ms 2.80% 63.79% 236ms 3.06% exp_inline (inline) 230ms 2.99% 66.77% 230ms 2.99% log_inline (inline) 108ms 1.40% 68.18% 204ms 2.65% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 68.18% 174ms 2.26% KSPConvergedDefault 12ms 0.16% 68.33% 166ms 2.15% H5VM_chunk_index 0 0% 68.33% 146ms 1.89% KSP_PCApply 60ms 0.78% 69.11% 130ms 1.69% __GI___libc_malloc 83ms 1.08% 70.19% 124ms 1.61% top12 (inline) 2ms 0.026% 70.21% 111ms 1.44% ompi_datatype_create 105ms 1.36% 71.58% 105ms 1.36% [libchaste_heart.so] 9ms 0.12% 71.69% 105ms 1.36% ompi_datatype_destroy 3ms 0.039% 71.73% 103ms 1.34% MPI_Type_free 13ms 0.17% 71.90% 103ms 1.34% __GI___libc_free 27ms 0.35% 72.25% 95ms 1.23% AbstractCardiacCell::SetVoltage (partial-inline) 52ms 0.67% 72.93% 93ms 1.21% AbstractOneStepIvpOdeSolver::Solve 56ms 0.73% 73.65% 90ms 1.17% _int_free 89ms 1.16% 74.81% 89ms 1.16% H5VM_chunk_index_scaled 66ms 0.86% 75.67% 89ms 1.16% _int_malloc 20ms 0.26% 75.92% 88ms 1.14% ompi_datatype_release_args 1ms 0.013% 75.94% 88ms 1.14% ompi_info_register_framework_params 36ms 0.47% 76.40% 82ms 1.06% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 56ms 0.73% 77.13% 81ms 1.05% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 80ms 1.04% 78.17% 80ms 1.04% __ieee754_log_fma 75ms 0.97% 79.14% 75ms 0.97% asuint64 (inline) 27ms 0.35% 79.49% 73ms 0.95% H5S_hyper_add_span_element 72ms 0.93% 80.43% 72ms 0.93% ddot_ 66ms 0.86% 81.28% 66ms 0.86% [libm.so.6] 65ms 0.84% 82.13% 65ms 0.84% H5VM_array_offset_pre 1ms 0.013% 82.14% 64ms 0.83% Hdf5DataWriter::PutUnlimitedVariable 63ms 0.82% 82.96% 63ms 0.82% __memcpy_avx512_unaligned_erms 15ms 0.19% 83.15% 62ms 0.8% H5S_set_version 36ms 0.47% 83.62% 62ms 0.8% __libc_calloc 0 0% 83.62% 60ms 0.78% std::vector::_M_assign_aux (inline) 0 0% 83.62% 60ms 0.78% std::vector::assign (inline) 21ms 0.27% 83.89% 59ms 0.77% ompi_datatype_set_args 1ms 0.013% 83.91% 57ms 0.74% PMPI_File_set_view 31ms 0.4% 84.31% 56ms 0.73% TimeStepper::AdvanceOneTimeStep 0 0% 84.31% 55ms 0.71% opal_datatype_create_desc 42ms 0.55% 84.85% 53ms 0.69% AbstractParameterisedSystem::GetAnyVariable 34ms 0.44% 85.30% 53ms 0.69% TimeStepper::TimeStepper 0 0% 85.30% 51ms 0.66% PMPI_Type_create_resized 1ms 0.013% 85.31% 51ms 0.66% ompi_datatype_duplicate 48ms 0.62% 85.93% 50ms 0.65% AbstractParameterisedSystem::SetAnyVariable 0 0% 85.93% 48ms 0.62% VecDuplicate 0 0% 85.93% 48ms 0.62% VecDuplicate_MPI 21ms 0.27% 86.20% 47ms 0.61% H5VM_array_calc 1ms 0.013% 86.22% 47ms 0.61% MPI_Type_contiguous 2ms 0.026% 86.24% 47ms 0.61% PMPI_Type_vector 0 0% 86.24% 44ms 0.57% std::__copy_move::__copy_m (inline) 0 0% 86.24% 44ms 0.57% std::__copy_move_a (inline) 0 0% 86.24% 44ms 0.57% std::__copy_move_a1 (inline) 0 0% 86.24% 44ms 0.57% std::__copy_move_a2 (inline) 0 0% 86.24% 44ms 0.57% std::copy (inline) 43ms 0.56% 86.80% 43ms 0.56% TimeStepper::GetNextTimeStep 2ms 0.026% 86.83% 42ms 0.55% H5D__chunk_allocated 18ms 0.23% 87.06% 41ms 0.53% AbstractCardiacCell::GetVoltage (partial-inline) 1ms 0.013% 87.07% 41ms 0.53% VecNorm 41ms 0.53% 87.61% 41ms 0.53% [libchaste_ode.so] 0 0% 87.61% 40ms 0.52% MPI_Type_create_hindexed 0 0% 87.61% 40ms 0.52% VecNorm_Seq 0 0% 87.61% 40ms 0.52% VecTDot 0 0% 87.61% 40ms 0.52% VecTDot_Seq 0 0% 87.61% 40ms 0.52% VecXDot_Seq_Private.constprop.0 21ms 0.27% 87.88% 40ms 0.52% std::__cxx11::basic_string::basic_string 1ms 0.013% 87.89% 39ms 0.51% H5D__select_write 17ms 0.22% 88.11% 39ms 0.51% H5S_select_iter_next