File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12676ms, 85.70% of 14791ms total Dropped 745 nodes (cum <= 73.95ms) flat flat% sum% cum cum% 0 0% 0% 14784ms 100% __libc_start_call_main 0 0% 0% 14784ms 100% __libc_start_main_impl 0 0% 0% 14784ms 100% _start 0 0% 0% 14781ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14781ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14781ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14781ms 99.93% main 0 0% 0% 14743ms 99.68% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14743ms 99.68% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14743ms 99.68% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 0 0% 0% 14721ms 99.53% AbstractCardiacProblem::Solve 2ms 0.014% 0.014% 11506ms 77.79% AbstractDynamicLinearPdeSolver::Solve 42ms 0.28% 0.3% 9167ms 61.98% AbstractCardiacTissue::SolveCellSystems 120ms 0.81% 1.11% 5621ms 38.00% AbstractCardiacCell::ComputeExceptVoltage 169ms 1.14% 2.25% 4854ms 32.82% AbstractOneStepIvpOdeSolver::InternalSolve 188ms 1.27% 3.52% 4144ms 28.02% EulerIvpOdeSolver::CalculateNextYValue 911ms 6.16% 9.68% 3906ms 26.41% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1741ms 11.77% 21.45% 3588ms 24.26% __GI___exp 0 0% 21.45% 3153ms 21.32% MonodomainProblem::WriteOneStep 0 0% 21.45% 3019ms 20.41% H5Dwrite 3ms 0.02% 21.47% 3014ms 20.38% Hdf5DataWriter::PutVector 3ms 0.02% 21.49% 2994ms 20.24% H5D__write 88ms 0.59% 22.09% 2671ms 18.06% AbstractCardiacTissue::UpdateCaches (inline) 789ms 5.33% 27.42% 2554ms 17.27% CellLuoRudy1991FromCellML::GetIIonic 1637ms 11.07% 38.49% 1775ms 12.00% __ieee754_exp_fma 0 0% 38.49% 1764ms 11.93% H5D__chunk_collective_write 14ms 0.095% 38.58% 1764ms 11.93% H5F_set_coll_metadata_reads 19ms 0.13% 38.71% 1599ms 10.81% H5FD_s3comms_uriencode 1ms 0.0068% 38.72% 1558ms 10.53% LinearSystem::Solve 2ms 0.014% 38.73% 1429ms 9.66% KSPSolve 4ms 0.027% 38.76% 1427ms 9.65% KSPSolve_Private 3ms 0.02% 38.78% 1412ms 9.55% KSPSolve_CG 52ms 0.35% 39.13% 1212ms 8.19% 2ms 0.014% 39.15% 1210ms 8.18% H5F_block_write 1ms 0.0068% 39.15% 1208ms 8.17% H5PB_write 1ms 0.0068% 39.16% 1207ms 8.16% H5F__accum_write 2ms 0.014% 39.17% 1206ms 8.15% H5FD_write 7ms 0.047% 39.22% 1127ms 7.62% H5D__chunk_cacheable 5ms 0.034% 39.25% 1120ms 7.57% H5D__mpio_select_write 2ms 0.014% 39.27% 1023ms 6.92% PMPI_File_write_at_all 992ms 6.71% 45.97% 996ms 6.73% __GI_pwritev64 429ms 2.90% 48.87% 974ms 6.59% H5S_select_iterate 7ms 0.047% 48.92% 949ms 6.42% std::pow (inline) 87ms 0.59% 49.51% 942ms 6.37% __pow 105ms 0.71% 50.22% 853ms 5.77% __ieee754_pow_fma 2ms 0.014% 50.23% 765ms 5.17% PCApply 2ms 0.014% 50.25% 757ms 5.12% PCApply_BJacobi_Singleblock 311ms 2.10% 52.35% 754ms 5.10% MonodomainSolver::SetupLinearSystem 0 0% 52.35% 717ms 4.85% KSPSolve_PREONLY 6ms 0.041% 52.39% 713ms 4.82% MatSolve 0 0% 52.39% 713ms 4.82% PCApply_ICC 691ms 4.67% 57.06% 707ms 4.78% MatSolve_SeqSBAIJ_1_NaturalOrdering 1ms 0.0068% 57.07% 685ms 4.63% MatMult 680ms 4.60% 61.67% 684ms 4.62% MatMult_SeqAIJ 349ms 2.36% 64.03% 683ms 4.62% CellLuoRudy1991FromCellML::VerifyStateVariables 1ms 0.0068% 64.03% 600ms 4.06% KSP_PCApply.lto_priv.7 67ms 0.45% 64.49% 560ms 3.79% H5D__chunk_set_sizes 51ms 0.34% 64.83% 467ms 3.16% H5S_mpio_space_type 422ms 2.85% 67.68% 422ms 2.85% log_inline (inline) 275ms 1.86% 69.54% 278ms 1.88% exp_inline (inline) 125ms 0.85% 70.39% 241ms 1.63% TimeStepper::TimeStepper 3ms 0.02% 70.41% 236ms 1.60% KSPConvergedDefault 43ms 0.29% 70.70% 222ms 1.50% __GI___libc_malloc 148ms 1.00% 71.70% 191ms 1.29% _int_malloc 116ms 0.78% 72.48% 189ms 1.28% top12 (inline) 184ms 1.24% 73.73% 184ms 1.24% [libchaste_heart.so] 145ms 0.98% 74.71% 182ms 1.23% AbstractOneStepIvpOdeSolver::Solve 18ms 0.12% 74.83% 179ms 1.21% H5VM_chunk_index 174ms 1.18% 76.01% 174ms 1.18% std::isinf (inline) 11ms 0.074% 76.08% 170ms 1.15% ompi_datatype_create 0 0% 76.08% 166ms 1.12% KSP_PCApply 35ms 0.24% 76.32% 165ms 1.12% AbstractCardiacCell::SetVoltage (partial-inline) 86ms 0.58% 76.90% 165ms 1.12% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 127ms 0.86% 77.76% 152ms 1.03% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 1ms 0.0068% 77.76% 139ms 0.94% Hdf5DataWriter::PutUnlimitedVariable 7ms 0.047% 77.81% 137ms 0.93% MPI_Type_free 9ms 0.061% 77.87% 135ms 0.91% ompi_datatype_destroy 28ms 0.19% 78.06% 130ms 0.88% __GI___libc_free 123ms 0.83% 78.89% 123ms 0.83% ddot_ 122ms 0.82% 79.72% 122ms 0.82% TimeStepper::CalculateNextTime 30ms 0.2% 79.92% 116ms 0.78% ompi_datatype_release_args 4ms 0.027% 79.95% 116ms 0.78% ompi_info_register_framework_params 111ms 0.75% 80.70% 111ms 0.75% __memcpy_avx_unaligned_erms 3ms 0.02% 80.72% 110ms 0.74% PMPI_File_set_view 3ms 0.02% 80.74% 107ms 0.72% PMPI_Type_create_resized 0 0% 80.74% 104ms 0.7% VecDuplicate 6ms 0.041% 80.78% 104ms 0.7% VecDuplicate_MPI 103ms 0.7% 81.48% 103ms 0.7% __ieee754_log_fma 11ms 0.074% 81.55% 102ms 0.69% H5S_set_version 40ms 0.27% 81.82% 102ms 0.69% _int_free 93ms 0.63% 82.45% 100ms 0.68% AbstractParameterisedSystem::SetAnyVariable 2ms 0.014% 82.46% 100ms 0.68% ompi_datatype_duplicate 46ms 0.31% 82.77% 95ms 0.64% H5S_hyper_add_span_element 95ms 0.64% 83.42% 95ms 0.64% H5VM_chunk_index_scaled 3ms 0.02% 83.44% 92ms 0.62% VecNorm 31ms 0.21% 83.65% 91ms 0.62% H5VM_array_calc 39ms 0.26% 83.91% 90ms 0.61% std::__cxx11::basic_string::basic_string 65ms 0.44% 84.35% 88ms 0.59% AbstractParameterisedSystem::GetAnyVariable 0 0% 84.35% 86ms 0.58% VecNorm_Seq 1ms 0.0068% 84.36% 81ms 0.55% MPI_Type_create_hindexed 20ms 0.14% 84.49% 79ms 0.53% ompi_datatype_set_args 17ms 0.11% 84.61% 79ms 0.53% std::vector::_M_assign_aux (inline) 0 0% 84.61% 79ms 0.53% std::vector::assign (inline) 39ms 0.26% 84.87% 78ms 0.53% AbstractCardiacCell::GetVoltage (partial-inline) 44ms 0.3% 85.17% 77ms 0.52% TimeStepper::AdvanceOneTimeStep 5ms 0.034% 85.20% 76ms 0.51% opal_datatype_create_desc 74ms 0.5% 85.70% 74ms 0.5% [libm.so.6]