File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 114087ms, 91.90% of 124147ms total Dropped 1108 nodes (cum <= 620.74ms) flat flat% sum% cum cum% 0 0% 0% 124130ms 100% __libc_start_call_main 0 0% 0% 124130ms 100% __libc_start_main_impl 0 0% 0% 124130ms 100% _start 0 0% 0% 124128ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 124128ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 124128ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 124128ms 100% main 0 0% 0% 124084ms 99.95% AbstractConvergenceTester::Converge 0 0% 0% 124084ms 99.95% CxxTest::RealTestDescription::run 0 0% 0% 124084ms 99.95% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 124084ms 99.95% CxxTest::TestRunner::runTest (inline) 0 0% 0% 124084ms 99.95% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 124084ms 99.95% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 5ms 0.004% 0.004% 122791ms 98.91% AbstractCardiacProblem::Solve 11ms 0.0089% 0.013% 121890ms 98.18% AbstractDynamicLinearPdeSolver::Solve 6ms 0.0048% 0.018% 69017ms 55.59% LinearSystem::Solve 2ms 0.0016% 0.019% 68398ms 55.09% KSPSolve 12ms 0.0097% 0.029% 68396ms 55.09% KSPSolve_Private 10ms 0.0081% 0.037% 67915ms 54.71% KSPSolve_SYMMLQ 219ms 0.18% 0.21% 43822ms 35.30% AbstractCardiacTissue::SolveCellSystems 3ms 0.0024% 0.22% 37867ms 30.50% PCApply 4ms 0.0032% 0.22% 37856ms 30.49% PCApply_BJacobi_Singleblock 0 0% 0.22% 34932ms 28.14% KSPSolve_PREONLY (partial-inline) 1497ms 1.21% 1.42% 33846ms 27.26% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 2ms 0.0016% 1.43% 33625ms 27.08% PCApply_ICC 9ms 0.0072% 1.43% 33623ms 27.08% MatSolve 33107ms 26.67% 28.10% 33614ms 27.08% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 4ms 0.0032% 28.10% 32700ms 26.34% KSP_PCApply.lto_priv.18 6835ms 5.51% 33.61% 29372ms 23.66% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 8ms 0.0064% 33.62% 23425ms 18.87% MatMult 269ms 0.22% 33.83% 23417ms 18.86% MatMult_SeqAIJ (partial-inline) 22930ms 18.47% 52.30% 23415ms 18.86% MatMult_SeqAIJ_Inode (inline) 1887ms 1.52% 53.82% 14877ms 11.98% CardiacNewtonSolver::Solve 364ms 0.29% 54.12% 9141ms 7.36% AbstractCardiacTissue::UpdateCaches (inline) 4602ms 3.71% 57.82% 8846ms 7.13% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 2032ms 1.64% 59.46% 8561ms 6.90% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1270ms 1.02% 60.48% 8247ms 6.64% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 1035ms 0.83% 61.32% 7948ms 6.40% BidomainSolver::SetupLinearSystem 0 0% 61.32% 7321ms 5.90% KSP_PCApply (partial-inline) 6720ms 5.41% 66.73% 6720ms 5.41% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 12ms 0.0097% 66.74% 6588ms 5.31% KSPConvergedDefault 3913ms 3.15% 69.89% 3949ms 3.18% __ieee754_log_fma 0 0% 69.89% 3754ms 3.02% boost::numeric::ublas::norm_inf (inline) 2523ms 2.03% 71.92% 3754ms 3.02% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 71.92% 3754ms 3.02% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 71.92% 3754ms 3.02% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 3735ms 3.01% 74.93% 3735ms 3.01% __memcpy_avx_unaligned_erms 0 0% 74.93% 3700ms 2.98% PetscMemcpy (inline) 7ms 0.0056% 74.94% 3600ms 2.90% MatNullSpaceRemove 25ms 0.02% 74.96% 3236ms 2.61% VecCopy 2ms 0.0016% 74.96% 3209ms 2.58% VecCopy_Seq (partial-inline) 32ms 0.026% 74.99% 3207ms 2.58% std::pow (inline) 383ms 0.31% 75.29% 3171ms 2.55% __pow 2860ms 2.30% 77.60% 2860ms 2.30% ddot_ 15ms 0.012% 77.61% 2833ms 2.28% VecAXPY 7ms 0.0056% 77.62% 2818ms 2.27% VecAXPY_Seq 1697ms 1.37% 78.98% 2799ms 2.25% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2787ms 2.24% 81.23% 2787ms 2.24% daxpy_ 385ms 0.31% 81.54% 2779ms 2.24% __ieee754_pow_fma 5ms 0.004% 81.54% 2403ms 1.94% VecDot 0 0% 81.54% 2398ms 1.93% VecDot_Seq 4ms 0.0032% 81.54% 2398ms 1.93% VecXDot_Seq_Private.constprop.0 1ms 0.00081% 81.55% 2102ms 1.69% VecMDot 16ms 0.013% 81.56% 2101ms 1.69% VecMXDot_Private 2ms 0.0016% 81.56% 2086ms 1.68% AbstractFeVolumeIntegralAssembler::DoAssemble 2081ms 1.68% 83.24% 2084ms 1.68% VecMDot_Seq 33ms 0.027% 83.26% 1720ms 1.39% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1572ms 1.27% 84.53% 1632ms 1.31% exp_inline (inline) 5ms 0.004% 84.53% 1491ms 1.20% VecMAXPY 1472ms 1.19% 85.72% 1486ms 1.20% VecMAXPY_Seq 1446ms 1.16% 86.88% 1446ms 1.16% __memset_avx2_unaligned_erms 0 0% 86.88% 1430ms 1.15% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.88% 1427ms 1.15% PetscMemzero (inline) 1420ms 1.14% 88.03% 1420ms 1.14% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 1ms 0.00081% 88.03% 1190ms 0.96% VecDuplicate 0 0% 88.03% 1142ms 0.92% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 88.03% 1142ms 0.92% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 88.03% 1142ms 0.92% boost_numeric_ublas_abs (inline) 1142ms 0.92% 88.95% 1142ms 0.92% std::abs (inline) 0 0% 88.95% 1125ms 0.91% CuboidMeshConstructor::Construct 0 0% 88.95% 1124ms 0.91% AbstractTetrahedralMesh::ConstructRegularSlabMesh 2ms 0.0016% 88.95% 1124ms 0.91% DistributedTetrahedralMesh::ConstructCuboid 6ms 0.0048% 88.95% 1093ms 0.88% boost::numeric::ublas::matrix_assign (inline) 224ms 0.18% 89.13% 1081ms 0.87% boost::numeric::ublas::indexing_matrix_assign 740ms 0.6% 89.73% 1018ms 0.82% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 1ms 0.00081% 89.73% 1018ms 0.82% Element::Element 7ms 0.0056% 89.74% 1001ms 0.81% AbstractTetrahedralElement::CalculateJacobian 14ms 0.011% 89.75% 987ms 0.8% PetscMallocA 2ms 0.0016% 89.75% 973ms 0.78% PetscMallocAlign (partial-inline) 1ms 0.00081% 89.75% 942ms 0.76% AbstractTetrahedralElement::AbstractTetrahedralElement 866ms 0.7% 90.45% 866ms 0.7% [libchaste_heart.so] 6ms 0.0048% 90.45% 859ms 0.69% BidomainAssembler::ComputeMatrixTerm 0 0% 90.45% 830ms 0.67% BidomainProblem::WriteOneStep 8ms 0.0064% 90.46% 814ms 0.66% VecScale 4ms 0.0032% 90.46% 806ms 0.65% VecScale_Seq 6ms 0.0048% 90.47% 803ms 0.65% boost::numeric::ublas::c_matrix::c_matrix (inline) 802ms 0.65% 91.11% 802ms 0.65% dscal_ 2ms 0.0016% 91.12% 772ms 0.62% VecNorm 2ms 0.0016% 91.12% 760ms 0.61% VecNorm_Seq 8ms 0.0064% 91.12% 759ms 0.61% VecDuplicate_Seq 0 0% 91.12% 745ms 0.6% AbstractBidomainSolver::FinaliseLinearSystem 241ms 0.19% 91.32% 744ms 0.6% AbstractBidomainSolver::CheckCompatibilityCondition 710ms 0.57% 91.89% 710ms 0.57% log_inline (inline) 9ms 0.0072% 91.90% 664ms 0.53% VecSetType 0 0% 91.90% 656ms 0.53% AbstractFeAssemblerInterface::Assemble (inline)