File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12673ms, 85.51% of 14821ms total Dropped 740 nodes (cum <= 74.11ms) flat flat% sum% cum cum% 0 0% 0% 14810ms 99.93% __libc_start_call_main 0 0% 0% 14810ms 99.93% __libc_start_main_impl 0 0% 0% 14810ms 99.93% _start 0 0% 0% 14807ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14807ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14807ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14807ms 99.91% main 0 0% 0% 14764ms 99.62% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14764ms 99.62% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14764ms 99.62% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14741ms 99.46% AbstractCardiacProblem::Solve 3ms 0.02% 0.034% 11341ms 76.52% AbstractDynamicLinearPdeSolver::Solve 55ms 0.37% 0.4% 8912ms 60.13% AbstractCardiacTissue::SolveCellSystems 94ms 0.63% 1.04% 5361ms 36.17% AbstractCardiacCell::ComputeExceptVoltage 105ms 0.71% 1.75% 4728ms 31.90% AbstractOneStepIvpOdeSolver::InternalSolve 160ms 1.08% 2.83% 4019ms 27.12% EulerIvpOdeSolver::CalculateNextYValue 868ms 5.86% 8.68% 3827ms 25.82% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1793ms 12.10% 20.78% 3505ms 23.65% __GI___exp 0 0% 20.78% 3334ms 22.50% MonodomainProblem::WriteOneStep 1ms 0.0067% 20.79% 3178ms 21.44% H5Dwrite 3ms 0.02% 20.81% 3169ms 21.38% Hdf5DataWriter::PutVector 4ms 0.027% 20.84% 3154ms 21.28% H5D__write 127ms 0.86% 21.69% 2821ms 19.03% AbstractCardiacTissue::UpdateCaches (inline) 754ms 5.09% 26.78% 2621ms 17.68% CellLuoRudy1991FromCellML::GetIIonic 1ms 0.0067% 26.79% 1993ms 13.45% H5D__chunk_collective_write 22ms 0.15% 26.93% 1992ms 13.44% H5F_set_coll_metadata_reads 24ms 0.16% 27.10% 1804ms 12.17% H5FD_s3comms_uriencode 2ms 0.013% 27.11% 1673ms 11.29% LinearSystem::Solve 1311ms 8.85% 35.96% 1640ms 11.07% __ieee754_exp_fma 0 0% 35.96% 1540ms 10.39% KSPSolve 3ms 0.02% 35.98% 1540ms 10.39% KSPSolve_Private 2ms 0.013% 35.99% 1524ms 10.28% KSPSolve_CG 2ms 0.013% 36.00% 1432ms 9.66% H5F_block_write 54ms 0.36% 36.37% 1431ms 9.66% 5ms 0.034% 36.40% 1430ms 9.65% H5PB_write 2ms 0.013% 36.41% 1425ms 9.61% H5F__accum_write 2ms 0.013% 36.43% 1423ms 9.60% H5FD_write 2ms 0.013% 36.44% 1322ms 8.92% H5D__mpio_select_write 0 0% 36.44% 1202ms 8.11% PMPI_File_write_at_all 1177ms 7.94% 44.38% 1180ms 7.96% __GI_pwritev64 11ms 0.074% 44.46% 1036ms 6.99% H5D__chunk_cacheable 77ms 0.52% 44.98% 1024ms 6.91% __pow 0 0% 44.98% 1024ms 6.91% std::pow (inline) 81ms 0.55% 45.52% 945ms 6.38% __ieee754_pow_fma 299ms 2.02% 47.54% 892ms 6.02% H5S_select_iterate 3ms 0.02% 47.56% 877ms 5.92% PCApply 2ms 0.013% 47.57% 871ms 5.88% PCApply_BJacobi_Singleblock 0 0% 47.57% 839ms 5.66% KSPSolve_PREONLY 1ms 0.0067% 47.58% 835ms 5.63% MatSolve 0 0% 47.58% 835ms 5.63% PCApply_ICC 827ms 5.58% 53.16% 834ms 5.63% MatSolve_SeqSBAIJ_1_NaturalOrdering 332ms 2.24% 55.40% 732ms 4.94% MonodomainSolver::SetupLinearSystem 2ms 0.013% 55.41% 637ms 4.30% KSP_PCApply.lto_priv.7 72ms 0.49% 55.90% 606ms 4.09% H5D__chunk_set_sizes 2ms 0.013% 55.91% 575ms 3.88% MatMult 570ms 3.85% 59.76% 573ms 3.87% MatMult_SeqAIJ 495ms 3.34% 63.10% 495ms 3.34% log_inline (inline) 230ms 1.55% 64.65% 470ms 3.17% CellLuoRudy1991FromCellML::VerifyStateVariables 47ms 0.32% 64.97% 456ms 3.08% H5S_mpio_space_type 335ms 2.26% 67.23% 342ms 2.31% exp_inline (inline) 3ms 0.02% 67.25% 312ms 2.11% KSPConvergedDefault 117ms 0.79% 68.04% 280ms 1.89% TimeStepper::TimeStepper 221ms 1.49% 69.53% 270ms 1.82% top12 (inline) 0 0% 69.53% 243ms 1.64% KSP_PCApply 231ms 1.56% 71.09% 231ms 1.56% [libchaste_heart.so] 45ms 0.3% 71.39% 216ms 1.46% __GI___libc_malloc 8ms 0.054% 71.45% 208ms 1.40% H5VM_chunk_index 159ms 1.07% 72.52% 205ms 1.38% _int_malloc 54ms 0.36% 72.88% 195ms 1.32% AbstractCardiacCell::SetVoltage (partial-inline) 4ms 0.027% 72.91% 188ms 1.27% ompi_datatype_create 6ms 0.04% 72.95% 167ms 1.13% ompi_datatype_destroy 6ms 0.04% 72.99% 166ms 1.12% MPI_Type_free 1ms 0.0067% 73.00% 165ms 1.11% Hdf5DataWriter::PutUnlimitedVariable 37ms 0.25% 73.25% 160ms 1.08% __GI___libc_free 107ms 0.72% 73.97% 157ms 1.06% AbstractOneStepIvpOdeSolver::Solve 156ms 1.05% 75.02% 156ms 1.05% ddot_ 151ms 1.02% 76.04% 151ms 1.02% TimeStepper::CalculateNextTime 38ms 0.26% 76.30% 148ms 1% ompi_datatype_release_args 3ms 0.02% 76.32% 148ms 1% ompi_info_register_framework_params 142ms 0.96% 77.28% 142ms 0.96% asuint64 (inline) 21ms 0.14% 77.42% 133ms 0.9% H5S_set_version 3ms 0.02% 77.44% 131ms 0.88% PMPI_File_set_view 1ms 0.0067% 77.44% 128ms 0.86% VecNorm 98ms 0.66% 78.11% 126ms 0.85% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 46ms 0.31% 78.42% 123ms 0.83% _int_free 4ms 0.027% 78.44% 123ms 0.83% ompi_datatype_duplicate 2ms 0.013% 78.46% 120ms 0.81% VecNorm_Seq 2ms 0.013% 78.47% 118ms 0.8% PMPI_Type_create_resized 85ms 0.57% 79.04% 117ms 0.79% AbstractParameterisedSystem::SetAnyVariable 38ms 0.26% 79.30% 112ms 0.76% H5VM_array_calc 112ms 0.76% 80.06% 112ms 0.76% __memcpy_avx_unaligned_erms 41ms 0.28% 80.33% 111ms 0.75% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 111ms 0.75% 81.08% 111ms 0.75% __ieee754_log_fma 106ms 0.72% 81.80% 106ms 0.72% H5VM_array_offset_pre 80ms 0.54% 82.34% 102ms 0.69% AbstractParameterisedSystem::GetAnyVariable 0 0% 82.34% 99ms 0.67% VecDuplicate 5ms 0.034% 82.37% 99ms 0.67% VecDuplicate_MPI 95ms 0.64% 83.01% 95ms 0.64% H5VM_chunk_index_scaled 34ms 0.23% 83.24% 90ms 0.61% AbstractCardiacCell::GetVoltage (partial-inline) 0 0% 83.24% 90ms 0.61% std::vector::_M_assign_aux (inline) 0 0% 83.24% 90ms 0.61% std::vector::assign (inline) 0 0% 83.24% 87ms 0.59% H5D__chunk_allocated 4ms 0.027% 83.27% 87ms 0.59% opal_datatype_create_desc 1ms 0.0067% 83.27% 86ms 0.58% H5D__select_write 86ms 0.58% 83.85% 86ms 0.58% std::isinf (inline) 1ms 0.0067% 83.86% 85ms 0.57% H5Dgather 43ms 0.29% 84.15% 85ms 0.57% H5S_hyper_add_span_element 1ms 0.0067% 84.16% 84ms 0.57% H5D__contig_fill 1ms 0.0067% 84.16% 83ms 0.56% H5VM_opvv 83ms 0.56% 84.72% 83ms 0.56% TimeStepper::GetNextTimeStep 23ms 0.16% 84.88% 83ms 0.56% __libc_calloc 0 0% 84.88% 82ms 0.55% H5D__contig_write 77ms 0.52% 85.40% 77ms 0.52% ReplicatableVector::operator[] 0 0% 85.40% 77ms 0.52% VecTDot 0 0% 85.40% 77ms 0.52% VecTDot_Seq 0 0% 85.40% 77ms 0.52% VecXDot_Seq_Private.constprop.0 16ms 0.11% 85.51% 76ms 0.51% std::__copy_move::__copy_m (inline) 0 0% 85.51% 76ms 0.51% std::__copy_move_a (inline) 0 0% 85.51% 76ms 0.51% std::__copy_move_a1 (inline) 0 0% 85.51% 76ms 0.51% std::__copy_move_a2 (inline) 0 0% 85.51% 76ms 0.51% std::copy (inline)