File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 108750ms, 91.74% of 118543ms total Dropped 1095 nodes (cum <= 592.72ms) flat flat% sum% cum cum% 0 0% 0% 118524ms 100% __libc_start_call_main 0 0% 0% 118524ms 100% __libc_start_main_impl 0 0% 0% 118524ms 100% _start 0 0% 0% 118521ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 118521ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 118521ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 118521ms 100% main 0 0% 0% 118484ms 100% CxxTest::RealTestDescription::run 0 0% 0% 118484ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 118484ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 118484ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 118484ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 118483ms 99.95% AbstractConvergenceTester::Converge 6ms 0.0051% 0.0051% 117205ms 98.87% AbstractCardiacProblem::Solve 8ms 0.0067% 0.012% 116437ms 98.22% AbstractDynamicLinearPdeSolver::Solve 5ms 0.0042% 0.016% 65121ms 54.93% LinearSystem::Solve 0 0% 0.016% 64721ms 54.60% KSPSolve 6ms 0.0051% 0.021% 64721ms 54.60% KSPSolve_Private 9ms 0.0076% 0.029% 64302ms 54.24% KSPSolve_SYMMLQ 199ms 0.17% 0.2% 42579ms 35.92% AbstractCardiacTissue::SolveCellSystems 7ms 0.0059% 0.2% 36804ms 31.05% PCApply 8ms 0.0067% 0.21% 36791ms 31.04% PCApply_BJacobi_Singleblock 0 0% 0.21% 34333ms 28.96% KSPSolve_PREONLY (partial-inline) 3ms 0.0025% 0.21% 33186ms 27.99% PCApply_ICC 8ms 0.0067% 0.22% 33183ms 27.99% MatSolve 32667ms 27.56% 27.78% 33175ms 27.99% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1371ms 1.16% 28.93% 32529ms 27.44% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 3ms 0.0025% 28.93% 31663ms 26.71% KSP_PCApply.lto_priv.18 6928ms 5.84% 34.78% 28117ms 23.72% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 9ms 0.0076% 34.79% 21700ms 18.31% MatMult 223ms 0.19% 34.97% 21691ms 18.30% MatMult_SeqAIJ (partial-inline) 21117ms 17.81% 52.79% 21690ms 18.30% MatMult_SeqAIJ_Inode (inline) 1984ms 1.67% 54.46% 14647ms 12.36% CardiacNewtonSolver::Solve 302ms 0.25% 54.72% 9212ms 7.77% AbstractCardiacTissue::UpdateCaches (inline) 1883ms 1.59% 56.31% 8694ms 7.33% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 4367ms 3.68% 59.99% 8525ms 7.19% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1138ms 0.96% 60.95% 7635ms 6.44% BidomainSolver::SetupLinearSystem 1230ms 1.04% 61.99% 7325ms 6.18% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1ms 0.00084% 61.99% 7123ms 6.01% KSP_PCApply (partial-inline) 6ms 0.0051% 61.99% 6502ms 5.48% KSPConvergedDefault 5862ms 4.95% 66.94% 5862ms 4.95% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3883ms 3.28% 70.21% 3932ms 3.32% __ieee754_log_fma 0 0% 70.21% 3742ms 3.16% boost::numeric::ublas::norm_inf (inline) 2483ms 2.09% 72.31% 3742ms 3.16% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.31% 3742ms 3.16% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.31% 3742ms 3.16% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 11ms 0.0093% 72.32% 3266ms 2.76% MatNullSpaceRemove 24ms 0.02% 72.34% 3251ms 2.74% std::pow (inline) 357ms 0.3% 72.64% 3221ms 2.72% __pow 3188ms 2.69% 75.33% 3188ms 2.69% __memcpy_avx_unaligned_erms 0 0% 75.33% 3156ms 2.66% PetscMemcpy (inline) 1731ms 1.46% 76.79% 2883ms 2.43% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 390ms 0.33% 77.12% 2853ms 2.41% __ieee754_pow_fma 21ms 0.018% 77.13% 2682ms 2.26% VecCopy 2672ms 2.25% 79.39% 2672ms 2.25% ddot_ 2ms 0.0017% 79.39% 2659ms 2.24% VecCopy_Seq (partial-inline) 13ms 0.011% 79.40% 2341ms 1.97% VecAXPY 8ms 0.0067% 79.41% 2328ms 1.96% VecAXPY_Seq 2302ms 1.94% 81.35% 2302ms 1.94% daxpy_ 5ms 0.0042% 81.35% 2180ms 1.84% VecDot 0 0% 81.35% 2175ms 1.83% VecDot_Seq 1ms 0.00084% 81.36% 2175ms 1.83% VecXDot_Seq_Private.constprop.0 6ms 0.0051% 81.36% 2056ms 1.73% AbstractFeVolumeIntegralAssembler::DoAssemble 4ms 0.0034% 81.36% 1887ms 1.59% VecMDot 11ms 0.0093% 81.37% 1883ms 1.59% VecMXDot_Private 1859ms 1.57% 82.94% 1868ms 1.58% VecMDot_Seq 36ms 0.03% 82.97% 1718ms 1.45% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1633ms 1.38% 84.35% 1698ms 1.43% exp_inline (inline) 1433ms 1.21% 85.56% 1433ms 1.21% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 0 0% 85.56% 1410ms 1.19% AbstractFeAssemblerInterface::AssembleMatrix (inline) 4ms 0.0034% 85.56% 1368ms 1.15% VecMAXPY 1360ms 1.15% 86.71% 1364ms 1.15% VecMAXPY_Seq 0 0% 86.71% 1169ms 0.99% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.71% 1169ms 0.99% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.71% 1169ms 0.99% boost_numeric_ublas_abs (inline) 1169ms 0.99% 87.69% 1169ms 0.99% std::abs (inline) 1139ms 0.96% 88.66% 1139ms 0.96% __memset_avx2_unaligned_erms 0 0% 88.66% 1131ms 0.95% PetscMemzero (inline) 0 0% 88.66% 1128ms 0.95% CuboidMeshConstructor::Construct 0 0% 88.66% 1127ms 0.95% AbstractTetrahedralMesh::ConstructRegularSlabMesh 2ms 0.0017% 88.66% 1127ms 0.95% DistributedTetrahedralMesh::ConstructCuboid 4ms 0.0034% 88.66% 1126ms 0.95% boost::numeric::ublas::matrix_assign (inline) 193ms 0.16% 88.82% 1112ms 0.94% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.82% 1028ms 0.87% Element::Element 5ms 0.0042% 88.83% 1021ms 0.86% AbstractTetrahedralElement::CalculateJacobian 739ms 0.62% 89.45% 1016ms 0.86% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 2ms 0.0017% 89.45% 971ms 0.82% VecDuplicate 1ms 0.00084% 89.45% 968ms 0.82% AbstractTetrahedralElement::AbstractTetrahedralElement 6ms 0.0051% 89.46% 868ms 0.73% boost::numeric::ublas::c_matrix::c_matrix (inline) 6ms 0.0051% 89.46% 863ms 0.73% BidomainAssembler::ComputeMatrixTerm 4ms 0.0034% 89.47% 846ms 0.71% VecScale 846ms 0.71% 90.18% 846ms 0.71% [libchaste_heart.so] 2ms 0.0017% 90.18% 842ms 0.71% VecScale_Seq 837ms 0.71% 90.89% 837ms 0.71% dscal_ 15ms 0.013% 90.90% 814ms 0.69% PetscMallocA 9ms 0.0076% 90.91% 799ms 0.67% PetscMallocAlign (partial-inline) 0 0% 90.91% 770ms 0.65% AbstractBidomainSolver::FinaliseLinearSystem 242ms 0.2% 91.11% 767ms 0.65% AbstractBidomainSolver::CheckCompatibilityCondition 733ms 0.62% 91.73% 733ms 0.62% log_inline (inline) 2ms 0.0017% 91.73% 699ms 0.59% BidomainProblem::WriteOneStep 5ms 0.0042% 91.74% 684ms 0.58% VecNorm 0 0% 91.74% 674ms 0.57% VecNorm_Seq 0 0% 91.74% 646ms 0.54% AbstractFeAssemblerInterface::Assemble (inline) 2ms 0.0017% 91.74% 604ms 0.51% VecDuplicate_Seq