File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 342ms, 90.24% of 379ms total Dropped 142 nodes (cum <= 1.90ms) flat flat% sum% cum cum% 0 0% 0% 372ms 98.15% __libc_start_call_main 0 0% 0% 372ms 98.15% __libc_start_main_impl 0 0% 0% 372ms 98.15% _start 0 0% 0% 369ms 97.36% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 369ms 97.36% CxxTest::TestRunner::runAllTests 0 0% 0% 369ms 97.36% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 369ms 97.36% main 0 0% 0% 332ms 87.60% CxxTest::RealTestDescription::run 0 0% 0% 332ms 87.60% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 332ms 87.60% CxxTest::TestRunner::runTest (inline) 0 0% 0% 332ms 87.60% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 332ms 87.60% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 328ms 86.54% AbstractCardiacProblem::Solve 0 0% 0% 327ms 86.28% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 287ms 75.73% LinearSystem::Solve 0 0% 0% 286ms 75.46% KSPSolve 0 0% 0% 286ms 75.46% KSPSolve_CG 1ms 0.26% 0.26% 286ms 75.46% KSPSolve_Private 0 0% 0.26% 186ms 49.08% KSP_PCApply.lto_priv.7 0 0% 0.26% 176ms 46.44% PCApply 0 0% 0.26% 174ms 45.91% PCApply_BJacobi_Singleblock 0 0% 0.26% 144ms 37.99% KSPSolve_PREONLY (partial-inline) 1ms 0.26% 0.53% 139ms 36.68% PCApply_ICC 1ms 0.26% 0.79% 138ms 36.41% MatSolve 134ms 35.36% 36.15% 137ms 36.15% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 36.15% 49ms 12.93% MatMult 2ms 0.53% 36.68% 49ms 12.93% MatMult_SeqAIJ (partial-inline) 47ms 12.40% 49.08% 49ms 12.93% MatMult_SeqAIJ_Inode (inline) 0 0% 49.08% 35ms 9.23% AbstractCardiacTissue::SolveCellSystems 0 0% 49.08% 34ms 8.97% CxxTest::RealWorldDescription::setUp 0 0% 49.08% 34ms 8.97% PMPI_Init_thread 0 0% 49.08% 34ms 8.97% PetscInitialize 0 0% 49.08% 34ms 8.97% PetscSetup::setUpWorld 0 0% 49.08% 34ms 8.97% PetscSetupUtils::CommonSetup 0 0% 49.08% 34ms 8.97% PetscSetupUtils::InitialisePetsc 0 0% 49.08% 34ms 8.97% ompi_mpi_init 4ms 1.06% 50.13% 29ms 7.65% 28ms 7.39% 57.52% 28ms 7.39% ddot_ 0 0% 57.52% 26ms 6.86% MatNullSpaceRemove 0 0% 57.52% 23ms 6.07% orte_init 0 0% 57.52% 19ms 5.01% VecTDot 0 0% 57.52% 19ms 5.01% VecTDot_Seq 0 0% 57.52% 19ms 5.01% VecXDot_Seq_Private.constprop.0 0 0% 57.52% 17ms 4.49% AbstractCardiacCell::ComputeExceptVoltage 0 0% 57.52% 15ms 3.96% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 57.52% 14ms 3.69% AbstractCardiacTissue::UpdateCaches (inline) 7ms 1.85% 59.37% 14ms 3.69% CellLuoRudy1991FromCellML::GetIIonic 0 0% 59.37% 14ms 3.69% VecAYPX 14ms 3.69% 63.06% 14ms 3.69% VecAYPX_Seq 0 0% 63.06% 14ms 3.69% hwloc_topology_load 3ms 0.79% 63.85% 13ms 3.43% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 63.85% 13ms 3.43% EulerIvpOdeSolver::CalculateNextYValue 1ms 0.26% 64.12% 13ms 3.43% VecMAXPY 0 0% 64.12% 13ms 3.43% VecMDot 13ms 3.43% 67.55% 13ms 3.43% VecMDot_Seq 0 0% 67.55% 13ms 3.43% VecMXDot_Private 0 0% 67.55% 13ms 3.43% __GI__dl_catch_exception 0 0% 67.55% 13ms 3.43% _dl_catch_error 0 0% 67.55% 13ms 3.43% _dlerror_run 0 0% 67.55% 13ms 3.43% hwloc_linux_get_tid_last_cpu_location 0 0% 67.55% 13ms 3.43% mca_base_framework_open 11ms 2.90% 70.45% 12ms 3.17% VecMAXPY_Seq 5ms 1.32% 71.77% 12ms 3.17% __GI___exp 0 0% 71.77% 12ms 3.17% opal_stackframe_output 0 0% 71.77% 11ms 2.90% mca_base_framework_components_register 0 0% 71.77% 11ms 2.90% mca_base_framework_register 0 0% 71.77% 10ms 2.64% ___dlopen 0 0% 71.77% 10ms 2.64% _dl_open 0 0% 71.77% 10ms 2.64% dl_open_worker 0 0% 71.77% 10ms 2.64% dlopen_doit 0 0% 71.77% 10ms 2.64% dlopen_implementation (inline) 0 0% 71.77% 9ms 2.37% VecAXPY 0 0% 71.77% 9ms 2.37% VecAXPY_Seq 0 0% 71.77% 9ms 2.37% VecNorm 0 0% 71.77% 9ms 2.37% VecNorm_Seq 0 0% 71.77% 9ms 2.37% _dl_init 0 0% 71.77% 9ms 2.37% call_init (inline) 9ms 2.37% 74.14% 9ms 2.37% daxpy_ 0 0% 74.14% 9ms 2.37% mca_base_component_find 0 0% 74.14% 9ms 2.37% mca_base_component_repository_open 0 0% 74.14% 8ms 2.11% VecDuplicate 0 0% 74.14% 8ms 2.11% VecDuplicate_Seq 0 0% 74.14% 8ms 2.11% dl_open_worker_begin 7ms 1.85% 75.99% 7ms 1.85% __GI___libc_read 0 0% 75.99% 7ms 1.85% _dl_start_user 0 0% 75.99% 6ms 1.58% PetscMemcpy (inline) 0 0% 75.99% 6ms 1.58% VecCreate_Seq 2ms 0.53% 76.52% 6ms 1.58% VecCreate_Seq_Private (partial-inline) 0 0% 76.52% 6ms 1.58% VecDestroy 0 0% 76.52% 6ms 1.58% VecSetType 6ms 1.58% 78.10% 6ms 1.58% __ieee754_exp_fma 0 0% 78.10% 6ms 1.58% _dl_lookup_symbol_x 2ms 0.53% 78.63% 6ms 1.58% boost::serialization::singleton::get_instance 6ms 1.58% 80.21% 6ms 1.58% do_lookup_x 0 0% 80.21% 6ms 1.58% mca_base_framework_components_open 0 0% 80.21% 6ms 1.58% orte_ess_base_proc_binding 2ms 0.53% 80.74% 5ms 1.32% BidomainSolver::SetupLinearSystem 0 0% 80.74% 5ms 1.32% KSP_PCApply (inline) 0 0% 80.74% 5ms 1.32% PetscHeaderDestroy_Private 2ms 0.53% 81.27% 5ms 1.32% PetscMallocA 5ms 1.32% 82.59% 5ms 1.32% __memcpy_avx512_unaligned_erms 0 0% 82.59% 5ms 1.32% mca_topo_base_dist_graph_neighbors_count 0 0% 82.59% 5ms 1.32% opal_hwloc_base_get_topology 2ms 0.53% 83.11% 4ms 1.06% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.26% 83.38% 4ms 1.06% __cxa_finalize 2ms 0.53% 83.91% 4ms 1.06% __ieee754_pow_fma 0 0% 83.91% 4ms 1.06% __pow 0 0% 83.91% 4ms 1.06% _dl_call_fini 0 0% 83.91% 4ms 1.06% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 83.91% 4ms 1.06% std::pow (inline) 0 0% 83.91% 3ms 0.79% AbstractCardiacProblem::Initialise 0 0% 83.91% 3ms 0.79% CxxTest::RealWorldDescription::tearDown 0 0% 83.91% 3ms 0.79% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 83.91% 3ms 0.79% PetscFinalize 0 0% 83.91% 3ms 0.79% PetscLogObjDestroyDefault 1ms 0.26% 84.17% 3ms 0.79% PetscMallocAlign 0 0% 84.17% 3ms 0.79% PetscSetup::tearDownWorld 0 0% 84.17% 3ms 0.79% PetscSetupUtils::CommonFinalize 1ms 0.26% 84.43% 3ms 0.79% __GI___libc_free 0 0% 84.43% 3ms 0.79% __GI_exit 0 0% 84.43% 3ms 0.79% __dlclose 3ms 0.79% 85.22% 3ms 0.79% __libc_openat64 0 0% 85.22% 3ms 0.79% __run_exit_handlers 3ms 0.79% 86.02% 3ms 0.79% __strcmp_evex 0 0% 86.02% 3ms 0.79% _dl_close 1ms 0.26% 86.28% 3ms 0.79% _dl_close_worker (inline) 0 0% 86.28% 3ms 0.79% _dl_fini 0 0% 86.28% 3ms 0.79% _dl_fixup 0 0% 86.28% 3ms 0.79% _dl_map_object 0 0% 86.28% 3ms 0.79% _dl_map_object_deps 0 0% 86.28% 3ms 0.79% _dl_open_relocate_one_object (inline) 0 0% 86.28% 3ms 0.79% _dl_relocate_object 0 0% 86.28% 3ms 0.79% _dl_runtime_resolve_xsavec 0 0% 86.28% 3ms 0.79% boost::serialization::detail::singleton_wrapper::~singleton_wrapper 0 0% 86.28% 3ms 0.79% boost::serialization::typeid_system::extended_type_info_typeid_0::is_equal 0 0% 86.28% 3ms 0.79% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 86.28% 3ms 0.79% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 86.28% 3ms 0.79% elf_dynamic_do_Rela (inline) 0 0% 86.28% 3ms 0.79% elf_machine_rela (inline) 0 0% 86.28% 3ms 0.79% mca_base_component_repository_release 0 0% 86.28% 3ms 0.79% ompi_mpi_finalize 0 0% 86.28% 3ms 0.79% resolve_map (inline) 0 0% 86.28% 2ms 0.53% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 86.28% 2ms 0.53% AbstractFeVolumeIntegralAssembler::AssembleOnElement 0 0% 86.28% 2ms 0.53% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 86.28% 2ms 0.53% PCSetUp 0 0% 86.28% 2ms 0.53% PMPI_Comm_get_attr 1ms 0.26% 86.54% 2ms 0.53% PetscFreeAlign 1ms 0.26% 86.81% 2ms 0.53% PetscInfo_Private 1ms 0.26% 87.07% 2ms 0.53% PetscStageLogGetCurrent 0 0% 87.07% 2ms 0.53% VecCopy 0 0% 87.07% 2ms 0.53% VecCopy_Seq (partial-inline) 0 0% 87.07% 2ms 0.53% VecCreate 0 0% 87.07% 2ms 0.53% [hwloc_pci.so] 1ms 0.26% 87.34% 2ms 0.53% [libpciaccess.so.0.11.1] 0 0% 87.34% 2ms 0.53% _GLOBAL__sub_I_ChasteParameters_3_4.cpp 2ms 0.53% 87.86% 2ms 0.53% __GI___clock_nanosleep 0 0% 87.86% 2ms 0.53% __GI___libc_malloc 0 0% 87.86% 2ms 0.53% __GI___nanosleep 0 0% 87.86% 2ms 0.53% __posix_memalign 0 0% 87.86% 2ms 0.53% _dl_map_object_from_fd 2ms 0.53% 88.39% 2ms 0.53% _int_free 1ms 0.26% 88.65% 2ms 0.53% _int_malloc 0 0% 88.65% 2ms 0.53% boost::archive::detail::basic_serializer_map::erase 0 0% 88.65% 2ms 0.53% boost::archive::detail::pointer_oserializer::~pointer_oserializer (inline) 2ms 0.53% 89.18% 2ms 0.53% log_inline (inline) 0 0% 89.18% 2ms 0.53% mca_base_component_var_register 0 0% 89.18% 2ms 0.53% mca_base_var_group_register 0 0% 89.18% 2ms 0.53% mca_base_var_register 0 0% 89.18% 2ms 0.53% ompi_attr_get_c 0 0% 89.18% 2ms 0.53% pci_get_strings 2ms 0.53% 89.71% 2ms 0.53% std::_Rb_tree_increment 2ms 0.53% 90.24% 2ms 0.53% std::__cxx11::basic_string::basic_string 0 0% 90.24% 2ms 0.53% usleep