File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 350ms, 86.21% of 406ms total Dropped 232 nodes (cum <= 2.03ms) flat flat% sum% cum cum% 0 0% 0% 398ms 98.03% __libc_start_call_main 0 0% 0% 398ms 98.03% __libc_start_main_impl 0 0% 0% 398ms 98.03% _start 0 0% 0% 396ms 97.54% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 396ms 97.54% CxxTest::TestRunner::runAllTests 0 0% 0% 396ms 97.54% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 396ms 97.54% main 0 0% 0% 364ms 89.66% CxxTest::RealTestDescription::run 0 0% 0% 364ms 89.66% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 364ms 89.66% CxxTest::TestRunner::runTest (inline) 0 0% 0% 364ms 89.66% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 364ms 89.66% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 359ms 88.42% AbstractCardiacProblem::Solve 0 0% 0% 358ms 88.18% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 319ms 78.57% LinearSystem::Solve 0 0% 0% 317ms 78.08% KSPSolve 0 0% 0% 317ms 78.08% KSPSolve_Private 1ms 0.25% 0.25% 316ms 77.83% KSPSolve_CG 0 0% 0.25% 169ms 41.63% KSP_PCApply.lto_priv.7 0 0% 0.25% 164ms 40.39% PCApply 0 0% 0.25% 163ms 40.15% PCApply_BJacobi_Singleblock 0 0% 0.25% 133ms 32.76% KSPSolve_PREONLY (partial-inline) 0 0% 0.25% 122ms 30.05% MatSolve 122ms 30.05% 30.30% 122ms 30.05% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 30.30% 122ms 30.05% PCApply_ICC 0 0% 30.30% 68ms 16.75% MatMult 1ms 0.25% 30.54% 68ms 16.75% MatMult_SeqAIJ (partial-inline) 66ms 16.26% 46.80% 68ms 16.75% MatMult_SeqAIJ_Inode (inline) 60ms 14.78% 61.58% 60ms 14.78% ddot_ 0 0% 61.58% 46ms 11.33% VecTDot 1ms 0.25% 61.82% 46ms 11.33% VecTDot_Seq 0 0% 61.82% 45ms 11.08% VecXDot_Seq_Private.constprop.0 0 0% 61.82% 35ms 8.62% AbstractCardiacTissue::SolveCellSystems 1ms 0.25% 62.07% 32ms 7.88% MatNullSpaceRemove 0 0% 62.07% 29ms 7.14% CxxTest::RealWorldDescription::setUp 0 0% 62.07% 29ms 7.14% PetscInitialize 0 0% 62.07% 29ms 7.14% PetscSetup::setUpWorld 0 0% 62.07% 29ms 7.14% PetscSetupUtils::CommonSetup 0 0% 62.07% 29ms 7.14% PetscSetupUtils::InitialisePetsc 0 0% 62.07% 28ms 6.90% PMPI_Init_thread 0 0% 62.07% 28ms 6.90% ompi_mpi_init 0 0% 62.07% 24ms 5.91% 0 0% 62.07% 22ms 5.42% AbstractCardiacCell::ComputeExceptVoltage 0 0% 62.07% 20ms 4.93% AbstractOneStepIvpOdeSolver::InternalSolve 4ms 0.99% 63.05% 18ms 4.43% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 63.05% 18ms 4.43% EulerIvpOdeSolver::CalculateNextYValue 0 0% 63.05% 17ms 4.19% VecMDot 17ms 4.19% 67.24% 17ms 4.19% VecMDot_Seq 0 0% 67.24% 17ms 4.19% VecMXDot_Private 0 0% 67.24% 17ms 4.19% orte_init 0 0% 67.24% 16ms 3.94% VecNorm 0 0% 67.24% 16ms 3.94% VecNorm_Seq 0 0% 67.24% 14ms 3.45% VecMAXPY 13ms 3.20% 70.44% 14ms 3.45% VecMAXPY_Seq 2ms 0.49% 70.94% 14ms 3.45% __GI___exp 0 0% 70.94% 14ms 3.45% mca_base_framework_components_register 0 0% 70.94% 14ms 3.45% mca_base_framework_open 0 0% 70.94% 14ms 3.45% mca_base_framework_register 0 0% 70.94% 13ms 3.20% __GI__dl_catch_exception 0 0% 70.94% 13ms 3.20% _dl_catch_error 0 0% 70.94% 13ms 3.20% _dlerror_run 0 0% 70.94% 13ms 3.20% opal_stackframe_output 0 0% 70.94% 12ms 2.96% KSP_PCApply (partial-inline) 0 0% 70.94% 11ms 2.71% ___dlopen 0 0% 70.94% 11ms 2.71% _dl_open 0 0% 70.94% 11ms 2.71% dlopen_doit 0 0% 70.94% 11ms 2.71% dlopen_implementation (inline) 0 0% 70.94% 11ms 2.71% mca_base_component_find 0 0% 70.94% 11ms 2.71% mca_base_component_repository_open 1ms 0.25% 71.18% 10ms 2.46% VecAXPY 0 0% 71.18% 10ms 2.46% _dl_init 0 0% 71.18% 10ms 2.46% call_init (inline) 0 0% 71.18% 10ms 2.46% dl_open_worker 0 0% 71.18% 9ms 2.22% VecAXPY_Seq 9ms 2.22% 73.40% 9ms 2.22% __ieee754_exp_fma 0 0% 73.40% 9ms 2.22% _dl_lookup_symbol_x 9ms 2.22% 75.62% 9ms 2.22% daxpy_ 7ms 1.72% 77.34% 8ms 1.97% do_lookup_x 0 0% 77.34% 8ms 1.97% hwloc_topology_load 0 0% 77.34% 7ms 1.72% AbstractCardiacTissue::UpdateCaches (inline) 2ms 0.49% 77.83% 7ms 1.72% CellLuoRudy1991FromCellML::GetIIonic 0 0% 77.83% 7ms 1.72% VecDuplicate 1ms 0.25% 78.08% 7ms 1.72% _dl_runtime_resolve_xsavec 0 0% 78.08% 7ms 1.72% _dl_start_user 0 0% 78.08% 7ms 1.72% dl_open_worker_begin 0 0% 78.08% 7ms 1.72% hwloc_linux_get_tid_last_cpu_location 0 0% 78.08% 6ms 1.48% VecAYPX 6ms 1.48% 79.56% 6ms 1.48% VecAYPX_Seq 0 0% 79.56% 6ms 1.48% VecDuplicate_Seq 1ms 0.25% 79.80% 6ms 1.48% _dl_fixup 2ms 0.49% 80.30% 5ms 1.23% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 80.30% 5ms 1.23% VecDestroy 1ms 0.25% 80.54% 5ms 1.23% boost::serialization::singleton::get_instance 0 0% 80.54% 5ms 1.23% mca_base_framework_components_open 0 0% 80.54% 5ms 1.23% mca_topo_base_dist_graph_neighbors_count 0 0% 80.54% 4ms 0.99% AbstractCardiacProblem::Initialise 0 0% 80.54% 4ms 0.99% PetscMallocA 1ms 0.25% 80.79% 4ms 0.99% PetscMallocAlign 0 0% 80.79% 4ms 0.99% _dl_open_relocate_one_object (inline) 0 0% 80.79% 4ms 0.99% _dl_relocate_object 0 0% 80.79% 4ms 0.99% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 80.79% 4ms 0.99% elf_dynamic_do_Rela (inline) 0 0% 80.79% 4ms 0.99% elf_machine_rela (inline) 0 0% 80.79% 4ms 0.99% mca_base_var_group_register 0 0% 80.79% 4ms 0.99% mca_base_var_register 0 0% 80.79% 4ms 0.99% resolve_map (inline) 0 0% 80.79% 3ms 0.74% BidomainSolver::SetupLinearSystem 0 0% 80.79% 3ms 0.74% CxxTest::RealWorldDescription::tearDown 0 0% 80.79% 3ms 0.74% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 80.79% 3ms 0.74% PetscFinalize 0 0% 80.79% 3ms 0.74% PetscSetup::tearDownWorld 0 0% 80.79% 3ms 0.74% PetscSetupUtils::CommonFinalize 0 0% 80.79% 3ms 0.74% VecCreate 0 0% 80.79% 3ms 0.74% VecCreate_Seq 0 0% 80.79% 3ms 0.74% VecSetType 3ms 0.74% 81.53% 3ms 0.74% [libchaste_heart.so] 3ms 0.74% 82.27% 3ms 0.74% [libm.so.6] 3ms 0.74% 83.00% 3ms 0.74% __GI___clock_nanosleep 0 0% 83.00% 3ms 0.74% __GI___libc_free 2ms 0.49% 83.50% 3ms 0.74% __GI___libc_malloc 3ms 0.74% 84.24% 3ms 0.74% __GI___libc_read 0 0% 84.24% 3ms 0.74% __GI___nanosleep 3ms 0.74% 84.98% 3ms 0.74% __GI_munmap 0 0% 84.98% 3ms 0.74% __ieee754_pow_fma 0 0% 84.98% 3ms 0.74% __posix_memalign 0 0% 84.98% 3ms 0.74% __pow 0 0% 84.98% 3ms 0.74% _dl_map_object 2ms 0.49% 85.47% 3ms 0.74% _int_free 0 0% 85.47% 3ms 0.74% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 85.47% 3ms 0.74% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 85.47% 3ms 0.74% mca_base_component_var_register 0 0% 85.47% 3ms 0.74% ompi_mpi_finalize 0 0% 85.47% 3ms 0.74% orte_ess_base_proc_binding 0 0% 85.47% 3ms 0.74% std::pow (inline) 3ms 0.74% 86.21% 3ms 0.74% strcmp 0 0% 86.21% 3ms 0.74% usleep