File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 117080ms, 91.42% of 128069ms total Dropped 1160 nodes (cum <= 640.35ms) flat flat% sum% cum cum% 0 0% 0% 128054ms 100% __libc_start_call_main 0 0% 0% 128054ms 100% __libc_start_main_impl 0 0% 0% 128054ms 100% _start 0 0% 0% 128050ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 128050ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 128050ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 128050ms 100% main 0 0% 0% 128010ms 100% CxxTest::RealTestDescription::run 0 0% 0% 128010ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 128010ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 128010ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 128010ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 1ms 0.00078% 0.00078% 128009ms 100% AbstractConvergenceTester::Converge 6ms 0.0047% 0.0055% 126812ms 99.02% AbstractCardiacProblem::Solve 14ms 0.011% 0.016% 126006ms 98.39% AbstractDynamicLinearPdeSolver::Solve 3ms 0.0023% 0.019% 69211ms 54.04% LinearSystem::Solve 4ms 0.0031% 0.022% 68640ms 53.60% KSPSolve 13ms 0.01% 0.032% 68637ms 53.59% KSPSolve_Private 13ms 0.01% 0.042% 68271ms 53.31% KSPSolve_SYMMLQ 506ms 0.4% 0.44% 47720ms 37.26% AbstractCardiacTissue::SolveCellSystems 8ms 0.0062% 0.44% 39739ms 31.03% PCApply 5ms 0.0039% 0.45% 39720ms 31.01% PCApply_BJacobi_Singleblock 0 0% 0.45% 37569ms 29.33% KSPSolve_PREONLY (partial-inline) 955ms 0.75% 1.19% 37287ms 29.11% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0016% 1.19% 36350ms 28.38% PCApply_ICC 6ms 0.0047% 1.20% 36348ms 28.38% MatSolve 35972ms 28.09% 29.29% 36342ms 28.38% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 4ms 0.0031% 29.29% 34205ms 26.71% KSP_PCApply.lto_priv.18 7708ms 6.02% 35.31% 33170ms 25.90% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 9ms 0.007% 35.32% 22517ms 17.58% MatMult 296ms 0.23% 35.55% 22508ms 17.57% MatMult_SeqAIJ (partial-inline) 21993ms 17.17% 52.72% 22506ms 17.57% MatMult_SeqAIJ_Inode (inline) 2253ms 1.76% 54.48% 17083ms 13.34% CardiacNewtonSolver::Solve 5657ms 4.42% 58.90% 10174ms 7.94% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1485ms 1.16% 60.06% 9902ms 7.73% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 225ms 0.18% 60.23% 8965ms 7.00% AbstractCardiacTissue::UpdateCaches (inline) 1708ms 1.33% 61.57% 8327ms 6.50% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 8145ms 6.36% 67.93% 8145ms 6.36% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 1120ms 0.87% 68.80% 7876ms 6.15% BidomainSolver::SetupLinearSystem 1ms 0.00078% 68.80% 7577ms 5.92% KSP_PCApply (partial-inline) 6ms 0.0047% 68.81% 7081ms 5.53% KSPConvergedDefault 4216ms 3.29% 72.10% 4298ms 3.36% __ieee754_log_fma 0 0% 72.10% 4166ms 3.25% boost::numeric::ublas::norm_inf (inline) 2894ms 2.26% 74.36% 4166ms 3.25% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.36% 4166ms 3.25% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.36% 4166ms 3.25% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3565ms 2.78% 77.14% 3565ms 2.78% ddot_ 7ms 0.0055% 77.15% 3395ms 2.65% MatNullSpaceRemove 28ms 0.022% 77.17% 3177ms 2.48% std::pow (inline) 404ms 0.32% 77.48% 3135ms 2.45% __pow 1913ms 1.49% 78.98% 2961ms 2.31% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 7ms 0.0055% 78.98% 2899ms 2.26% VecDot 1ms 0.00078% 78.98% 2892ms 2.26% VecDot_Seq 0 0% 78.98% 2891ms 2.26% VecXDot_Seq_Private.constprop.0 2722ms 2.13% 81.11% 2722ms 2.13% __memcpy_avx_unaligned_erms 363ms 0.28% 81.39% 2697ms 2.11% __ieee754_pow_fma 0 0% 81.39% 2658ms 2.08% PetscMemcpy (inline) 23ms 0.018% 81.41% 2329ms 1.82% VecCopy 3ms 0.0023% 81.41% 2302ms 1.80% VecCopy_Seq (partial-inline) 18ms 0.014% 81.43% 2211ms 1.73% VecAXPY 5ms 0.0039% 81.43% 2193ms 1.71% VecAXPY_Seq 2170ms 1.69% 83.12% 2170ms 1.69% daxpy_ 5ms 0.0039% 83.13% 2112ms 1.65% VecMDot 13ms 0.01% 83.14% 2107ms 1.65% VecMXDot_Private 2085ms 1.63% 84.77% 2090ms 1.63% VecMDot_Seq 1ms 0.00078% 84.77% 2026ms 1.58% AbstractFeVolumeIntegralAssembler::DoAssemble 25ms 0.02% 84.79% 1665ms 1.30% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1539ms 1.20% 85.99% 1596ms 1.25% exp_inline (inline) 0 0% 85.99% 1391ms 1.09% AbstractFeAssemblerInterface::AssembleMatrix (inline) 5ms 0.0039% 85.99% 1276ms 1% VecMAXPY 1267ms 0.99% 86.98% 1271ms 0.99% VecMAXPY_Seq 0 0% 86.98% 1262ms 0.99% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.98% 1262ms 0.99% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.98% 1262ms 0.99% boost_numeric_ublas_abs (inline) 1262ms 0.99% 87.97% 1262ms 0.99% std::abs (inline) 2ms 0.0016% 87.97% 1104ms 0.86% boost::numeric::ublas::matrix_assign (inline) 228ms 0.18% 88.15% 1097ms 0.86% boost::numeric::ublas::indexing_matrix_assign 0 0% 88.15% 1037ms 0.81% CuboidMeshConstructor::Construct 0 0% 88.15% 1036ms 0.81% AbstractTetrahedralMesh::ConstructRegularSlabMesh 1ms 0.00078% 88.15% 1036ms 0.81% DistributedTetrahedralMesh::ConstructCuboid 3ms 0.0023% 88.15% 1000ms 0.78% VecNorm 3ms 0.0023% 88.15% 992ms 0.77% VecNorm_Seq 676ms 0.53% 88.68% 991ms 0.77% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 990ms 0.77% 89.45% 990ms 0.77% [libchaste_heart.so] 2ms 0.0016% 89.45% 947ms 0.74% Element::Element 5ms 0.0039% 89.46% 919ms 0.72% AbstractTetrahedralElement::CalculateJacobian 3ms 0.0023% 89.46% 883ms 0.69% AbstractTetrahedralElement::AbstractTetrahedralElement 8ms 0.0062% 89.47% 880ms 0.69% BidomainAssembler::ComputeMatrixTerm 6ms 0.0047% 89.47% 853ms 0.67% boost::numeric::ublas::c_matrix::c_matrix (inline) 1ms 0.00078% 89.47% 846ms 0.66% AbstractBidomainSolver::FinaliseLinearSystem 277ms 0.22% 89.69% 843ms 0.66% AbstractBidomainSolver::CheckCompatibilityCondition 4ms 0.0031% 89.69% 829ms 0.65% VecScale 5ms 0.0039% 89.70% 825ms 0.64% VecScale_Seq 819ms 0.64% 90.34% 819ms 0.64% dscal_ 1ms 0.00078% 90.34% 760ms 0.59% VecNorm_MPI 0 0% 90.34% 759ms 0.59% VecNorm_MPI_Default.constprop.0 2ms 0.0016% 90.34% 731ms 0.57% BidomainProblem::WriteOneStep 697ms 0.54% 90.88% 697ms 0.54% log_inline (inline) 688ms 0.54% 91.42% 688ms 0.54% __memset_avx2_unaligned_erms 0 0% 91.42% 676ms 0.53% PetscMemzero (inline)