File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 111075ms, 91.88% of 120890ms total Dropped 1149 nodes (cum <= 604.45ms) flat flat% sum% cum cum% 0 0% 0% 120872ms 100% __libc_start_call_main 0 0% 0% 120872ms 100% __libc_start_main_impl 0 0% 0% 120872ms 100% _start 0 0% 0% 120870ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 120870ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 120870ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 120870ms 100% main 0 0% 0% 120830ms 100% CxxTest::RealTestDescription::run 0 0% 0% 120830ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 120830ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 120830ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 120830ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 1ms 0.00083% 0.00083% 120829ms 99.95% AbstractConvergenceTester::Converge 3ms 0.0025% 0.0033% 119559ms 98.90% AbstractCardiacProblem::Solve 8ms 0.0066% 0.0099% 118697ms 98.19% AbstractDynamicLinearPdeSolver::Solve 9ms 0.0074% 0.017% 66884ms 55.33% LinearSystem::Solve 0 0% 0.017% 66346ms 54.88% KSPSolve 13ms 0.011% 0.028% 66346ms 54.88% KSPSolve_Private 8ms 0.0066% 0.035% 65920ms 54.53% KSPSolve_SYMMLQ 198ms 0.16% 0.2% 42958ms 35.53% AbstractCardiacTissue::SolveCellSystems 6ms 0.005% 0.2% 37051ms 30.65% PCApply 5ms 0.0041% 0.21% 37038ms 30.64% PCApply_BJacobi_Singleblock 2ms 0.0017% 0.21% 34312ms 28.38% KSPSolve_PREONLY (partial-inline) 2ms 0.0017% 0.21% 33185ms 27.45% PCApply_ICC 6ms 0.005% 0.22% 33183ms 27.45% MatSolve 32694ms 27.04% 27.26% 33177ms 27.44% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1319ms 1.09% 28.35% 33131ms 27.41% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 1ms 0.00083% 28.35% 32020ms 26.49% KSP_PCApply.lto_priv.18 6967ms 5.76% 34.12% 28750ms 23.78% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 11ms 0.0091% 34.12% 22719ms 18.79% MatMult 288ms 0.24% 34.36% 22708ms 18.78% MatMult_SeqAIJ (partial-inline) 22202ms 18.37% 52.73% 22708ms 18.78% MatMult_SeqAIJ_Inode (inline) 1968ms 1.63% 54.36% 14870ms 12.30% CardiacNewtonSolver::Solve 323ms 0.27% 54.62% 9051ms 7.49% AbstractCardiacTissue::UpdateCaches (inline) 4463ms 3.69% 58.31% 8712ms 7.21% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1941ms 1.61% 59.92% 8523ms 7.05% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1062ms 0.88% 60.80% 7859ms 6.50% BidomainSolver::SetupLinearSystem 1223ms 1.01% 61.81% 7496ms 6.20% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 0 0% 61.81% 7091ms 5.87% KSP_PCApply (partial-inline) 7ms 0.0058% 61.82% 6469ms 5.35% KSPConvergedDefault 6011ms 4.97% 66.79% 6011ms 4.97% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3900ms 3.23% 70.01% 3945ms 3.26% __ieee754_log_fma 0 0% 70.01% 3778ms 3.13% boost::numeric::ublas::norm_inf (inline) 2543ms 2.10% 72.12% 3778ms 3.13% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.12% 3778ms 3.13% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.12% 3778ms 3.13% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 4ms 0.0033% 72.12% 3458ms 2.86% MatNullSpaceRemove 3366ms 2.78% 74.91% 3366ms 2.78% __memcpy_avx_unaligned_erms 0 0% 74.91% 3324ms 2.75% PetscMemcpy (inline) 30ms 0.025% 74.93% 3223ms 2.67% std::pow (inline) 373ms 0.31% 75.24% 3186ms 2.64% __pow 1749ms 1.45% 76.69% 2889ms 2.39% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 22ms 0.018% 76.70% 2873ms 2.38% VecCopy 2854ms 2.36% 79.07% 2854ms 2.36% ddot_ 5ms 0.0041% 79.07% 2845ms 2.35% VecCopy_Seq (partial-inline) 376ms 0.31% 79.38% 2809ms 2.32% __ieee754_pow_fma 18ms 0.015% 79.40% 2500ms 2.07% VecAXPY 10ms 0.0083% 79.40% 2482ms 2.05% VecAXPY_Seq 2464ms 2.04% 81.44% 2464ms 2.04% daxpy_ 11ms 0.0091% 81.45% 2346ms 1.94% VecDot 3ms 0.0025% 81.45% 2335ms 1.93% VecDot_Seq 3ms 0.0025% 81.46% 2332ms 1.93% VecXDot_Seq_Private.constprop.0 1ms 0.00083% 81.46% 2080ms 1.72% AbstractFeVolumeIntegralAssembler::DoAssemble 2ms 0.0017% 81.46% 2005ms 1.66% VecMDot 8ms 0.0066% 81.46% 2003ms 1.66% VecMXDot_Private 1984ms 1.64% 83.11% 1992ms 1.65% VecMDot_Seq 25ms 0.021% 83.13% 1700ms 1.41% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1630ms 1.35% 84.48% 1695ms 1.40% exp_inline (inline) 7ms 0.0058% 84.48% 1449ms 1.20% VecMAXPY 1436ms 1.19% 85.67% 1442ms 1.19% VecMAXPY_Seq 0 0% 85.67% 1427ms 1.18% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1409ms 1.17% 86.83% 1409ms 1.17% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 1242ms 1.03% 87.86% 1242ms 1.03% __memset_avx2_unaligned_erms 0 0% 87.86% 1226ms 1.01% PetscMemzero (inline) 0 0% 87.86% 1137ms 0.94% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 87.86% 1137ms 0.94% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 87.86% 1137ms 0.94% boost_numeric_ublas_abs (inline) 1137ms 0.94% 88.80% 1137ms 0.94% std::abs (inline) 0 0% 88.80% 1112ms 0.92% CuboidMeshConstructor::Construct 0 0% 88.80% 1111ms 0.92% AbstractTetrahedralMesh::ConstructRegularSlabMesh 1ms 0.00083% 88.80% 1111ms 0.92% DistributedTetrahedralMesh::ConstructCuboid 9ms 0.0074% 88.81% 1105ms 0.91% boost::numeric::ublas::matrix_assign (inline) 248ms 0.21% 89.02% 1091ms 0.9% boost::numeric::ublas::indexing_matrix_assign 787ms 0.65% 89.67% 1059ms 0.88% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 4ms 0.0033% 89.67% 1043ms 0.86% VecDuplicate 1ms 0.00083% 89.67% 1010ms 0.84% Element::Element 4ms 0.0033% 89.67% 1007ms 0.83% AbstractTetrahedralElement::CalculateJacobian 1ms 0.00083% 89.67% 946ms 0.78% AbstractTetrahedralElement::AbstractTetrahedralElement 864ms 0.71% 90.39% 864ms 0.71% [libchaste_heart.so] 13ms 0.011% 90.40% 862ms 0.71% PetscMallocA 4ms 0.0033% 90.40% 858ms 0.71% VecScale 1ms 0.00083% 90.40% 854ms 0.71% BidomainAssembler::ComputeMatrixTerm 2ms 0.0017% 90.41% 854ms 0.71% VecScale_Seq 850ms 0.7% 91.11% 850ms 0.7% dscal_ 10ms 0.0083% 91.12% 849ms 0.7% PetscMallocAlign (partial-inline) 3ms 0.0025% 91.12% 830ms 0.69% boost::numeric::ublas::c_matrix::c_matrix (inline) 0 0% 91.12% 798ms 0.66% BidomainProblem::WriteOneStep 2ms 0.0017% 91.12% 794ms 0.66% VecNorm 1ms 0.00083% 91.12% 789ms 0.65% VecNorm_Seq 699ms 0.58% 91.70% 699ms 0.58% log_inline (inline) 0 0% 91.70% 681ms 0.56% AbstractBidomainSolver::FinaliseLinearSystem 214ms 0.18% 91.88% 678ms 0.56% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 91.88% 653ms 0.54% AbstractFeAssemblerInterface::Assemble (inline) 4ms 0.0033% 91.88% 643ms 0.53% VecDuplicate_Seq