File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12943ms, 86.11% of 15030ms total Dropped 791 nodes (cum <= 75.15ms) flat flat% sum% cum cum% 0 0% 0% 15019ms 99.93% __libc_start_call_main 0 0% 0% 15019ms 99.93% __libc_start_main_impl 0 0% 0% 15019ms 99.93% _start 0 0% 0% 15016ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 15016ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 15016ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 15016ms 99.91% main 0 0% 0% 14978ms 99.65% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14978ms 99.65% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14978ms 99.65% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0067% 0.0067% 14956ms 99.51% AbstractCardiacProblem::Solve 1ms 0.0067% 0.013% 11313ms 75.27% AbstractDynamicLinearPdeSolver::Solve 36ms 0.24% 0.25% 9230ms 61.41% AbstractCardiacTissue::SolveCellSystems 137ms 0.91% 1.16% 5686ms 37.83% AbstractCardiacCell::ComputeExceptVoltage 83ms 0.55% 1.72% 4924ms 32.76% AbstractOneStepIvpOdeSolver::InternalSolve 199ms 1.32% 3.04% 4202ms 27.96% EulerIvpOdeSolver::CalculateNextYValue 907ms 6.03% 9.08% 3954ms 26.31% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1729ms 11.50% 20.58% 3591ms 23.89% __GI___exp 0 0% 20.58% 3567ms 23.73% MonodomainProblem::WriteOneStep 3ms 0.02% 20.60% 3383ms 22.51% Hdf5DataWriter::PutVector 2ms 0.013% 20.61% 3377ms 22.47% H5Dwrite 4ms 0.027% 20.64% 3322ms 22.10% H5D__write 103ms 0.69% 21.32% 2634ms 17.52% AbstractCardiacTissue::UpdateCaches (inline) 857ms 5.70% 27.03% 2484ms 16.53% CellLuoRudy1991FromCellML::GetIIonic 2ms 0.013% 27.04% 1891ms 12.58% H5D__chunk_collective_write 18ms 0.12% 27.16% 1889ms 12.57% H5F_set_coll_metadata_reads 1619ms 10.77% 37.93% 1783ms 11.86% __ieee754_exp_fma 10ms 0.067% 38.00% 1656ms 11.02% H5FD_s3comms_uriencode 0 0% 38.00% 1316ms 8.76% LinearSystem::Solve 10ms 0.067% 38.06% 1297ms 8.63% H5D__chunk_cacheable 2ms 0.013% 38.08% 1216ms 8.09% H5F_block_write 1ms 0.0067% 38.08% 1214ms 8.08% H5PB_write 1ms 0.0067% 38.09% 1213ms 8.07% H5F__accum_write 0 0% 38.09% 1212ms 8.06% H5FD_write 56ms 0.37% 38.46% 1208ms 8.04% 0 0% 38.46% 1193ms 7.94% KSPSolve 5ms 0.033% 38.50% 1193ms 7.94% KSPSolve_Private 4ms 0.027% 38.52% 1181ms 7.86% KSPSolve_CG 2ms 0.013% 38.54% 1126ms 7.49% H5D__mpio_select_write 473ms 3.15% 41.68% 1105ms 7.35% H5S_select_iterate 0 0% 41.68% 1005ms 6.69% PMPI_File_write_at_all 973ms 6.47% 48.16% 976ms 6.49% __GI_pwritev64 4ms 0.027% 48.18% 851ms 5.66% std::pow (inline) 74ms 0.49% 48.68% 845ms 5.62% __pow 82ms 0.55% 49.22% 771ms 5.13% __ieee754_pow_fma 326ms 2.17% 51.39% 741ms 4.93% MonodomainSolver::SetupLinearSystem 343ms 2.28% 53.67% 725ms 4.82% CellLuoRudy1991FromCellML::VerifyStateVariables 71ms 0.47% 54.15% 657ms 4.37% H5D__chunk_set_sizes 1ms 0.0067% 54.15% 620ms 4.13% PCApply 0 0% 54.15% 613ms 4.08% PCApply_BJacobi_Singleblock 0 0% 54.15% 576ms 3.83% KSPSolve_PREONLY 2ms 0.013% 54.17% 574ms 3.82% MatSolve 0 0% 54.17% 574ms 3.82% PCApply_ICC 561ms 3.73% 57.90% 572ms 3.81% MatSolve_SeqSBAIJ_1_NaturalOrdering 3ms 0.02% 57.92% 541ms 3.60% MatMult 537ms 3.57% 61.49% 538ms 3.58% MatMult_SeqAIJ 58ms 0.39% 61.88% 534ms 3.55% H5S_mpio_space_type 2ms 0.013% 61.89% 420ms 2.79% KSP_PCApply.lto_priv.7 388ms 2.58% 64.47% 388ms 2.58% log_inline (inline) 119ms 0.79% 65.26% 286ms 1.90% TimeStepper::TimeStepper 1ms 0.0067% 65.27% 268ms 1.78% KSPConvergedDefault 267ms 1.78% 67.05% 268ms 1.78% exp_inline (inline) 255ms 1.70% 68.74% 255ms 1.70% TimeStepper::CalculateNextTime 50ms 0.33% 69.08% 237ms 1.58% __GI___libc_malloc 187ms 1.24% 70.32% 220ms 1.46% _int_malloc 7ms 0.047% 70.37% 207ms 1.38% ompi_datatype_create 121ms 0.81% 71.17% 204ms 1.36% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 0 0% 71.17% 203ms 1.35% KSP_PCApply 25ms 0.17% 71.34% 198ms 1.32% H5VM_chunk_index 106ms 0.71% 72.04% 194ms 1.29% top12 (inline) 185ms 1.23% 73.27% 185ms 1.23% [libchaste_heart.so] 0 0% 73.27% 184ms 1.22% Hdf5DataWriter::PutUnlimitedVariable 61ms 0.41% 73.68% 179ms 1.19% std::__cxx11::basic_string::basic_string 7ms 0.047% 73.73% 176ms 1.17% MPI_Type_free 9ms 0.06% 73.79% 174ms 1.16% ompi_datatype_destroy 24ms 0.16% 73.95% 169ms 1.12% __GI___libc_free 32ms 0.21% 74.16% 158ms 1.05% AbstractCardiacCell::SetVoltage (partial-inline) 42ms 0.28% 74.44% 156ms 1.04% ompi_datatype_release_args 4ms 0.027% 74.46% 156ms 1.04% ompi_info_register_framework_params 41ms 0.27% 74.74% 150ms 1% TimeStepper::AdvanceOneTimeStep 60ms 0.4% 75.14% 145ms 0.96% _int_free 113ms 0.75% 75.89% 142ms 0.94% AbstractOneStepIvpOdeSolver::Solve 141ms 0.94% 76.83% 141ms 0.94% std::isinf (inline) 14ms 0.093% 76.92% 138ms 0.92% H5S_set_version 67ms 0.45% 77.37% 132ms 0.88% H5S_hyper_add_span_element 4ms 0.027% 77.39% 132ms 0.88% PMPI_File_set_view 3ms 0.02% 77.41% 131ms 0.87% PMPI_Type_create_resized 110ms 0.73% 78.14% 129ms 0.86% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 46ms 0.31% 78.45% 124ms 0.83% H5VM_array_calc 124ms 0.83% 79.27% 124ms 0.83% ddot_ 4ms 0.027% 79.30% 121ms 0.81% ompi_datatype_duplicate 7ms 0.047% 79.35% 107ms 0.71% std::char_traits::length (inline) 81ms 0.54% 79.89% 104ms 0.69% AbstractParameterisedSystem::GetAnyVariable 99ms 0.66% 80.55% 103ms 0.69% AbstractParameterisedSystem::SetAnyVariable 103ms 0.69% 81.23% 103ms 0.69% __strlen_avx2 2ms 0.013% 81.24% 101ms 0.67% VecNorm 98ms 0.65% 81.90% 98ms 0.65% __ieee754_log_fma 98ms 0.65% 82.55% 98ms 0.65% __memcpy_avx_unaligned_erms 31ms 0.21% 82.75% 97ms 0.65% __libc_calloc 24ms 0.16% 82.91% 97ms 0.65% ompi_datatype_set_args 1ms 0.0067% 82.92% 96ms 0.64% VecDuplicate 3ms 0.02% 82.94% 95ms 0.63% VecDuplicate_MPI 2ms 0.013% 82.95% 95ms 0.63% opal_datatype_create_desc 92ms 0.61% 83.57% 92ms 0.61% asuint64 (inline) 9ms 0.06% 83.63% 91ms 0.61% PMPI_Type_vector 0 0% 83.63% 90ms 0.6% VecNorm_Seq 88ms 0.59% 84.21% 88ms 0.59% H5VM_array_offset_pre 39ms 0.26% 84.47% 87ms 0.58% AbstractCardiacCell::GetVoltage (partial-inline) 38ms 0.25% 84.72% 87ms 0.58% H5SL_search 87ms 0.58% 85.30% 87ms 0.58% H5VM_chunk_index_scaled 4ms 0.027% 85.33% 83ms 0.55% MPI_Type_contiguous 2ms 0.013% 85.34% 82ms 0.55% H5D__chunk_allocated 82ms 0.55% 85.89% 82ms 0.55% [libm.so.6] 29ms 0.19% 86.08% 81ms 0.54% H5S__hyper_rebuild 5ms 0.033% 86.11% 77ms 0.51% H5D__select_write