File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 383ms, 85.49% of 448ms total Dropped 208 nodes (cum <= 2.24ms) flat flat% sum% cum cum% 0 0% 0% 440ms 98.21% __libc_start_call_main 0 0% 0% 440ms 98.21% __libc_start_main_impl 0 0% 0% 440ms 98.21% _start 0 0% 0% 437ms 97.54% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 437ms 97.54% CxxTest::TestRunner::runAllTests 0 0% 0% 437ms 97.54% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 437ms 97.54% main 0 0% 0% 397ms 88.62% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 397ms 88.62% CxxTest::TestRunner::runTest (inline) 0 0% 0% 396ms 88.39% CxxTest::RealTestDescription::run 0 0% 0% 396ms 88.39% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 396ms 88.39% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 392ms 87.50% AbstractCardiacProblem::Solve 0 0% 0% 389ms 86.83% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 350ms 78.12% KSPSolve 0 0% 0% 350ms 78.12% KSPSolve_Private 0 0% 0% 350ms 78.12% LinearSystem::Solve 1ms 0.22% 0.22% 348ms 77.68% KSPSolve_CG 0 0% 0.22% 209ms 46.65% KSP_PCApply.lto_priv.7 0 0% 0.22% 206ms 45.98% PCApply 0 0% 0.22% 206ms 45.98% PCApply_BJacobi_Singleblock 1ms 0.22% 0.45% 171ms 38.17% KSPSolve_PREONLY (partial-inline) 0 0% 0.45% 158ms 35.27% MatSolve 156ms 34.82% 35.27% 158ms 35.27% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 35.27% 158ms 35.27% PCApply_ICC 0 0% 35.27% 61ms 13.62% MatMult 2ms 0.45% 35.71% 61ms 13.62% MatMult_SeqAIJ (partial-inline) 58ms 12.95% 48.66% 61ms 13.62% MatMult_SeqAIJ_Inode (inline) 55ms 12.28% 60.94% 55ms 12.28% ddot_ 0 0% 60.94% 41ms 9.15% VecTDot 0 0% 60.94% 41ms 9.15% VecTDot_Seq 0 0% 60.94% 41ms 9.15% VecXDot_Seq_Private.constprop.0 0 0% 60.94% 36ms 8.04% CxxTest::RealWorldDescription::setUp 0 0% 60.94% 36ms 8.04% PetscInitialize 0 0% 60.94% 36ms 8.04% PetscSetup::setUpWorld 0 0% 60.94% 36ms 8.04% PetscSetupUtils::CommonSetup 0 0% 60.94% 36ms 8.04% PetscSetupUtils::InitialisePetsc 0 0% 60.94% 35ms 7.81% PMPI_Init_thread 0 0% 60.94% 35ms 7.81% ompi_mpi_init 0 0% 60.94% 32ms 7.14% AbstractCardiacTissue::SolveCellSystems 1ms 0.22% 61.16% 32ms 7.14% MatNullSpaceRemove 0 0% 61.16% 30ms 6.70% 0 0% 61.16% 23ms 5.13% orte_init 0 0% 61.16% 19ms 4.24% VecMDot 1ms 0.22% 61.38% 19ms 4.24% VecMXDot_Private 0 0% 61.38% 18ms 4.02% AbstractCardiacCell::ComputeExceptVoltage 17ms 3.79% 65.18% 18ms 4.02% VecMDot_Seq 0 0% 65.18% 16ms 3.57% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.22% 65.40% 15ms 3.35% EulerIvpOdeSolver::CalculateNextYValue 0 0% 65.40% 15ms 3.35% KSP_PCApply (partial-inline) 0 0% 65.40% 15ms 3.35% __GI__dl_catch_exception 0 0% 65.40% 15ms 3.35% _dl_catch_error 0 0% 65.40% 15ms 3.35% _dlerror_run 0 0% 65.40% 14ms 3.12% VecNorm 0 0% 65.40% 14ms 3.12% VecNorm_Seq 0 0% 65.40% 14ms 3.12% opal_stackframe_output 4ms 0.89% 66.29% 13ms 2.90% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 66.29% 13ms 2.90% hwloc_topology_load 0 0% 66.29% 13ms 2.90% mca_base_framework_open 0 0% 66.29% 12ms 2.68% VecMAXPY 11ms 2.46% 68.75% 12ms 2.68% VecMAXPY_Seq 0 0% 68.75% 12ms 2.68% hwloc_linux_get_tid_last_cpu_location 3ms 0.67% 69.42% 11ms 2.46% __GI___exp 0 0% 69.42% 11ms 2.46% ___dlopen 0 0% 69.42% 11ms 2.46% _dl_open 0 0% 69.42% 11ms 2.46% dl_open_worker 0 0% 69.42% 11ms 2.46% dl_open_worker_begin 0 0% 69.42% 11ms 2.46% dlopen_doit 0 0% 69.42% 11ms 2.46% dlopen_implementation (inline) 0 0% 69.42% 11ms 2.46% mca_base_framework_register 0 0% 69.42% 10ms 2.23% VecAXPY 0 0% 69.42% 10ms 2.23% VecAXPY_Seq 0 0% 69.42% 10ms 2.23% VecDuplicate 1ms 0.22% 69.64% 10ms 2.23% VecDuplicate_Seq 10ms 2.23% 71.88% 10ms 2.23% daxpy_ 0 0% 71.88% 10ms 2.23% mca_base_component_find 0 0% 71.88% 10ms 2.23% mca_base_component_repository_open 0 0% 71.88% 10ms 2.23% mca_base_framework_components_register 0 0% 71.88% 9ms 2.01% VecAYPX 9ms 2.01% 73.88% 9ms 2.01% VecAYPX_Seq 0 0% 73.88% 8ms 1.79% AbstractCardiacTissue::UpdateCaches (inline) 1ms 0.22% 74.11% 8ms 1.79% CellLuoRudy1991FromCellML::GetIIonic 8ms 1.79% 75.89% 8ms 1.79% __ieee754_exp_fma 0 0% 75.89% 8ms 1.79% _dl_lookup_symbol_x 5ms 1.12% 77.01% 8ms 1.79% do_lookup_x 0 0% 77.01% 7ms 1.56% _dl_init 0 0% 77.01% 7ms 1.56% _dl_start_user 0 0% 77.01% 7ms 1.56% call_init (inline) 0 0% 77.01% 6ms 1.34% PetscMemcpy (inline) 0 0% 77.01% 6ms 1.34% PetscMemzero (inline) 6ms 1.34% 78.35% 6ms 1.34% __memcpy_avx_unaligned_erms 6ms 1.34% 79.69% 6ms 1.34% __memset_avx2_unaligned_erms 0 0% 79.69% 6ms 1.34% _dl_open_relocate_one_object (inline) 0 0% 79.69% 6ms 1.34% _dl_relocate_object 1ms 0.22% 79.91% 5ms 1.12% BidomainSolver::SetupLinearSystem 3ms 0.67% 80.58% 5ms 1.12% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.22% 80.80% 5ms 1.12% VecCopy 0 0% 80.80% 5ms 1.12% VecCreate 2ms 0.45% 81.25% 5ms 1.12% _dl_fixup 1ms 0.22% 81.47% 5ms 1.12% _dl_map_object 0 0% 81.47% 5ms 1.12% _dl_runtime_resolve_xsavec 2ms 0.45% 81.92% 5ms 1.12% boost::serialization::singleton::get_instance 0 0% 81.92% 5ms 1.12% elf_dynamic_do_Rela (inline) 0 0% 81.92% 5ms 1.12% elf_machine_rela (inline) 0 0% 81.92% 5ms 1.12% opal_hwloc_base_get_topology 0 0% 81.92% 5ms 1.12% orte_ess_base_proc_binding 0 0% 81.92% 5ms 1.12% resolve_map (inline) 0 0% 81.92% 4ms 0.89% AbstractCardiacProblem::Initialise 0 0% 81.92% 4ms 0.89% CxxTest::RealWorldDescription::tearDown 0 0% 81.92% 4ms 0.89% KSPConvergedDefault 0 0% 81.92% 4ms 0.89% PetscFinalize 0 0% 81.92% 4ms 0.89% PetscSetup::tearDownWorld 0 0% 81.92% 4ms 0.89% PetscSetupUtils::CommonFinalize 0 0% 81.92% 4ms 0.89% VecCopy_Seq (partial-inline) 1ms 0.22% 82.14% 4ms 0.89% VecSetType 0 0% 82.14% 4ms 0.89% XOpenDisplay 0 0% 82.14% 4ms 0.89% [hwloc_gl.so] 1ms 0.22% 82.37% 4ms 0.89% [libxcb.so.1.1.0] 0 0% 82.37% 4ms 0.89% _XConnectXCB 1ms 0.22% 82.59% 4ms 0.89% __cxa_finalize 0 0% 82.59% 4ms 0.89% __dlclose 2ms 0.45% 83.04% 4ms 0.89% __pow 0 0% 83.04% 4ms 0.89% _dl_call_fini 0 0% 83.04% 4ms 0.89% _dl_close 1ms 0.22% 83.26% 4ms 0.89% _dl_close_worker (inline) 0 0% 83.26% 4ms 0.89% _dl_map_object_deps 0 0% 83.26% 4ms 0.89% mca_base_component_repository_release 0 0% 83.26% 4ms 0.89% mca_base_framework_components_open 0 0% 83.26% 4ms 0.89% ompi_mpi_finalize 0 0% 83.26% 4ms 0.89% openaux 0 0% 83.26% 4ms 0.89% std::pow (inline) 0 0% 83.26% 4ms 0.89% xcb_connect_to_display_with_auth_info 1ms 0.22% 83.48% 3ms 0.67% PetscHeaderCreate_Private 0 0% 83.48% 3ms 0.67% PetscMallocA 0 0% 83.48% 3ms 0.67% PetscMallocAlign (partial-inline) 0 0% 83.48% 3ms 0.67% ProgressReporter::Update 0 0% 83.48% 3ms 0.67% VecCreate_Seq 0 0% 83.48% 3ms 0.67% VecDestroy 0 0% 83.48% 3ms 0.67% VecSet 0 0% 83.48% 3ms 0.67% VecSet_Seq (partial-inline) 3ms 0.67% 84.15% 3ms 0.67% __GI___libc_read 3ms 0.67% 84.82% 3ms 0.67% __GI___libc_write 0 0% 84.82% 3ms 0.67% __GI_exit 0 0% 84.82% 3ms 0.67% __run_exit_handlers 0 0% 84.82% 3ms 0.67% _dl_fini 0 0% 84.82% 3ms 0.67% _dl_map_object_from_fd 0 0% 84.82% 3ms 0.67% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 1ms 0.22% 85.04% 3ms 0.67% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 2ms 0.45% 85.49% 3ms 0.67% check_match 0 0% 85.49% 3ms 0.67% mca_base_components_close 0 0% 85.49% 3ms 0.67% mca_base_framework_close 0 0% 85.49% 3ms 0.67% mca_topo_base_dist_graph_neighbors_count 0 0% 85.49% 3ms 0.67% std::ostream::flush 0 0% 85.49% 3ms 0.67% std::ostream::operator<< (inline)