File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12921ms, 86.51% of 14935ms total Dropped 686 nodes (cum <= 74.67ms) flat flat% sum% cum cum% 0 0% 0% 14928ms 100% __libc_start_call_main 0 0% 0% 14928ms 100% __libc_start_main_impl 0 0% 0% 14928ms 100% _start 0 0% 0% 14926ms 99.94% main 0 0% 0% 14925ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14925ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14925ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14888ms 99.69% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14888ms 99.69% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14888ms 99.69% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14865ms 99.53% AbstractCardiacProblem::Solve 1ms 0.0067% 0.027% 11437ms 76.58% AbstractDynamicLinearPdeSolver::Solve 37ms 0.25% 0.27% 9197ms 61.58% AbstractCardiacTissue::SolveCellSystems 128ms 0.86% 1.13% 5751ms 38.51% AbstractCardiacCell::ComputeExceptVoltage 162ms 1.08% 2.22% 5024ms 33.64% AbstractOneStepIvpOdeSolver::InternalSolve 184ms 1.23% 3.45% 4245ms 28.42% EulerIvpOdeSolver::CalculateNextYValue 882ms 5.91% 9.35% 4006ms 26.82% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1731ms 11.59% 20.94% 3668ms 24.56% __GI___exp 3ms 0.02% 20.96% 3358ms 22.48% MonodomainProblem::WriteOneStep 3ms 0.02% 20.98% 3209ms 21.49% Hdf5DataWriter::PutVector 0 0% 20.98% 3178ms 21.28% H5Dwrite 3ms 0.02% 21.00% 3146ms 21.06% H5D__write 104ms 0.7% 21.70% 2613ms 17.50% AbstractCardiacTissue::UpdateCaches (inline) 810ms 5.42% 27.12% 2462ms 16.48% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.12% 1867ms 12.50% H5D__chunk_collective_write 19ms 0.13% 27.25% 1867ms 12.50% H5F_set_coll_metadata_reads 1708ms 11.44% 38.69% 1846ms 12.36% __ieee754_exp_fma 18ms 0.12% 38.81% 1626ms 10.89% H5FD_s3comms_uriencode 1ms 0.0067% 38.81% 1499ms 10.04% LinearSystem::Solve 4ms 0.027% 38.84% 1376ms 9.21% KSPSolve 1ms 0.0067% 38.85% 1372ms 9.19% KSPSolve_Private 3ms 0.02% 38.87% 1361ms 9.11% KSPSolve_CG 4ms 0.027% 38.90% 1236ms 8.28% H5F_block_write 2ms 0.013% 38.91% 1232ms 8.25% H5PB_write 3ms 0.02% 38.93% 1230ms 8.24% H5FD_write 0 0% 38.93% 1230ms 8.24% H5F__accum_write 35ms 0.23% 39.16% 1220ms 8.17% 8ms 0.054% 39.22% 1177ms 7.88% H5D__chunk_cacheable 5ms 0.033% 39.25% 1152ms 7.71% H5D__mpio_select_write 0 0% 39.25% 1036ms 6.94% PMPI_File_write_at_all 1011ms 6.77% 46.02% 1012ms 6.78% __GI_pwritev64 416ms 2.79% 48.80% 1006ms 6.74% H5S_select_iterate 11ms 0.074% 48.88% 885ms 5.93% std::pow (inline) 77ms 0.52% 49.39% 873ms 5.85% __pow 107ms 0.72% 50.11% 796ms 5.33% __ieee754_pow_fma 317ms 2.12% 52.23% 720ms 4.82% MonodomainSolver::SetupLinearSystem 0 0% 52.23% 719ms 4.81% PCApply 1ms 0.0067% 52.24% 711ms 4.76% PCApply_BJacobi_Singleblock 0 0% 52.24% 683ms 4.57% KSPSolve_PREONLY 3ms 0.02% 52.26% 677ms 4.53% MatSolve 0 0% 52.26% 677ms 4.53% PCApply_ICC 665ms 4.45% 56.71% 674ms 4.51% MatSolve_SeqSBAIJ_1_NaturalOrdering 327ms 2.19% 58.90% 670ms 4.49% CellLuoRudy1991FromCellML::VerifyStateVariables 59ms 0.4% 59.30% 607ms 4.06% H5D__chunk_set_sizes 2ms 0.013% 59.31% 604ms 4.04% MatMult 601ms 4.02% 63.33% 602ms 4.03% MatMult_SeqAIJ 0 0% 63.33% 527ms 3.53% KSP_PCApply.lto_priv.7 36ms 0.24% 63.58% 458ms 3.07% H5S_mpio_space_type 384ms 2.57% 66.15% 384ms 2.57% log_inline (inline) 2ms 0.013% 66.16% 262ms 1.75% KSPConvergedDefault 118ms 0.79% 66.95% 260ms 1.74% TimeStepper::TimeStepper 257ms 1.72% 68.67% 259ms 1.73% exp_inline (inline) 174ms 1.17% 69.84% 214ms 1.43% _int_malloc 36ms 0.24% 70.08% 210ms 1.41% __GI___libc_malloc 13ms 0.087% 70.16% 198ms 1.33% H5VM_chunk_index 0 0% 70.16% 193ms 1.29% KSP_PCApply 8ms 0.054% 70.22% 192ms 1.29% ompi_datatype_destroy 7ms 0.047% 70.26% 191ms 1.28% MPI_Type_free 49ms 0.33% 70.59% 183ms 1.23% __GI___libc_free 100ms 0.67% 71.26% 181ms 1.21% top12 (inline) 87ms 0.58% 71.84% 171ms 1.14% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 7ms 0.047% 71.89% 169ms 1.13% ompi_info_register_framework_params 143ms 0.96% 72.85% 168ms 1.12% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 44ms 0.29% 73.14% 168ms 1.12% ompi_datatype_release_args 165ms 1.10% 74.25% 165ms 1.10% std::isinf (inline) 4ms 0.027% 74.28% 162ms 1.08% ompi_datatype_create 161ms 1.08% 75.35% 161ms 1.08% [libchaste_heart.so] 160ms 1.07% 76.42% 160ms 1.07% ddot_ 158ms 1.06% 77.48% 158ms 1.06% TimeStepper::CalculateNextTime 2ms 0.013% 77.50% 146ms 0.98% Hdf5DataWriter::PutUnlimitedVariable 19ms 0.13% 77.62% 138ms 0.92% H5S_set_version 99ms 0.66% 78.29% 137ms 0.92% AbstractOneStepIvpOdeSolver::Solve 137ms 0.92% 79.20% 137ms 0.92% __memcpy_avx_unaligned_erms 50ms 0.33% 79.54% 133ms 0.89% _int_free 20ms 0.13% 79.67% 128ms 0.86% AbstractCardiacCell::SetVoltage (partial-inline) 52ms 0.35% 80.02% 119ms 0.8% H5VM_array_calc 3ms 0.02% 80.04% 114ms 0.76% PMPI_File_set_view 2ms 0.013% 80.05% 113ms 0.76% VecNorm 11ms 0.074% 80.13% 113ms 0.76% std::vector::_M_assign_aux (inline) 0 0% 80.13% 113ms 0.76% std::vector::assign (inline) 112ms 0.75% 80.88% 112ms 0.75% __ieee754_log_fma 51ms 0.34% 81.22% 107ms 0.72% std::__cxx11::basic_string::basic_string 0 0% 81.22% 105ms 0.7% VecNorm_Seq 103ms 0.69% 81.91% 103ms 0.69% H5VM_chunk_index_scaled 9ms 0.06% 81.97% 100ms 0.67% PMPI_Type_create_resized 30ms 0.2% 82.17% 98ms 0.66% __libc_calloc 3ms 0.02% 82.19% 98ms 0.66% std::__copy_move::__copy_m (inline) 0 0% 82.19% 98ms 0.66% std::__copy_move_a (inline) 0 0% 82.19% 98ms 0.66% std::__copy_move_a1 (inline) 0 0% 82.19% 98ms 0.66% std::__copy_move_a2 (inline) 0 0% 82.19% 98ms 0.66% std::copy (inline) 59ms 0.4% 82.58% 97ms 0.65% H5S_hyper_add_span_element 1ms 0.0067% 82.59% 94ms 0.63% VecDuplicate 3ms 0.02% 82.61% 93ms 0.62% VecDuplicate_MPI 74ms 0.5% 83.11% 92ms 0.62% AbstractParameterisedSystem::GetAnyVariable 1ms 0.0067% 83.11% 91ms 0.61% VecTDot 91ms 0.61% 83.72% 91ms 0.61% [libm.so.6] 43ms 0.29% 84.01% 90ms 0.6% H5SL_search 82ms 0.55% 84.56% 89ms 0.6% AbstractParameterisedSystem::SetAnyVariable 0 0% 84.56% 89ms 0.6% VecTDot_Seq 1ms 0.0067% 84.57% 89ms 0.6% VecXDot_Seq_Private.constprop.0 1ms 0.0067% 84.57% 87ms 0.58% ompi_datatype_duplicate 86ms 0.58% 85.15% 86ms 0.58% asuint64 (inline) 3ms 0.02% 85.17% 84ms 0.56% opal_datatype_create_desc 83ms 0.56% 85.72% 83ms 0.56% H5VM_array_offset_pre 24ms 0.16% 85.89% 81ms 0.54% ompi_datatype_set_args 0 0% 85.89% 80ms 0.54% MPI_Type_create_hindexed 42ms 0.28% 86.17% 79ms 0.53% AbstractCardiacCell::GetVoltage (partial-inline) 37ms 0.25% 86.41% 78ms 0.52% TimeStepper::AdvanceOneTimeStep 12ms 0.08% 86.49% 77ms 0.52% opal_dss_print_buffer_contents 3ms 0.02% 86.51% 75ms 0.5% PMPI_Type_vector