File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 336ms, 90.81% of 370ms total Dropped 129 nodes (cum <= 1.85ms) flat flat% sum% cum cum% 0 0% 0% 359ms 97.03% __libc_start_call_main 0 0% 0% 359ms 97.03% __libc_start_main_impl 0 0% 0% 359ms 97.03% _start 0 0% 0% 356ms 96.22% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 356ms 96.22% CxxTest::TestRunner::runAllTests 0 0% 0% 356ms 96.22% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 356ms 96.22% main 0 0% 0% 321ms 86.76% CxxTest::RealTestDescription::run 0 0% 0% 321ms 86.76% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 321ms 86.76% CxxTest::TestRunner::runTest (inline) 0 0% 0% 321ms 86.76% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 321ms 86.76% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 316ms 85.41% AbstractCardiacProblem::Solve 0 0% 0% 316ms 85.41% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 290ms 78.38% LinearSystem::Solve 0 0% 0% 289ms 78.11% KSPSolve 0 0% 0% 289ms 78.11% KSPSolve_CG 0 0% 0% 289ms 78.11% KSPSolve_Private 0 0% 0% 199ms 53.78% KSP_PCApply.lto_priv.7 0 0% 0% 196ms 52.97% PCApply 0 0% 0% 195ms 52.70% PCApply_BJacobi_Singleblock 1ms 0.27% 0.27% 169ms 45.68% KSPSolve_PREONLY (partial-inline) 0 0% 0.27% 156ms 42.16% MatSolve 154ms 41.62% 41.89% 156ms 42.16% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 41.89% 156ms 42.16% PCApply_ICC 0 0% 41.89% 37ms 10.00% MatMult 0 0% 41.89% 37ms 10.00% MatMult_SeqAIJ 37ms 10.00% 51.89% 37ms 10.00% MatMult_SeqAIJ_Inode (inline) 0 0% 51.89% 33ms 8.92% MatNullSpaceRemove 0 0% 51.89% 32ms 8.65% CxxTest::RealWorldDescription::setUp 0 0% 51.89% 32ms 8.65% PMPI_Init_thread 0 0% 51.89% 32ms 8.65% PetscInitialize 0 0% 51.89% 32ms 8.65% PetscSetup::setUpWorld 0 0% 51.89% 32ms 8.65% PetscSetupUtils::CommonSetup 0 0% 51.89% 32ms 8.65% PetscSetupUtils::InitialisePetsc 0 0% 51.89% 32ms 8.65% ompi_mpi_init 29ms 7.84% 59.73% 29ms 7.84% ddot_ 1ms 0.27% 60.00% 28ms 7.57% 0 0% 60.00% 21ms 5.68% AbstractCardiacTissue::SolveCellSystems 0 0% 60.00% 20ms 5.41% VecMDot 3ms 0.81% 60.81% 20ms 5.41% VecMXDot_Private 0 0% 60.81% 19ms 5.14% orte_init 0 0% 60.81% 18ms 4.86% VecTDot 0 0% 60.81% 18ms 4.86% VecTDot_Seq 0 0% 60.81% 18ms 4.86% VecXDot_Seq_Private.constprop.0 17ms 4.59% 65.41% 17ms 4.59% VecMDot_Seq 0 0% 65.41% 15ms 4.05% KSP_PCApply (partial-inline) 0 0% 65.41% 15ms 4.05% __GI__dl_catch_exception 0 0% 65.41% 15ms 4.05% _dl_catch_error 0 0% 65.41% 15ms 4.05% _dlerror_run 0 0% 65.41% 14ms 3.78% opal_stackframe_output 0 0% 65.41% 13ms 3.51% AbstractCardiacCell::ComputeExceptVoltage 1ms 0.27% 65.68% 13ms 3.51% VecMAXPY 0 0% 65.68% 13ms 3.51% ___dlopen 0 0% 65.68% 13ms 3.51% _dl_open 0 0% 65.68% 13ms 3.51% dl_open_worker 0 0% 65.68% 13ms 3.51% dlopen_doit 0 0% 65.68% 13ms 3.51% dlopen_implementation (inline) 0 0% 65.68% 13ms 3.51% hwloc_topology_load 0 0% 65.68% 13ms 3.51% mca_base_framework_open 0 0% 65.68% 12ms 3.24% AbstractOneStepIvpOdeSolver::InternalSolve 12ms 3.24% 68.92% 12ms 3.24% VecMAXPY_Seq 0 0% 68.92% 12ms 3.24% hwloc_linux_get_tid_last_cpu_location 0 0% 68.92% 12ms 3.24% mca_base_component_find 0 0% 68.92% 12ms 3.24% mca_base_component_repository_open 0 0% 68.92% 12ms 3.24% mca_base_framework_components_register 0 0% 68.92% 12ms 3.24% mca_base_framework_register 0 0% 68.92% 11ms 2.97% VecAYPX 11ms 2.97% 71.89% 11ms 2.97% VecAYPX_Seq 0 0% 71.89% 11ms 2.97% VecNorm 0 0% 71.89% 11ms 2.97% VecNorm_Seq 0 0% 71.89% 11ms 2.97% _dl_init 0 0% 71.89% 11ms 2.97% call_init (inline) 4ms 1.08% 72.97% 10ms 2.70% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 72.97% 10ms 2.70% EulerIvpOdeSolver::CalculateNextYValue 5ms 1.35% 74.32% 10ms 2.70% __GI___exp 0 0% 74.32% 10ms 2.70% _dl_lookup_symbol_x 0 0% 74.32% 9ms 2.43% VecAXPY 0 0% 74.32% 9ms 2.43% VecAXPY_Seq 9ms 2.43% 76.76% 9ms 2.43% daxpy_ 0 0% 76.76% 9ms 2.43% dl_open_worker_begin 7ms 1.89% 78.65% 9ms 2.43% do_lookup_x 1ms 0.27% 78.92% 8ms 2.16% _dl_fixup 0 0% 78.92% 8ms 2.16% _dl_runtime_resolve_xsavec 1ms 0.27% 79.19% 7ms 1.89% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 79.19% 7ms 1.89% VecDuplicate 0 0% 79.19% 7ms 1.89% VecDuplicate_Seq 7ms 1.89% 81.08% 7ms 1.89% __GI___libc_read 0 0% 81.08% 7ms 1.89% _dl_start_user 0 0% 81.08% 6ms 1.62% CellLuoRudy1991FromCellML::GetIIonic 0 0% 81.08% 6ms 1.62% mca_base_framework_components_open 0 0% 81.08% 6ms 1.62% mca_topo_base_dist_graph_neighbors_count 0 0% 81.08% 6ms 1.62% opal_hwloc_base_get_topology 0 0% 81.08% 6ms 1.62% orte_ess_base_proc_binding 1ms 0.27% 81.35% 5ms 1.35% PetscMallocA 0 0% 81.35% 5ms 1.35% VecSetType 0 0% 81.35% 5ms 1.35% _dl_map_object 0 0% 81.35% 4ms 1.08% BidomainSolver::SetupLinearSystem 0 0% 81.35% 4ms 1.08% KSPConvergedDefault 0 0% 81.35% 4ms 1.08% PetscMallocAlign (partial-inline) 0 0% 81.35% 4ms 1.08% VecCreate_Seq 0 0% 81.35% 4ms 1.08% VecDestroy 0 0% 81.35% 4ms 1.08% __GI___libc_free 4ms 1.08% 82.43% 4ms 1.08% __ieee754_exp_fma 0 0% 82.43% 4ms 1.08% _dl_map_object_deps 0 0% 82.43% 4ms 1.08% _dl_open_relocate_one_object (inline) 0 0% 82.43% 4ms 1.08% _dl_relocate_object 3ms 0.81% 83.24% 4ms 1.08% _int_free 0 0% 83.24% 4ms 1.08% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 83.24% 4ms 1.08% boost::serialization::singleton::get_instance 2ms 0.54% 83.78% 4ms 1.08% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 83.78% 4ms 1.08% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 83.78% 4ms 1.08% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 83.78% 4ms 1.08% clone3 0 0% 83.78% 4ms 1.08% event_base_loop 0 0% 83.78% 4ms 1.08% openaux 0 0% 83.78% 4ms 1.08% start_thread 4ms 1.08% 84.86% 4ms 1.08% strcmp 0 0% 84.86% 3ms 0.81% AbstractCardiacProblem::Initialise 0 0% 84.86% 3ms 0.81% CxxTest::RealWorldDescription::tearDown 0 0% 84.86% 3ms 0.81% PetscFinalize 0 0% 84.86% 3ms 0.81% PetscSetup::tearDownWorld 0 0% 84.86% 3ms 0.81% PetscSetupUtils::CommonFinalize 3ms 0.81% 85.68% 3ms 0.81% [libchaste_heart.so] 3ms 0.81% 86.49% 3ms 0.81% __GI___clock_nanosleep 0 0% 86.49% 3ms 0.81% __GI___nanosleep 0 0% 86.49% 3ms 0.81% __GI_exit 0 0% 86.49% 3ms 0.81% __cxa_finalize 0 0% 86.49% 3ms 0.81% __run_exit_handlers 0 0% 86.49% 3ms 0.81% _dl_call_fini 0 0% 86.49% 3ms 0.81% _dl_fini 1ms 0.27% 86.76% 3ms 0.81% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 86.76% 3ms 0.81% elf_dynamic_do_Rela (inline) 0 0% 86.76% 3ms 0.81% elf_machine_rela (inline) 0 0% 86.76% 3ms 0.81% event_del_nolock_ 0 0% 86.76% 3ms 0.81% ompi_mpi_finalize 0 0% 86.76% 3ms 0.81% resolve_map (inline) 0 0% 86.76% 3ms 0.81% usleep 1ms 0.27% 87.03% 2ms 0.54% AbstractCardiacCell::SetVoltage (partial-inline) 0 0% 87.03% 2ms 0.54% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 87.03% 2ms 0.54% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 87.03% 2ms 0.54% PetscFreeAlign 0 0% 87.03% 2ms 0.54% PetscFunctionListDestroy 0 0% 87.03% 2ms 0.54% PetscHMapFuncDestroy (inline) 0 0% 87.03% 2ms 0.54% PetscHeaderDestroy_Private 0 0% 87.03% 2ms 0.54% PetscMemcpy (inline) 0 0% 87.03% 2ms 0.54% PetscMemzero (inline) 2ms 0.54% 87.57% 2ms 0.54% TimeStepper::CalculateNextTime 0 0% 87.57% 2ms 0.54% VecCreate_Seq_Private 1ms 0.27% 87.84% 2ms 0.54% VecDestroy_Seq 0 0% 87.84% 2ms 0.54% XOpenDisplay 0 0% 87.84% 2ms 0.54% [hwloc_gl.so] 0 0% 87.84% 2ms 0.54% [hwloc_pci.so] 0 0% 87.84% 2ms 0.54% [libpciaccess.so.0.11.1] 0 0% 87.84% 2ms 0.54% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 0 0% 87.84% 2ms 0.54% _XConnectXCB 1ms 0.27% 88.11% 2ms 0.54% ___asprintf_chk 0 0% 88.11% 2ms 0.54% ___pthread_mutex_lock 0 0% 88.11% 2ms 0.54% __dlclose 0 0% 88.11% 2ms 0.54% __ieee754_pow_fma 2ms 0.54% 88.65% 2ms 0.54% __memcpy_avx512_unaligned_erms 2ms 0.54% 89.19% 2ms 0.54% __memset_avx512_unaligned_erms 0 0% 89.19% 2ms 0.54% __posix_memalign 0 0% 89.19% 2ms 0.54% __pow 2ms 0.54% 89.73% 2ms 0.54% __strcmp_evex 0 0% 89.73% 2ms 0.54% _dl_close 1ms 0.27% 90.00% 2ms 0.54% _dl_close_worker (inline) 0 0% 90.00% 2ms 0.54% _dl_map_object_from_fd 1ms 0.27% 90.27% 2ms 0.54% check_match 0 0% 90.27% 2ms 0.54% kh_destroy_HMapFunc (inline) 2ms 0.54% 90.81% 2ms 0.54% lll_mutex_lock_optimized (inline) 0 0% 90.81% 2ms 0.54% mca_base_component_repository_release 0 0% 90.81% 2ms 0.54% pci_get_strings 0 0% 90.81% 2ms 0.54% std::pow (inline)