File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 109448ms, 91.68% of 119385ms total Dropped 1118 nodes (cum <= 596.92ms) flat flat% sum% cum cum% 0 0% 0% 119364ms 100% __libc_start_call_main 0 0% 0% 119364ms 100% __libc_start_main_impl 0 0% 0% 119364ms 100% _start 0 0% 0% 119361ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 119361ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 119361ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 119361ms 100% main 0 0% 0% 119329ms 100% AbstractConvergenceTester::Converge 0 0% 0% 119329ms 100% CxxTest::RealTestDescription::run 0 0% 0% 119329ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 119329ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 119329ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 119329ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 6ms 0.005% 0.005% 118047ms 98.88% AbstractCardiacProblem::Solve 7ms 0.0059% 0.011% 117267ms 98.23% AbstractDynamicLinearPdeSolver::Solve 3ms 0.0025% 0.013% 65781ms 55.10% LinearSystem::Solve 0 0% 0.013% 65313ms 54.71% KSPSolve 12ms 0.01% 0.023% 65313ms 54.71% KSPSolve_Private 14ms 0.012% 0.035% 64934ms 54.39% KSPSolve_SYMMLQ 181ms 0.15% 0.19% 42739ms 35.80% AbstractCardiacTissue::SolveCellSystems 8ms 0.0067% 0.19% 36666ms 30.71% PCApply 5ms 0.0042% 0.2% 36648ms 30.70% PCApply_BJacobi_Singleblock 1ms 0.00084% 0.2% 34074ms 28.54% KSPSolve_PREONLY (partial-inline) 1398ms 1.17% 1.37% 32965ms 27.61% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 1ms 0.00084% 1.37% 32960ms 27.61% PCApply_ICC 5ms 0.0042% 1.37% 32959ms 27.61% MatSolve 32485ms 27.21% 28.58% 32954ms 27.60% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1ms 0.00084% 28.59% 31726ms 26.57% KSP_PCApply.lto_priv.18 7124ms 5.97% 34.55% 28560ms 23.92% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 7ms 0.0059% 34.56% 22040ms 18.46% MatMult 5ms 0.0042% 34.56% 22033ms 18.46% MatMult_SeqAIJ 21537ms 18.04% 52.60% 22033ms 18.46% MatMult_SeqAIJ_Inode (inline) 2037ms 1.71% 54.31% 14724ms 12.33% CardiacNewtonSolver::Solve 321ms 0.27% 54.58% 8946ms 7.49% AbstractCardiacTissue::UpdateCaches (inline) 4332ms 3.63% 58.21% 8560ms 7.17% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1941ms 1.63% 59.83% 8428ms 7.06% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1120ms 0.94% 60.77% 7683ms 6.44% BidomainSolver::SetupLinearSystem 1048ms 0.88% 61.65% 7293ms 6.11% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1ms 0.00084% 61.65% 7002ms 5.87% KSP_PCApply (partial-inline) 4ms 0.0034% 61.65% 6418ms 5.38% KSPConvergedDefault 5951ms 4.98% 66.64% 5951ms 4.98% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3923ms 3.29% 69.92% 3966ms 3.32% __ieee754_log_fma 0 0% 69.92% 3699ms 3.10% boost::numeric::ublas::norm_inf (inline) 2482ms 2.08% 72.00% 3699ms 3.10% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.00% 3699ms 3.10% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.00% 3699ms 3.10% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 6ms 0.005% 72.01% 3404ms 2.85% MatNullSpaceRemove 3206ms 2.69% 74.69% 3206ms 2.69% __memcpy_avx_unaligned_erms 0 0% 74.69% 3167ms 2.65% PetscMemcpy (inline) 22ms 0.018% 74.71% 3150ms 2.64% std::pow (inline) 402ms 0.34% 75.05% 3115ms 2.61% __pow 1722ms 1.44% 76.49% 2851ms 2.39% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2777ms 2.33% 78.82% 2777ms 2.33% ddot_ 28ms 0.023% 78.84% 2741ms 2.30% VecCopy 2ms 0.0017% 78.84% 2709ms 2.27% VecCopy_Seq (partial-inline) 378ms 0.32% 79.16% 2702ms 2.26% __ieee754_pow_fma 15ms 0.013% 79.17% 2517ms 2.11% VecAXPY 11ms 0.0092% 79.18% 2502ms 2.10% VecAXPY_Seq 2477ms 2.07% 81.25% 2477ms 2.07% daxpy_ 4ms 0.0034% 81.26% 2234ms 1.87% VecDot 0 0% 81.26% 2230ms 1.87% VecDot_Seq 3ms 0.0025% 81.26% 2230ms 1.87% VecXDot_Seq_Private.constprop.0 3ms 0.0025% 81.26% 2053ms 1.72% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 81.26% 1864ms 1.56% VecMDot 14ms 0.012% 81.27% 1864ms 1.56% VecMXDot_Private 1839ms 1.54% 82.82% 1848ms 1.55% VecMDot_Seq 35ms 0.029% 82.84% 1694ms 1.42% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1559ms 1.31% 84.15% 1614ms 1.35% exp_inline (inline) 10ms 0.0084% 84.16% 1534ms 1.28% VecMAXPY 1522ms 1.27% 85.43% 1524ms 1.28% VecMAXPY_Seq 1417ms 1.19% 86.62% 1417ms 1.19% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 0 0% 86.62% 1406ms 1.18% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.62% 1145ms 0.96% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 86.62% 1145ms 0.96% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 86.62% 1145ms 0.96% boost_numeric_ublas_abs (inline) 1145ms 0.96% 87.58% 1145ms 0.96% std::abs (inline) 1134ms 0.95% 88.53% 1134ms 0.95% __memset_avx2_unaligned_erms 0 0% 88.53% 1129ms 0.95% PetscMemzero (inline) 0 0% 88.53% 1127ms 0.94% CuboidMeshConstructor::Construct 0 0% 88.53% 1126ms 0.94% AbstractTetrahedralMesh::ConstructRegularSlabMesh 1ms 0.00084% 88.53% 1126ms 0.94% DistributedTetrahedralMesh::ConstructCuboid 7ms 0.0059% 88.54% 1106ms 0.93% boost::numeric::ublas::matrix_assign (inline) 221ms 0.19% 88.72% 1094ms 0.92% boost::numeric::ublas::indexing_matrix_assign 823ms 0.69% 89.41% 1076ms 0.9% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 89.41% 1036ms 0.87% Element::Element 6ms 0.005% 89.42% 1004ms 0.84% AbstractTetrahedralElement::CalculateJacobian 0 0% 89.42% 957ms 0.8% AbstractTetrahedralElement::AbstractTetrahedralElement 1ms 0.00084% 89.42% 918ms 0.77% VecDuplicate 7ms 0.0059% 89.42% 894ms 0.75% VecScale 4ms 0.0034% 89.43% 887ms 0.74% VecScale_Seq 881ms 0.74% 90.16% 881ms 0.74% dscal_ 8ms 0.0067% 90.17% 860ms 0.72% boost::numeric::ublas::c_matrix::c_matrix (inline) 9ms 0.0075% 90.18% 857ms 0.72% BidomainAssembler::ComputeMatrixTerm 854ms 0.72% 90.89% 854ms 0.72% [libchaste_heart.so] 3ms 0.0025% 90.90% 793ms 0.66% VecNorm 1ms 0.00084% 90.90% 783ms 0.66% VecNorm_Seq 9ms 0.0075% 90.90% 775ms 0.65% PetscMallocA 7ms 0.0059% 90.91% 766ms 0.64% PetscMallocAlign (partial-inline) 2ms 0.0017% 90.91% 740ms 0.62% AbstractBidomainSolver::FinaliseLinearSystem 236ms 0.2% 91.11% 736ms 0.62% AbstractBidomainSolver::CheckCompatibilityCondition 2ms 0.0017% 91.11% 716ms 0.6% BidomainProblem::WriteOneStep 675ms 0.57% 91.68% 675ms 0.57% log_inline (inline) 0 0% 91.68% 647ms 0.54% AbstractFeAssemblerInterface::Assemble (inline)