File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 153688ms, 93.47% of 164425ms total Dropped 1115 nodes (cum <= 822.12ms) flat flat% sum% cum cum% 0 0% 0% 164398ms 100% __libc_start_call_main 0 0% 0% 164398ms 100% __libc_start_main_impl 0 0% 0% 164398ms 100% _start 0 0% 0% 164395ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 164395ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 164395ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 164395ms 100% main 0 0% 0% 164360ms 100% AbstractConvergenceTester::Converge 0 0% 0% 164360ms 100% CxxTest::RealTestDescription::run 0 0% 0% 164360ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 164360ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 164360ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 164360ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 6ms 0.0036% 0.0036% 163183ms 99.24% AbstractCardiacProblem::Solve 11ms 0.0067% 0.01% 162523ms 98.84% AbstractDynamicLinearPdeSolver::Solve 4ms 0.0024% 0.013% 113765ms 69.19% LinearSystem::Solve 1ms 0.00061% 0.013% 113292ms 68.90% KSPSolve 8ms 0.0049% 0.018% 113292ms 68.90% KSPSolve_Private 21ms 0.013% 0.031% 112853ms 68.63% KSPSolve_SYMMLQ 3ms 0.0018% 0.033% 73246ms 44.55% MatMult 1269ms 0.77% 0.8% 73243ms 44.54% MatMult_SeqAIJ (partial-inline) 71360ms 43.40% 44.20% 72323ms 43.99% MatMult_SeqAIJ_Inode (inline) 9ms 0.0055% 44.21% 39706ms 24.15% PCApply 3ms 0.0018% 44.21% 39697ms 24.14% PCApply_BJacobi_Singleblock 4ms 0.0024% 44.21% 36763ms 22.36% KSPSolve_PREONLY (partial-inline) 1ms 0.00061% 44.21% 35444ms 21.56% PCApply_ICC 5ms 0.003% 44.22% 35443ms 21.56% MatSolve 34961ms 21.26% 65.48% 35438ms 21.55% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 2ms 0.0012% 65.48% 34216ms 20.81% KSP_PCApply.lto_priv.18 226ms 0.14% 65.62% 32657ms 19.86% AbstractCardiacTissue::SolveCellSystems 529ms 0.32% 65.94% 25737ms 15.65% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 3653ms 2.22% 68.16% 21762ms 13.24% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 886ms 0.54% 68.70% 15029ms 9.14% BidomainSolver::SetupLinearSystem 1226ms 0.75% 69.45% 14811ms 9.01% CardiacNewtonSolver::Solve 5554ms 3.38% 72.82% 9790ms 5.95% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 0 0% 72.82% 7596ms 4.62% KSP_PCApply (partial-inline) 8ms 0.0049% 72.83% 6876ms 4.18% KSPConvergedDefault 56ms 0.034% 72.86% 6009ms 3.65% AbstractCardiacTissue::UpdateCaches (inline) 1362ms 0.83% 73.69% 5659ms 3.44% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 3995ms 2.43% 76.12% 3995ms 2.43% __memcpy_evex_unaligned_erms 0 0% 76.12% 3959ms 2.41% PetscMemcpy (inline) 3894ms 2.37% 78.49% 3901ms 2.37% __ieee754_log_fma 8ms 0.0049% 78.49% 3618ms 2.20% MatNullSpaceRemove 10ms 0.0061% 78.50% 3586ms 2.18% VecAXPY 3ms 0.0018% 78.50% 3576ms 2.17% VecAXPY_Seq 3563ms 2.17% 80.67% 3563ms 2.17% daxpy_ 29ms 0.018% 80.69% 3523ms 2.14% VecCopy 1ms 0.00061% 80.69% 3493ms 2.12% VecCopy_Seq (partial-inline) 2438ms 1.48% 82.17% 3372ms 2.05% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 0 0% 82.17% 3304ms 2.01% boost::numeric::ublas::norm_inf (inline) 2798ms 1.70% 83.87% 3304ms 2.01% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 83.87% 3304ms 2.01% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 83.87% 3304ms 2.01% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 300ms 0.18% 84.05% 2750ms 1.67% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 2749ms 1.67% 85.73% 2749ms 1.67% [libchaste_heart.so] 10ms 0.0061% 85.73% 2734ms 1.66% std::pow (inline) 189ms 0.11% 85.85% 2674ms 1.63% __pow 292ms 0.18% 86.03% 2451ms 1.49% __ieee754_pow_fma 1ms 0.00061% 86.03% 2361ms 1.44% VecMDot 15ms 0.0091% 86.03% 2360ms 1.44% VecMXDot_Private 2337ms 1.42% 87.46% 2340ms 1.42% VecMDot_Seq 2061ms 1.25% 88.71% 2061ms 1.25% ddot_ 2049ms 1.25% 89.96% 2049ms 1.25% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3ms 0.0018% 89.96% 1932ms 1.18% AbstractFeVolumeIntegralAssembler::DoAssemble 1506ms 0.92% 90.87% 1759ms 1.07% exp_inline (inline) 4ms 0.0024% 90.88% 1733ms 1.05% VecDot 0 0% 90.88% 1729ms 1.05% VecDot_Seq 5ms 0.003% 90.88% 1729ms 1.05% VecXDot_Seq_Private.constprop.0 22ms 0.013% 90.89% 1652ms 1.00% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1525ms 0.93% 91.82% 1525ms 0.93% __memset_evex_unaligned_erms 0 0% 91.82% 1520ms 0.92% PetscMemzero (inline) 0 0% 91.82% 1334ms 0.81% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1ms 0.00061% 91.82% 1253ms 0.76% VecDuplicate 4ms 0.0024% 91.82% 1249ms 0.76% VecMAXPY 1240ms 0.75% 92.58% 1245ms 0.76% VecMAXPY_Seq 408ms 0.25% 92.83% 1112ms 0.68% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 8ms 0.0049% 92.83% 1070ms 0.65% boost::numeric::ublas::matrix_assign (inline) 9ms 0.0055% 92.84% 1069ms 0.65% PetscMallocA 10ms 0.0061% 92.84% 1060ms 0.64% PetscMallocAlign (partial-inline) 151ms 0.092% 92.93% 1058ms 0.64% boost::numeric::ublas::indexing_matrix_assign 0 0% 92.93% 1015ms 0.62% CuboidMeshConstructor::Construct 0 0% 92.93% 1014ms 0.62% AbstractTetrahedralMesh::ConstructRegularSlabMesh 3ms 0.0018% 92.94% 1014ms 0.62% DistributedTetrahedralMesh::ConstructCuboid 4ms 0.0024% 92.94% 896ms 0.54% Element::Element 2ms 0.0012% 92.94% 875ms 0.53% AbstractTetrahedralElement::CalculateJacobian 7ms 0.0043% 92.94% 874ms 0.53% VecScale 6ms 0.0036% 92.95% 867ms 0.53% VecScale_Seq 859ms 0.52% 93.47% 859ms 0.52% dscal_ 1ms 0.00061% 93.47% 830ms 0.5% AbstractTetrahedralElement::AbstractTetrahedralElement