File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12837ms, 85.57% of 15002ms total Dropped 746 nodes (cum <= 75.01ms) flat flat% sum% cum cum% 0 0% 0% 14993ms 99.94% __libc_start_call_main 0 0% 0% 14993ms 99.94% __libc_start_main_impl 0 0% 0% 14993ms 99.94% _start 0 0% 0% 14990ms 99.92% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14990ms 99.92% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14990ms 99.92% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14990ms 99.92% main 0 0% 0% 14952ms 99.67% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14952ms 99.67% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14952ms 99.67% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 2ms 0.013% 0.013% 14929ms 99.51% AbstractCardiacProblem::Solve 1ms 0.0067% 0.02% 11333ms 75.54% AbstractDynamicLinearPdeSolver::Solve 30ms 0.2% 0.22% 9273ms 61.81% AbstractCardiacTissue::SolveCellSystems 128ms 0.85% 1.07% 5658ms 37.71% AbstractCardiacCell::ComputeExceptVoltage 189ms 1.26% 2.33% 4913ms 32.75% AbstractOneStepIvpOdeSolver::InternalSolve 203ms 1.35% 3.69% 4183ms 27.88% EulerIvpOdeSolver::CalculateNextYValue 872ms 5.81% 9.50% 3911ms 26.07% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1752ms 11.68% 21.18% 3660ms 24.40% __GI___exp 0 0% 21.18% 3520ms 23.46% MonodomainProblem::WriteOneStep 0 0% 21.18% 3347ms 22.31% Hdf5DataWriter::PutVector 2ms 0.013% 21.19% 3334ms 22.22% H5Dwrite 1ms 0.0067% 21.20% 3288ms 21.92% H5D__write 92ms 0.61% 21.81% 2723ms 18.15% AbstractCardiacTissue::UpdateCaches (inline) 799ms 5.33% 27.14% 2582ms 17.21% CellLuoRudy1991FromCellML::GetIIonic 1677ms 11.18% 38.31% 1835ms 12.23% __ieee754_exp_fma 2ms 0.013% 38.33% 1719ms 11.46% H5D__chunk_collective_write 23ms 0.15% 38.48% 1717ms 11.45% H5F_set_coll_metadata_reads 16ms 0.11% 38.59% 1495ms 9.97% H5FD_s3comms_uriencode 9ms 0.06% 38.65% 1447ms 9.65% H5D__chunk_cacheable 0 0% 38.65% 1360ms 9.07% LinearSystem::Solve 498ms 3.32% 41.97% 1263ms 8.42% H5S_select_iterate 0 0% 41.97% 1239ms 8.26% KSPSolve 2ms 0.013% 41.98% 1239ms 8.26% KSPSolve_Private 5ms 0.033% 42.01% 1229ms 8.19% KSPSolve_CG 54ms 0.36% 42.37% 1091ms 7.27% 3ms 0.02% 42.39% 1084ms 7.23% H5F_block_write 1ms 0.0067% 42.40% 1081ms 7.21% H5PB_write 1ms 0.0067% 42.41% 1080ms 7.20% H5FD_write 0 0% 42.41% 1080ms 7.20% H5F__accum_write 1ms 0.0067% 42.41% 991ms 6.61% H5D__mpio_select_write 7ms 0.047% 42.46% 937ms 6.25% std::pow (inline) 94ms 0.63% 43.09% 929ms 6.19% __pow 0 0% 43.09% 907ms 6.05% PMPI_File_write_at_all 872ms 5.81% 48.90% 877ms 5.85% __GI_pwritev64 104ms 0.69% 49.59% 833ms 5.55% __ieee754_pow_fma 93ms 0.62% 50.21% 785ms 5.23% H5D__chunk_set_sizes 368ms 2.45% 52.67% 710ms 4.73% CellLuoRudy1991FromCellML::VerifyStateVariables 290ms 1.93% 54.60% 677ms 4.51% MonodomainSolver::SetupLinearSystem 1ms 0.0067% 54.61% 653ms 4.35% PCApply 0 0% 54.61% 647ms 4.31% PCApply_BJacobi_Singleblock 2ms 0.013% 54.62% 622ms 4.15% KSPSolve_PREONLY 1ms 0.0067% 54.63% 614ms 4.09% PCApply_ICC 1ms 0.0067% 54.63% 613ms 4.09% MatSolve 599ms 3.99% 58.63% 612ms 4.08% MatSolve_SeqSBAIJ_1_NaturalOrdering 2ms 0.013% 58.64% 566ms 3.77% MatMult 563ms 3.75% 62.39% 564ms 3.76% MatMult_SeqAIJ 54ms 0.36% 62.75% 501ms 3.34% H5S_mpio_space_type 1ms 0.0067% 62.76% 466ms 3.11% KSP_PCApply.lto_priv.7 397ms 2.65% 65.40% 397ms 2.65% log_inline (inline) 290ms 1.93% 67.34% 292ms 1.95% exp_inline (inline) 1ms 0.0067% 67.34% 254ms 1.69% KSPConvergedDefault 117ms 0.78% 68.12% 242ms 1.61% TimeStepper::TimeStepper 25ms 0.17% 68.29% 234ms 1.56% H5VM_chunk_index 52ms 0.35% 68.64% 203ms 1.35% __GI___libc_malloc 120ms 0.8% 69.44% 197ms 1.31% top12 (inline) 0 0% 69.44% 190ms 1.27% KSP_PCApply 157ms 1.05% 70.48% 189ms 1.26% _int_malloc 8ms 0.053% 70.54% 188ms 1.25% ompi_datatype_create 177ms 1.18% 71.72% 177ms 1.18% [libchaste_heart.so] 103ms 0.69% 72.40% 176ms 1.17% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 176ms 1.17% 73.58% 176ms 1.17% std::isinf (inline) 1ms 0.0067% 73.58% 173ms 1.15% Hdf5DataWriter::PutUnlimitedVariable 29ms 0.19% 73.78% 169ms 1.13% AbstractCardiacCell::SetVoltage (partial-inline) 128ms 0.85% 74.63% 164ms 1.09% AbstractOneStepIvpOdeSolver::Solve 32ms 0.21% 74.84% 162ms 1.08% __GI___libc_free 23ms 0.15% 75.00% 158ms 1.05% H5S_set_version 6ms 0.04% 75.04% 156ms 1.04% MPI_Type_free 130ms 0.87% 75.90% 155ms 1.03% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 8ms 0.053% 75.96% 152ms 1.01% ompi_datatype_destroy 142ms 0.95% 76.90% 142ms 0.95% ddot_ 52ms 0.35% 77.25% 135ms 0.9% H5VM_array_calc 32ms 0.21% 77.46% 134ms 0.89% ompi_datatype_release_args 8ms 0.053% 77.52% 134ms 0.89% ompi_info_register_framework_params 70ms 0.47% 77.98% 131ms 0.87% H5S_hyper_add_span_element 47ms 0.31% 78.30% 130ms 0.87% _int_free 129ms 0.86% 79.16% 129ms 0.86% TimeStepper::CalculateNextTime 4ms 0.027% 79.18% 122ms 0.81% PMPI_Type_create_resized 110ms 0.73% 79.92% 119ms 0.79% AbstractParameterisedSystem::SetAnyVariable 119ms 0.79% 80.71% 119ms 0.79% __memcpy_avx_unaligned_erms 113ms 0.75% 81.46% 113ms 0.75% H5VM_chunk_index_scaled 39ms 0.26% 81.72% 110ms 0.73% H5S_select_iter_next 0 0% 81.72% 108ms 0.72% ompi_datatype_duplicate 2ms 0.013% 81.74% 104ms 0.69% PMPI_File_set_view 103ms 0.69% 82.42% 103ms 0.69% __ieee754_log_fma 1ms 0.0067% 82.43% 102ms 0.68% VecNorm 97ms 0.65% 83.08% 97ms 0.65% H5VM_array_offset_pre 0 0% 83.08% 97ms 0.65% VecDuplicate 8ms 0.053% 83.13% 97ms 0.65% VecDuplicate_MPI 3ms 0.02% 83.15% 97ms 0.65% VecNorm_Seq 29ms 0.19% 83.34% 92ms 0.61% std::__cxx11::basic_string::basic_string 32ms 0.21% 83.56% 89ms 0.59% __libc_calloc 1ms 0.0067% 83.56% 87ms 0.58% opal_datatype_create_desc 4ms 0.027% 83.59% 84ms 0.56% MPI_Type_contiguous 1ms 0.0067% 83.60% 82ms 0.55% VecTDot 0 0% 83.60% 81ms 0.54% VecTDot_Seq 2ms 0.013% 83.61% 81ms 0.54% VecXDot_Seq_Private.constprop.0 41ms 0.27% 83.88% 80ms 0.53% H5SL_search 41ms 0.27% 84.16% 80ms 0.53% TimeStepper::AdvanceOneTimeStep 80ms 0.53% 84.69% 80ms 0.53% asuint64 (inline) 2ms 0.013% 84.70% 79ms 0.53% H5D__chunk_allocated 18ms 0.12% 84.82% 78ms 0.52% H5S__hyper_rebuild 31ms 0.21% 85.03% 78ms 0.52% ompi_datatype_set_args 78ms 0.52% 85.55% 78ms 0.52% std::vector::operator[] (inline) 0 0% 85.55% 77ms 0.51% H5Pcreate 3ms 0.02% 85.57% 77ms 0.51% MPI_Type_create_hindexed