File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 429ms, 88.64% of 484ms total Dropped 200 nodes (cum <= 2.42ms) flat flat% sum% cum cum% 0 0% 0% 472ms 97.52% __libc_start_call_main 0 0% 0% 472ms 97.52% __libc_start_main_impl 0 0% 0% 472ms 97.52% _start 0 0% 0% 469ms 96.90% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 469ms 96.90% CxxTest::TestRunner::runAllTests 0 0% 0% 469ms 96.90% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 469ms 96.90% main 0 0% 0% 432ms 89.26% CxxTest::RealTestDescription::run 0 0% 0% 432ms 89.26% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 432ms 89.26% CxxTest::TestRunner::runTest (inline) 0 0% 0% 432ms 89.26% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 432ms 89.26% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 426ms 88.02% AbstractCardiacProblem::Solve 0 0% 0% 425ms 87.81% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 385ms 79.55% LinearSystem::Solve 0 0% 0% 384ms 79.34% KSPSolve 0 0% 0% 384ms 79.34% KSPSolve_Private 0 0% 0% 383ms 79.13% KSPSolve_CG 0 0% 0% 240ms 49.59% KSP_PCApply.lto_priv.7 1ms 0.21% 0.21% 234ms 48.35% PCApply 0 0% 0.21% 233ms 48.14% PCApply_BJacobi_Singleblock 0 0% 0.21% 201ms 41.53% KSPSolve_PREONLY (partial-inline) 0 0% 0.21% 185ms 38.22% MatSolve 185ms 38.22% 38.43% 185ms 38.22% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 38.43% 185ms 38.22% PCApply_ICC 0 0% 38.43% 89ms 18.39% MatMult 0 0% 38.43% 89ms 18.39% MatMult_SeqAIJ 89ms 18.39% 56.82% 89ms 18.39% MatMult_SeqAIJ_Inode (inline) 1ms 0.21% 57.02% 35ms 7.23% AbstractCardiacTissue::SolveCellSystems 1ms 0.21% 57.23% 34ms 7.02% 0 0% 57.23% 34ms 7.02% MatNullSpaceRemove 0 0% 57.23% 33ms 6.82% CxxTest::RealWorldDescription::setUp 0 0% 57.23% 33ms 6.82% PMPI_Init_thread 0 0% 57.23% 33ms 6.82% PetscInitialize 0 0% 57.23% 33ms 6.82% PetscSetup::setUpWorld 0 0% 57.23% 33ms 6.82% PetscSetupUtils::CommonSetup 0 0% 57.23% 33ms 6.82% PetscSetupUtils::InitialisePetsc 0 0% 57.23% 33ms 6.82% ompi_mpi_init 26ms 5.37% 62.60% 26ms 5.37% ddot_ 0 0% 62.60% 22ms 4.55% AbstractCardiacCell::ComputeExceptVoltage 0 0% 62.60% 22ms 4.55% VecMDot 22ms 4.55% 67.15% 22ms 4.55% VecMDot_Seq 0 0% 67.15% 22ms 4.55% VecMXDot_Private 0 0% 67.15% 21ms 4.34% orte_init 0 0% 67.15% 20ms 4.13% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 67.15% 19ms 3.93% VecTDot 0 0% 67.15% 19ms 3.93% VecTDot_Seq 1ms 0.21% 67.36% 19ms 3.93% VecXDot_Seq_Private.constprop.0 0 0% 67.36% 18ms 3.72% VecAYPX 18ms 3.72% 71.07% 18ms 3.72% VecAYPX_Seq 0 0% 71.07% 17ms 3.51% KSP_PCApply (partial-inline) 3ms 0.62% 71.69% 16ms 3.31% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 71.69% 16ms 3.31% EulerIvpOdeSolver::CalculateNextYValue 0 0% 71.69% 13ms 2.69% __GI__dl_catch_exception 0 0% 71.69% 13ms 2.69% _dl_catch_error 0 0% 71.69% 13ms 2.69% _dlerror_run 0 0% 71.69% 13ms 2.69% hwloc_topology_load 0 0% 71.69% 13ms 2.69% mca_base_framework_open 0 0% 71.69% 12ms 2.48% VecMAXPY 12ms 2.48% 74.17% 12ms 2.48% VecMAXPY_Seq 5ms 1.03% 75.21% 12ms 2.48% __GI___exp 0 0% 75.21% 12ms 2.48% _dl_init 0 0% 75.21% 12ms 2.48% call_init (inline) 0 0% 75.21% 12ms 2.48% hwloc_linux_get_tid_last_cpu_location 0 0% 75.21% 12ms 2.48% mca_base_framework_components_register 0 0% 75.21% 12ms 2.48% mca_base_framework_register 0 0% 75.21% 12ms 2.48% opal_stackframe_output 0 0% 75.21% 10ms 2.07% AbstractCardiacTissue::UpdateCaches (inline) 3ms 0.62% 75.83% 10ms 2.07% CellLuoRudy1991FromCellML::GetIIonic 0 0% 75.83% 10ms 2.07% ___dlopen 0 0% 75.83% 10ms 2.07% _dl_open 0 0% 75.83% 10ms 2.07% dl_open_worker 0 0% 75.83% 10ms 2.07% dlopen_doit 0 0% 75.83% 10ms 2.07% dlopen_implementation (inline) 0 0% 75.83% 9ms 1.86% PetscMemzero (inline) 0 0% 75.83% 9ms 1.86% VecNorm 0 0% 75.83% 9ms 1.86% VecNorm_Seq 9ms 1.86% 77.69% 9ms 1.86% __memset_avx2_unaligned_erms 0 0% 77.69% 9ms 1.86% _dl_start_user 0 0% 77.69% 9ms 1.86% mca_base_component_find 0 0% 77.69% 9ms 1.86% mca_base_component_repository_open 5ms 1.03% 78.72% 7ms 1.45% __ieee754_exp_fma 0 0% 78.72% 7ms 1.45% dl_open_worker_begin 0 0% 78.72% 6ms 1.24% VecAXPY 0 0% 78.72% 6ms 1.24% VecAXPY_Seq 0 0% 78.72% 6ms 1.24% VecSet 0 0% 78.72% 6ms 1.24% VecSet_Seq (partial-inline) 1ms 0.21% 78.93% 6ms 1.24% _dl_runtime_resolve_xsavec 6ms 1.24% 80.17% 6ms 1.24% daxpy_ 0 0% 80.17% 6ms 1.24% mca_base_framework_components_open 0 0% 80.17% 6ms 1.24% mca_topo_base_dist_graph_neighbors_count 0 0% 80.17% 5ms 1.03% AbstractCardiacProblem::Initialise 0 0% 80.17% 5ms 1.03% VecDestroy 1ms 0.21% 80.37% 5ms 1.03% __ieee754_pow_fma 0 0% 80.37% 5ms 1.03% __pow 2ms 0.41% 80.79% 5ms 1.03% _dl_fixup 0 0% 80.79% 5ms 1.03% _dl_lookup_symbol_x 1ms 0.21% 80.99% 5ms 1.03% _dl_map_object 3ms 0.62% 81.61% 5ms 1.03% boost::serialization::singleton::get_instance 0 0% 81.61% 5ms 1.03% opal_hwloc_base_get_topology 0 0% 81.61% 5ms 1.03% orte_ess_base_proc_binding 0 0% 81.61% 5ms 1.03% std::pow (inline) 1ms 0.21% 81.82% 4ms 0.83% BidomainSolver::SetupLinearSystem 0 0% 81.82% 4ms 0.83% CxxTest::RealWorldDescription::tearDown 0 0% 81.82% 4ms 0.83% PetscFinalize 1ms 0.21% 82.02% 4ms 0.83% PetscFreeAlign 0 0% 82.02% 4ms 0.83% PetscSetup::tearDownWorld 0 0% 82.02% 4ms 0.83% PetscSetupUtils::CommonFinalize 0 0% 82.02% 4ms 0.83% VecDuplicate 0 0% 82.02% 4ms 0.83% VecDuplicate_Seq 1ms 0.21% 82.23% 4ms 0.83% __GI___libc_free 4ms 0.83% 83.06% 4ms 0.83% __GI___libc_read 2ms 0.41% 83.47% 4ms 0.83% __cxa_finalize 0 0% 83.47% 4ms 0.83% _dl_call_fini 4ms 0.83% 84.30% 4ms 0.83% _int_malloc 4ms 0.83% 85.12% 4ms 0.83% do_lookup_x 0 0% 85.12% 4ms 0.83% mca_base_var_group_register 0 0% 85.12% 4ms 0.83% mca_base_var_register 0 0% 85.12% 4ms 0.83% ompi_mpi_finalize 0 0% 85.12% 3ms 0.62% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 85.12% 3ms 0.62% KSPConvergedDefault 2ms 0.41% 85.54% 3ms 0.62% KSPSetUp 0 0% 85.54% 3ms 0.62% PetscMallocA 0 0% 85.54% 3ms 0.62% PetscMallocAlign (partial-inline) 0 0% 85.54% 3ms 0.62% VecCreate_Seq 0 0% 85.54% 3ms 0.62% VecDestroy_Seq 0 0% 85.54% 3ms 0.62% VecSetType 3ms 0.62% 86.16% 3ms 0.62% __GI___clock_nanosleep 0 0% 86.16% 3ms 0.62% __GI___nanosleep 0 0% 86.16% 3ms 0.62% __GI_exit 0 0% 86.16% 3ms 0.62% __dlclose 3ms 0.62% 86.78% 3ms 0.62% __libc_openat64 0 0% 86.78% 3ms 0.62% __run_exit_handlers 0 0% 86.78% 3ms 0.62% _dl_close 0 0% 86.78% 3ms 0.62% _dl_close_worker (inline) 0 0% 86.78% 3ms 0.62% _dl_map_object_deps 3ms 0.62% 87.40% 3ms 0.62% _int_free 0 0% 87.40% 3ms 0.62% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 87.40% 3ms 0.62% clone3 0 0% 87.40% 3ms 0.62% event_base_loop 0 0% 87.40% 3ms 0.62% event_del_nolock_ 3ms 0.62% 88.02% 3ms 0.62% log_inline (inline) 0 0% 88.02% 3ms 0.62% mca_base_component_repository_release 0 0% 88.02% 3ms 0.62% mca_base_component_var_register 0 0% 88.02% 3ms 0.62% mca_base_components_close 0 0% 88.02% 3ms 0.62% mca_base_framework_close 0 0% 88.02% 3ms 0.62% openaux 0 0% 88.02% 3ms 0.62% start_thread 3ms 0.62% 88.64% 3ms 0.62% strcmp 0 0% 88.64% 3ms 0.62% usleep