File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12750ms, 86.60% of 14723ms total Dropped 737 nodes (cum <= 73.61ms) flat flat% sum% cum cum% 0 0% 0% 14713ms 99.93% __libc_start_call_main 0 0% 0% 14713ms 99.93% __libc_start_main_impl 0 0% 0% 14713ms 99.93% _start 0 0% 0% 14710ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14710ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14710ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14710ms 99.91% main 0 0% 0% 14679ms 99.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14679ms 99.70% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14679ms 99.70% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 3ms 0.02% 0.02% 14655ms 99.54% AbstractCardiacProblem::Solve 5ms 0.034% 0.054% 10995ms 74.68% AbstractDynamicLinearPdeSolver::Solve 64ms 0.43% 0.49% 8667ms 58.87% AbstractCardiacTissue::SolveCellSystems 82ms 0.56% 1.05% 5238ms 35.58% AbstractCardiacCell::ComputeExceptVoltage 131ms 0.89% 1.94% 4658ms 31.64% AbstractOneStepIvpOdeSolver::InternalSolve 122ms 0.83% 2.76% 3928ms 26.68% EulerIvpOdeSolver::CalculateNextYValue 969ms 6.58% 9.35% 3765ms 25.57% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 9.35% 3591ms 24.39% MonodomainProblem::WriteOneStep 0 0% 9.35% 3457ms 23.48% H5Dwrite 3ms 0.02% 9.37% 3449ms 23.43% Hdf5DataWriter::PutVector 4ms 0.027% 9.39% 3441ms 23.37% H5D__write 1185ms 8.05% 17.44% 3011ms 20.45% __GI___exp 83ms 0.56% 18.01% 2600ms 17.66% AbstractCardiacTissue::UpdateCaches (inline) 857ms 5.82% 23.83% 2451ms 16.65% CellLuoRudy1991FromCellML::GetIIonic 0 0% 23.83% 2189ms 14.87% H5D__chunk_collective_write 18ms 0.12% 23.95% 2189ms 14.87% H5F_set_coll_metadata_reads 12ms 0.082% 24.03% 1904ms 12.93% H5FD_s3comms_uriencode 2ms 0.014% 24.04% 1611ms 10.94% LinearSystem::Solve 0 0% 24.04% 1511ms 10.26% H5F_block_write 2ms 0.014% 24.06% 1511ms 10.26% H5PB_write 2ms 0.014% 24.07% 1508ms 10.24% H5F__accum_write 0 0% 24.07% 1507ms 10.24% KSPSolve 4ms 0.027% 24.10% 1507ms 10.24% KSPSolve_Private 1ms 0.0068% 24.11% 1506ms 10.23% H5FD_write 46ms 0.31% 24.42% 1500ms 10.19% 2ms 0.014% 24.43% 1498ms 10.17% KSPSolve_CG 2ms 0.014% 24.44% 1432ms 9.73% H5D__mpio_select_write 1337ms 9.08% 33.53% 1340ms 9.10% __ieee754_exp_fma 1ms 0.0068% 33.53% 1322ms 8.98% PMPI_File_write_at_all 1298ms 8.82% 42.35% 1300ms 8.83% __GI_pwritev64 8ms 0.054% 42.40% 1146ms 7.78% H5D__chunk_cacheable 367ms 2.49% 44.90% 983ms 6.68% H5S_select_iterate 13ms 0.088% 44.98% 837ms 5.68% std::pow (inline) 54ms 0.37% 45.35% 814ms 5.53% __pow 56ms 0.38% 45.73% 752ms 5.11% __ieee754_pow_fma 1ms 0.0068% 45.74% 742ms 5.04% PCApply 1ms 0.0068% 45.74% 740ms 5.03% PCApply_BJacobi_Singleblock 1ms 0.0068% 45.75% 703ms 4.77% KSPSolve_PREONLY 1ms 0.0068% 45.76% 696ms 4.73% PCApply_ICC 2ms 0.014% 45.77% 695ms 4.72% MatSolve 690ms 4.69% 50.46% 693ms 4.71% MatSolve_SeqSBAIJ_1_NaturalOrdering 252ms 1.71% 52.17% 690ms 4.69% MonodomainSolver::SetupLinearSystem 653ms 4.44% 56.61% 653ms 4.44% [libchaste_heart.so] 2ms 0.014% 56.62% 636ms 4.32% MatMult 63ms 0.43% 57.05% 634ms 4.31% H5D__chunk_set_sizes 631ms 4.29% 61.33% 634ms 4.31% MatMult_SeqAIJ 427ms 2.90% 64.23% 608ms 4.13% CellLuoRudy1991FromCellML::VerifyStateVariables 512ms 3.48% 67.71% 512ms 3.48% [libm.so.6] 75ms 0.51% 68.22% 505ms 3.43% H5S_mpio_space_type 0 0% 68.22% 470ms 3.19% KSP_PCApply.lto_priv.7 403ms 2.74% 70.96% 403ms 2.74% log_inline (inline) 5ms 0.034% 70.99% 378ms 2.57% KSPConvergedDefault 139ms 0.94% 71.94% 361ms 2.45% TimeStepper::TimeStepper 274ms 1.86% 73.80% 284ms 1.93% exp_inline (inline) 2ms 0.014% 73.81% 275ms 1.87% KSP_PCApply 27ms 0.18% 73.99% 239ms 1.62% H5VM_chunk_index 96ms 0.65% 74.65% 227ms 1.54% __GI___libc_malloc 224ms 1.52% 76.17% 224ms 1.52% TimeStepper::CalculateNextTime 212ms 1.44% 77.61% 212ms 1.44% ddot_ 13ms 0.088% 77.69% 198ms 1.34% ompi_datatype_destroy 5ms 0.034% 77.73% 196ms 1.33% MPI_Type_free 29ms 0.2% 77.93% 191ms 1.30% __GI___libc_free 181ms 1.23% 79.16% 181ms 1.23% H5VM_chunk_index_scaled 10ms 0.068% 79.22% 179ms 1.22% ompi_datatype_create 4ms 0.027% 79.25% 176ms 1.20% ompi_info_register_framework_params 34ms 0.23% 79.48% 175ms 1.19% ompi_datatype_release_args 104ms 0.71% 80.19% 162ms 1.10% _int_free 122ms 0.83% 81.02% 158ms 1.07% AbstractOneStepIvpOdeSolver::Solve 157ms 1.07% 82.08% 157ms 1.07% __ieee754_log_fma 38ms 0.26% 82.34% 152ms 1.03% AbstractCardiacCell::SetVoltage (partial-inline) 1ms 0.0068% 82.35% 142ms 0.96% Hdf5DataWriter::PutUnlimitedVariable 105ms 0.71% 83.06% 141ms 0.96% _int_malloc 133ms 0.9% 83.96% 133ms 0.9% [libchaste_ode.so] 2ms 0.014% 83.98% 127ms 0.86% VecNorm 3ms 0.02% 84.00% 126ms 0.86% VecTDot 50ms 0.34% 84.34% 122ms 0.83% H5S_hyper_add_span_element 1ms 0.0068% 84.34% 122ms 0.83% PMPI_File_set_view 0 0% 84.34% 122ms 0.83% VecTDot_Seq 0 0% 84.34% 122ms 0.83% VecXDot_Seq_Private.constprop.0 64ms 0.43% 84.78% 120ms 0.82% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 0 0% 84.78% 117ms 0.79% VecNorm_Seq 2ms 0.014% 84.79% 113ms 0.77% PMPI_Type_create_resized 30ms 0.2% 85.00% 110ms 0.75% H5S_set_version 0 0% 85.00% 106ms 0.72% VecDuplicate 1ms 0.0068% 85.00% 106ms 0.72% VecDuplicate_MPI 5ms 0.034% 85.04% 100ms 0.68% ompi_datatype_duplicate 69ms 0.47% 85.51% 97ms 0.66% __libc_calloc 31ms 0.21% 85.72% 95ms 0.65% ompi_datatype_set_args 26ms 0.18% 85.89% 91ms 0.62% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 2ms 0.014% 85.91% 88ms 0.6% opal_datatype_create_desc 26ms 0.18% 86.08% 82ms 0.56% std::__cxx11::basic_string::basic_string 45ms 0.31% 86.39% 80ms 0.54% H5VM_array_calc 1ms 0.0068% 86.40% 78ms 0.53% MPI_Type_create_hindexed 30ms 0.2% 86.60% 74ms 0.5% AbstractCardiacCell::GetVoltage (partial-inline)