File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 110197ms, 91.64% of 120250ms total Dropped 1110 nodes (cum <= 601.25ms) flat flat% sum% cum cum% 0 0% 0% 120232ms 100% __libc_start_call_main 0 0% 0% 120232ms 100% __libc_start_main_impl 0 0% 0% 120232ms 100% _start 0 0% 0% 120229ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 120229ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 120229ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 120229ms 100% main 0 0% 0% 120198ms 100% CxxTest::RealTestDescription::run 0 0% 0% 120198ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 120198ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 120198ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 120198ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 0 0% 0% 120197ms 100% AbstractConvergenceTester::Converge 7ms 0.0058% 0.0058% 118918ms 98.89% AbstractCardiacProblem::Solve 7ms 0.0058% 0.012% 118097ms 98.21% AbstractDynamicLinearPdeSolver::Solve 7ms 0.0058% 0.017% 66399ms 55.22% LinearSystem::Solve 0 0% 0.017% 65869ms 54.78% KSPSolve 11ms 0.0091% 0.027% 65869ms 54.78% KSPSolve_Private 8ms 0.0067% 0.033% 65434ms 54.41% KSPSolve_SYMMLQ 187ms 0.16% 0.19% 43013ms 35.77% AbstractCardiacTissue::SolveCellSystems 1ms 0.00083% 0.19% 37407ms 31.11% PCApply 2ms 0.0017% 0.19% 37399ms 31.10% PCApply_BJacobi_Singleblock 1ms 0.00083% 0.19% 34753ms 28.90% KSPSolve_PREONLY (partial-inline) 2ms 0.0017% 0.19% 33644ms 27.98% PCApply_ICC 5ms 0.0042% 0.2% 33642ms 27.98% MatSolve 33122ms 27.54% 27.74% 33637ms 27.97% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 1432ms 1.19% 28.93% 33123ms 27.55% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 4ms 0.0033% 28.94% 32422ms 26.96% KSP_PCApply.lto_priv.18 6981ms 5.81% 34.74% 28596ms 23.78% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 7ms 0.0058% 34.75% 21709ms 18.05% MatMult 237ms 0.2% 34.94% 21702ms 18.05% MatMult_SeqAIJ (partial-inline) 21171ms 17.61% 52.55% 21702ms 18.05% MatMult_SeqAIJ_Inode (inline) 1993ms 1.66% 54.21% 14682ms 12.21% CardiacNewtonSolver::Solve 290ms 0.24% 54.45% 9038ms 7.52% AbstractCardiacTissue::UpdateCaches (inline) 4394ms 3.65% 58.10% 8700ms 7.23% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1967ms 1.64% 59.74% 8566ms 7.12% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 1074ms 0.89% 60.63% 7629ms 6.34% BidomainSolver::SetupLinearSystem 1277ms 1.06% 61.69% 7540ms 6.27% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 0 0% 61.69% 7030ms 5.85% KSP_PCApply (partial-inline) 7ms 0.0058% 61.70% 6443ms 5.36% KSPConvergedDefault 6010ms 5.00% 66.70% 6010ms 5.00% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 3969ms 3.30% 70.00% 4013ms 3.34% __ieee754_log_fma 0 0% 70.00% 3600ms 2.99% boost::numeric::ublas::norm_inf (inline) 2436ms 2.03% 72.02% 3600ms 2.99% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 72.02% 3600ms 2.99% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 72.02% 3600ms 2.99% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 8ms 0.0067% 72.03% 3443ms 2.86% MatNullSpaceRemove 3212ms 2.67% 74.70% 3212ms 2.67% __memcpy_avx_unaligned_erms 0 0% 74.70% 3193ms 2.66% PetscMemcpy (inline) 14ms 0.012% 74.71% 3101ms 2.58% std::pow (inline) 397ms 0.33% 75.04% 3080ms 2.56% __pow 1725ms 1.43% 76.48% 2922ms 2.43% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 2774ms 2.31% 78.79% 2774ms 2.31% ddot_ 25ms 0.021% 78.81% 2715ms 2.26% VecCopy 3ms 0.0025% 78.81% 2688ms 2.24% VecCopy_Seq (partial-inline) 340ms 0.28% 79.09% 2676ms 2.23% __ieee754_pow_fma 17ms 0.014% 79.11% 2575ms 2.14% VecAXPY 9ms 0.0075% 79.11% 2558ms 2.13% VecAXPY_Seq 2537ms 2.11% 81.22% 2537ms 2.11% daxpy_ 6ms 0.005% 81.23% 2266ms 1.88% VecDot 0 0% 81.23% 2260ms 1.88% VecDot_Seq 2ms 0.0017% 81.23% 2260ms 1.88% VecXDot_Seq_Private.constprop.0 1ms 0.00083% 81.23% 2067ms 1.72% AbstractFeVolumeIntegralAssembler::DoAssemble 1ms 0.00083% 81.23% 1963ms 1.63% VecMDot 16ms 0.013% 81.24% 1962ms 1.63% VecMXDot_Private 1939ms 1.61% 82.86% 1943ms 1.62% VecMDot_Seq 30ms 0.025% 82.88% 1712ms 1.42% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1527ms 1.27% 84.15% 1589ms 1.32% exp_inline (inline) 1483ms 1.23% 85.38% 1483ms 1.23% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::CheckIndex0 (inline) 5ms 0.0042% 85.39% 1472ms 1.22% VecMAXPY 1457ms 1.21% 86.60% 1467ms 1.22% VecMAXPY_Seq 0 0% 86.60% 1417ms 1.18% AbstractFeAssemblerInterface::AssembleMatrix (inline) 1205ms 1.00% 87.60% 1205ms 1.00% __memset_avx2_unaligned_erms 0 0% 87.60% 1187ms 0.99% PetscMemzero (inline) 0 0% 87.60% 1126ms 0.94% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 87.60% 1126ms 0.94% CuboidMeshConstructor::Construct 1ms 0.00083% 87.60% 1126ms 0.94% DistributedTetrahedralMesh::ConstructCuboid 6ms 0.005% 87.61% 1101ms 0.92% boost::numeric::ublas::matrix_assign (inline) 199ms 0.17% 87.77% 1085ms 0.9% boost::numeric::ublas::indexing_matrix_assign 788ms 0.66% 88.43% 1075ms 0.89% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.43% 1074ms 0.89% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 88.43% 1074ms 0.89% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 88.43% 1074ms 0.89% boost_numeric_ublas_abs (inline) 1074ms 0.89% 89.32% 1074ms 0.89% std::abs (inline) 5ms 0.0042% 89.33% 1018ms 0.85% VecDuplicate 0 0% 89.33% 1003ms 0.83% Element::Element 1ms 0.00083% 89.33% 994ms 0.83% AbstractTetrahedralElement::CalculateJacobian 3ms 0.0025% 89.33% 933ms 0.78% AbstractTetrahedralElement::AbstractTetrahedralElement 921ms 0.77% 90.10% 921ms 0.77% [libchaste_heart.so] 8ms 0.0067% 90.10% 913ms 0.76% VecScale 3ms 0.0025% 90.10% 905ms 0.75% VecScale_Seq 901ms 0.75% 90.85% 901ms 0.75% dscal_ 10ms 0.0083% 90.86% 852ms 0.71% BidomainAssembler::ComputeMatrixTerm 10ms 0.0083% 90.87% 850ms 0.71% PetscMallocA 11ms 0.0091% 90.88% 840ms 0.7% PetscMallocAlign (partial-inline) 4ms 0.0033% 90.88% 832ms 0.69% boost::numeric::ublas::c_matrix::c_matrix (inline) 2ms 0.0017% 90.88% 775ms 0.64% VecNorm 2ms 0.0017% 90.89% 769ms 0.64% VecNorm_Seq 0 0% 90.89% 741ms 0.62% BidomainProblem::WriteOneStep 0 0% 90.89% 705ms 0.59% AbstractBidomainSolver::FinaliseLinearSystem 206ms 0.17% 91.06% 704ms 0.59% AbstractBidomainSolver::CheckCompatibilityCondition 694ms 0.58% 91.63% 694ms 0.58% log_inline (inline) 0 0% 91.63% 650ms 0.54% AbstractFeAssemblerInterface::Assemble (inline) 6ms 0.005% 91.64% 605ms 0.5% VecDuplicate_Seq