File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12876ms, 85.57% of 15048ms total Dropped 715 nodes (cum <= 75.24ms) flat flat% sum% cum cum% 0 0% 0% 15040ms 99.95% __libc_start_call_main 0 0% 0% 15040ms 99.95% __libc_start_main_impl 0 0% 0% 15040ms 99.95% _start 0 0% 0% 15037ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 15037ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 15037ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 15037ms 99.93% main 0 0% 0% 15003ms 99.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 15003ms 99.70% CxxTest::TestRunner::runTest (inline) 0 0% 0% 15003ms 99.70% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14981ms 99.55% AbstractCardiacProblem::Solve 5ms 0.033% 0.047% 11475ms 76.26% AbstractDynamicLinearPdeSolver::Solve 37ms 0.25% 0.29% 9392ms 62.41% AbstractCardiacTissue::SolveCellSystems 161ms 1.07% 1.36% 5764ms 38.30% AbstractCardiacCell::ComputeExceptVoltage 172ms 1.14% 2.51% 4905ms 32.60% AbstractOneStepIvpOdeSolver::InternalSolve 181ms 1.20% 3.71% 4178ms 27.76% EulerIvpOdeSolver::CalculateNextYValue 845ms 5.62% 9.32% 3932ms 26.13% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1674ms 11.12% 20.45% 3657ms 24.30% __GI___exp 1ms 0.0066% 20.45% 3436ms 22.83% MonodomainProblem::WriteOneStep 1ms 0.0066% 20.46% 3275ms 21.76% Hdf5DataWriter::PutVector 0 0% 20.46% 3252ms 21.61% H5Dwrite 1ms 0.0066% 20.47% 3230ms 21.46% H5D__write 81ms 0.54% 21.01% 2811ms 18.68% AbstractCardiacTissue::UpdateCaches (inline) 872ms 5.79% 26.80% 2680ms 17.81% CellLuoRudy1991FromCellML::GetIIonic 1761ms 11.70% 38.50% 1907ms 12.67% __ieee754_exp_fma 0 0% 38.50% 1777ms 11.81% H5D__chunk_collective_write 21ms 0.14% 38.64% 1777ms 11.81% H5F_set_coll_metadata_reads 15ms 0.1% 38.74% 1531ms 10.17% H5FD_s3comms_uriencode 0 0% 38.74% 1355ms 9.00% LinearSystem::Solve 15ms 0.1% 38.84% 1327ms 8.82% H5D__chunk_cacheable 0 0% 38.84% 1242ms 8.25% KSPSolve 2ms 0.013% 38.86% 1242ms 8.25% KSPSolve_Private 2ms 0.013% 38.87% 1236ms 8.21% KSPSolve_CG 484ms 3.22% 42.09% 1124ms 7.47% H5S_select_iterate 2ms 0.013% 42.10% 1071ms 7.12% H5F_block_write 1ms 0.0066% 42.11% 1069ms 7.10% H5PB_write 2ms 0.013% 42.12% 1068ms 7.10% H5F__accum_write 1ms 0.0066% 42.13% 1066ms 7.08% H5FD_write 49ms 0.33% 42.45% 1056ms 7.02% 1ms 0.0066% 42.46% 977ms 6.49% H5D__mpio_select_write 3ms 0.02% 42.48% 960ms 6.38% std::pow (inline) 99ms 0.66% 43.14% 957ms 6.36% __pow 1ms 0.0066% 43.14% 861ms 5.72% PMPI_File_write_at_all 134ms 0.89% 44.03% 856ms 5.69% __ieee754_pow_fma 829ms 5.51% 49.54% 831ms 5.52% __GI_pwritev64 1ms 0.0066% 49.55% 707ms 4.70% PCApply 0 0% 49.55% 707ms 4.70% PCApply_BJacobi_Singleblock 308ms 2.05% 51.59% 705ms 4.69% MonodomainSolver::SetupLinearSystem 0 0% 51.59% 675ms 4.49% KSPSolve_PREONLY 0 0% 51.59% 669ms 4.45% MatSolve 664ms 4.41% 56.01% 669ms 4.45% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 56.01% 669ms 4.45% PCApply_ICC 56ms 0.37% 56.38% 667ms 4.43% H5D__chunk_set_sizes 304ms 2.02% 58.40% 642ms 4.27% CellLuoRudy1991FromCellML::VerifyStateVariables 69ms 0.46% 58.86% 573ms 3.81% H5S_mpio_space_type 0 0% 58.86% 492ms 3.27% KSP_PCApply.lto_priv.7 2ms 0.013% 58.87% 470ms 3.12% MatMult 466ms 3.10% 61.97% 468ms 3.11% MatMult_SeqAIJ 404ms 2.68% 64.65% 404ms 2.68% log_inline (inline) 304ms 2.02% 66.67% 304ms 2.02% exp_inline (inline) 0 0% 66.67% 299ms 1.99% KSPConvergedDefault 126ms 0.84% 67.51% 248ms 1.65% TimeStepper::TimeStepper 60ms 0.4% 67.91% 233ms 1.55% __GI___libc_malloc 0 0% 67.91% 218ms 1.45% KSP_PCApply 11ms 0.073% 67.98% 213ms 1.42% ompi_datatype_create 21ms 0.14% 68.12% 211ms 1.40% H5VM_chunk_index 168ms 1.12% 69.24% 208ms 1.38% _int_malloc 124ms 0.82% 70.06% 196ms 1.30% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 195ms 1.30% 71.36% 195ms 1.30% [libchaste_heart.so] 132ms 0.88% 72.24% 182ms 1.21% AbstractOneStepIvpOdeSolver::Solve 43ms 0.29% 72.52% 178ms 1.18% __GI___libc_free 176ms 1.17% 73.69% 176ms 1.17% std::isinf (inline) 5ms 0.033% 73.72% 172ms 1.14% MPI_Type_free 9ms 0.06% 73.78% 172ms 1.14% ompi_datatype_destroy 153ms 1.02% 74.80% 171ms 1.14% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 1ms 0.0066% 74.81% 160ms 1.06% Hdf5DataWriter::PutUnlimitedVariable 90ms 0.6% 75.41% 157ms 1.04% top12 (inline) 153ms 1.02% 76.42% 153ms 1.02% ddot_ 43ms 0.29% 76.71% 150ms 1% ompi_datatype_release_args 5ms 0.033% 76.74% 150ms 1% ompi_info_register_framework_params 31ms 0.21% 76.95% 148ms 0.98% AbstractCardiacCell::SetVoltage (partial-inline) 15ms 0.1% 77.05% 136ms 0.9% H5S_set_version 134ms 0.89% 77.94% 134ms 0.89% TimeStepper::CalculateNextTime 45ms 0.3% 78.24% 133ms 0.88% _int_free 65ms 0.43% 78.67% 128ms 0.85% H5S_hyper_add_span_element 128ms 0.85% 79.52% 128ms 0.85% __ieee754_log_fma 6ms 0.04% 79.56% 127ms 0.84% PMPI_Type_create_resized 1ms 0.0066% 79.57% 125ms 0.83% PMPI_File_set_view 49ms 0.33% 79.89% 121ms 0.8% H5VM_array_calc 7ms 0.047% 79.94% 113ms 0.75% opal_datatype_create_desc 4ms 0.027% 79.96% 109ms 0.72% ompi_datatype_duplicate 84ms 0.56% 80.52% 106ms 0.7% AbstractParameterisedSystem::GetAnyVariable 0 0% 80.52% 105ms 0.7% VecDuplicate 2ms 0.013% 80.54% 105ms 0.7% VecDuplicate_MPI 100ms 0.66% 81.20% 104ms 0.69% AbstractParameterisedSystem::SetAnyVariable 41ms 0.27% 81.47% 104ms 0.69% __libc_calloc 2ms 0.013% 81.49% 103ms 0.68% VecNorm 37ms 0.25% 81.73% 99ms 0.66% AbstractCardiacCell::GetVoltage (partial-inline) 31ms 0.21% 81.94% 98ms 0.65% ompi_datatype_set_args 96ms 0.64% 82.58% 96ms 0.64% H5VM_array_offset_pre 96ms 0.64% 83.21% 96ms 0.64% H5VM_chunk_index_scaled 96ms 0.64% 83.85% 96ms 0.64% __memcpy_avx_unaligned_erms 2ms 0.013% 83.86% 92ms 0.61% VecNorm_Seq 6ms 0.04% 83.90% 91ms 0.6% MPI_Type_create_hindexed 45ms 0.3% 84.20% 89ms 0.59% std::__cxx11::basic_string::basic_string 51ms 0.34% 84.54% 83ms 0.55% TimeStepper::AdvanceOneTimeStep 0 0% 84.54% 81ms 0.54% VecTDot 3ms 0.02% 84.56% 80ms 0.53% MPI_Type_contiguous 4ms 0.027% 84.59% 79ms 0.52% H5D__chunk_allocated 5ms 0.033% 84.62% 79ms 0.52% PMPI_Type_vector 0 0% 84.62% 79ms 0.52% VecTDot_Seq 1ms 0.0066% 84.63% 79ms 0.52% VecXDot_Seq_Private.constprop.0 78ms 0.52% 85.15% 78ms 0.52% [libm.so.6] 31ms 0.21% 85.35% 77ms 0.51% H5S__hyper_rebuild 32ms 0.21% 85.57% 76ms 0.51% H5S_select_iter_next