File: Test3dBidomainProblemWithMetisForEfficiency Type: cpu Showing nodes accounting for 4400ms, 89.70% of 4905ms total Dropped 446 nodes (cum <= 24.52ms) flat flat% sum% cum cum% 0 0% 0% 4898ms 99.86% __libc_start_call_main 0 0% 0% 4898ms 99.86% __libc_start_main_impl 0 0% 0% 4898ms 99.86% _start 0 0% 0% 4896ms 99.82% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 4896ms 99.82% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 4896ms 99.82% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 4896ms 99.82% main 0 0% 0% 4862ms 99.12% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 4862ms 99.12% CxxTest::TestRunner::runTest (inline) 0 0% 0% 4862ms 99.12% Test3dBidomainProblemWithMetisForEfficiency::TestBidomain3d 0 0% 0% 4854ms 98.96% AbstractCardiacProblem::Solve 6ms 0.12% 0.12% 4844ms 98.76% AbstractDynamicLinearPdeSolver::Solve 13ms 0.27% 0.39% 2260ms 46.08% AbstractCardiacTissue::SolveCellSystems 2ms 0.041% 0.43% 2036ms 41.51% LinearSystem::Solve 0 0% 0.43% 1990ms 40.57% KSPSolve 4ms 0.082% 0.51% 1990ms 40.57% KSPSolve_Private 2ms 0.041% 0.55% 1943ms 39.61% KSPSolve_SYMMLQ 29ms 0.59% 1.14% 1232ms 25.12% AbstractCardiacCell::ComputeExceptVoltage 2ms 0.041% 1.18% 1144ms 23.32% MatMult 6ms 0.12% 1.30% 1135ms 23.14% MatMult_SeqAIJ (partial-inline) 1126ms 22.96% 24.26% 1135ms 23.14% MatMult_SeqAIJ_Inode (inline) 44ms 0.9% 25.16% 1093ms 22.28% AbstractOneStepIvpOdeSolver::InternalSolve 2ms 0.041% 25.20% 924ms 18.84% PCApply 1ms 0.02% 25.22% 916ms 18.67% PCApply_BJacobi_Singleblock 75ms 1.53% 26.75% 904ms 18.43% EulerIvpOdeSolver::CalculateNextYValue 285ms 5.81% 32.56% 824ms 16.80% CellLuoRudy1991FromCellML::EvaluateYDerivatives 29ms 0.59% 33.15% 811ms 16.53% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 33.15% 787ms 16.04% KSPSolve_PREONLY (partial-inline) 355ms 7.24% 40.39% 760ms 15.49% CellLuoRudy1991FromCellML::GetIIonic 0 0% 40.39% 746ms 15.21% MatSolve 0 0% 40.39% 746ms 15.21% PCApply_ICC 741ms 15.11% 55.49% 742ms 15.13% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 55.49% 654ms 13.33% KSP_PCApply.lto_priv.18 221ms 4.51% 60.00% 653ms 13.31% __GI___exp 36ms 0.73% 60.73% 488ms 9.95% BidomainSolver::SetupLinearSystem 338ms 6.89% 67.62% 339ms 6.91% __ieee754_exp_fma 0 0% 67.62% 337ms 6.87% KSPConvergedDefault 0 0% 67.62% 322ms 6.56% KSP_PCApply (partial-inline) 2ms 0.041% 67.67% 178ms 3.63% std::pow (inline) 15ms 0.31% 67.97% 173ms 3.53% __pow 98ms 2.00% 69.97% 161ms 3.28% CellLuoRudy1991FromCellML::VerifyStateVariables 17ms 0.35% 70.32% 156ms 3.18% __ieee754_pow_fma 133ms 2.71% 73.03% 133ms 2.71% [libchaste_heart.so] 0 0% 73.03% 107ms 2.18% MatNullSpaceRemove 104ms 2.12% 75.15% 104ms 2.12% [libm.so.6] 1ms 0.02% 75.17% 101ms 2.06% VecDuplicate 81ms 1.65% 76.82% 81ms 1.65% ddot_ 81ms 1.65% 78.47% 81ms 1.65% log_inline (inline) 41ms 0.84% 79.31% 73ms 1.49% TimeStepper::TimeStepper 24ms 0.49% 79.80% 62ms 1.26% MPI_Wtime 0 0% 79.80% 61ms 1.24% VecMDot 4ms 0.082% 79.88% 61ms 1.24% VecMXDot_Private 56ms 1.14% 81.02% 56ms 1.14% exp_inline (inline) 1ms 0.02% 81.04% 55ms 1.12% VecDot 0 0% 81.04% 54ms 1.10% VecDuplicate_MPI 14ms 0.29% 81.33% 53ms 1.08% PetscLogEventEndDefault 53ms 1.08% 82.41% 53ms 1.08% TimeStepper::CalculateNextTime 1ms 0.02% 82.43% 53ms 1.08% VecNorm 5ms 0.1% 82.53% 50ms 1.02% VecCopy 0 0% 82.53% 49ms 1% VecNorm_Seq 0 0% 82.53% 48ms 0.98% VecDot_Seq 2ms 0.041% 82.57% 48ms 0.98% VecXDot_Seq_Private.constprop.0 0 0% 82.57% 46ms 0.94% VecDuplicate_Seq 5ms 0.1% 82.67% 46ms 0.94% VecMAXPY 13ms 0.27% 82.94% 44ms 0.9% AbstractBidomainSolver::CheckCompatibilityCondition 0 0% 82.94% 44ms 0.9% AbstractBidomainSolver::FinaliseLinearSystem 12ms 0.24% 83.18% 43ms 0.88% PetscLogEventBeginDefault 6ms 0.12% 83.30% 43ms 0.88% PetscMallocA 42ms 0.86% 84.16% 43ms 0.88% VecMDot_Seq 4ms 0.082% 84.24% 42ms 0.86% VecAXPY 15ms 0.31% 84.55% 41ms 0.84% TimeStepper::AdvanceOneTimeStep 2ms 0.041% 84.59% 39ms 0.8% VecCreate 29ms 0.59% 85.18% 37ms 0.75% AbstractOneStepIvpOdeSolver::Solve 2ms 0.041% 85.22% 37ms 0.75% PetscMallocAlign 37ms 0.75% 85.97% 37ms 0.75% [[vdso]] 0 0% 85.97% 37ms 0.75% __GI___clock_gettime 0 0% 85.97% 35ms 0.71% VecNorm_MPI 1ms 0.02% 85.99% 35ms 0.71% VecNorm_MPI_Default.constprop.0 1ms 0.02% 86.01% 34ms 0.69% VecCreate_MPI_Private 1ms 0.02% 86.03% 34ms 0.69% VecDestroy 34ms 0.69% 86.73% 34ms 0.69% __ieee754_log_fma 11ms 0.22% 86.95% 31ms 0.63% AbstractCardiacCell::SetVoltage (partial-inline) 26ms 0.53% 87.48% 31ms 0.63% VecMAXPY_Seq 0 0% 87.48% 30ms 0.61% CxxTest::RealWorldDescription::setUp 0 0% 87.48% 30ms 0.61% PMPI_Init_thread 0 0% 87.48% 30ms 0.61% PetscInitialize 0 0% 87.48% 30ms 0.61% PetscSetup::setUpWorld 0 0% 87.48% 30ms 0.61% PetscSetupUtils::CommonSetup 0 0% 87.48% 30ms 0.61% PetscSetupUtils::InitialisePetsc 0 0% 87.48% 30ms 0.61% ompi_mpi_init 28ms 0.57% 88.05% 28ms 0.57% [libchaste_ode.so] 15ms 0.31% 88.36% 27ms 0.55% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 0 0% 88.36% 27ms 0.55% VecAXPY_Seq 2ms 0.041% 88.40% 27ms 0.55% __posix_memalign 2ms 0.041% 88.44% 26ms 0.53% VecStashCreate_Private 8ms 0.16% 88.60% 26ms 0.53% __GI___libc_malloc 26ms 0.53% 89.13% 26ms 0.53% std::isinf (inline) 1ms 0.02% 89.15% 25ms 0.51% VecCopy_Seq 2ms 0.041% 89.19% 25ms 0.51% VecSetType 25ms 0.51% 89.70% 25ms 0.51% daxpy_