File: TestConvergenceEfficiency Type: cpu Showing nodes accounting for 116991ms, 91.37% of 128047ms total Dropped 1188 nodes (cum <= 640.24ms) flat flat% sum% cum cum% 0 0% 0% 128035ms 100% __libc_start_call_main 0 0% 0% 128035ms 100% __libc_start_main_impl 0 0% 0% 128035ms 100% _start 0 0% 0% 128031ms 100% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 128031ms 100% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 128031ms 100% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 128031ms 100% main 0 0% 0% 127989ms 100% AbstractConvergenceTester::Converge 0 0% 0% 127989ms 100% CxxTest::RealTestDescription::run 0 0% 0% 127989ms 100% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 127989ms 100% CxxTest::TestRunner::runTest (inline) 0 0% 0% 127989ms 100% TestConvergenceEfficiency::Test3DSpace10Efficiency (inline) 0 0% 0% 127989ms 100% TestDescription_TestConvergenceEfficiency_Test3DSpace10Efficiency::runTest (inline) 7ms 0.0055% 0.0055% 126786ms 99.02% AbstractCardiacProblem::Solve 7ms 0.0055% 0.011% 125937ms 98.35% AbstractDynamicLinearPdeSolver::Solve 6ms 0.0047% 0.016% 69044ms 53.92% LinearSystem::Solve 2ms 0.0016% 0.017% 68487ms 53.49% KSPSolve 5ms 0.0039% 0.021% 68485ms 53.48% KSPSolve_Private 13ms 0.01% 0.031% 68090ms 53.18% KSPSolve_SYMMLQ 489ms 0.38% 0.41% 47706ms 37.26% AbstractCardiacTissue::SolveCellSystems 12ms 0.0094% 0.42% 39266ms 30.67% PCApply 5ms 0.0039% 0.43% 39244ms 30.65% PCApply_BJacobi_Singleblock 1078ms 0.84% 1.27% 37275ms 29.11% AbstractBackwardEulerCardiacCell::ComputeExceptVoltage 4ms 0.0031% 1.27% 36941ms 28.85% KSPSolve_PREONLY (partial-inline) 1ms 0.00078% 1.27% 35800ms 27.96% PCApply_ICC 9ms 0.007% 1.28% 35799ms 27.96% MatSolve 35413ms 27.66% 28.94% 35790ms 27.95% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 7ms 0.0055% 28.94% 33743ms 26.35% KSP_PCApply.lto_priv.18 7724ms 6.03% 34.97% 32808ms 25.62% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeOneStepExceptVoltage 7ms 0.0055% 34.98% 22832ms 17.83% MatMult 512ms 0.4% 35.38% 22825ms 17.83% MatMult_SeqAIJ (partial-inline) 22086ms 17.25% 52.63% 22604ms 17.65% MatMult_SeqAIJ_Inode (inline) 2197ms 1.72% 54.34% 16713ms 13.05% CardiacNewtonSolver::Solve 5468ms 4.27% 58.61% 10003ms 7.81% CellLuoRudy1991FromCellMLBackwardEulerOpt::ComputeResidual 1509ms 1.18% 59.79% 9951ms 7.77% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::IndexTable0 (inline) 215ms 0.17% 59.96% 9025ms 7.05% AbstractCardiacTissue::UpdateCaches (inline) 1663ms 1.30% 61.26% 8463ms 6.61% CellLuoRudy1991FromCellMLBackwardEulerOpt::GetIIonic 8142ms 6.36% 67.62% 8142ms 6.36% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::_lookup_0_row (inline) 1136ms 0.89% 68.50% 8035ms 6.28% BidomainSolver::SetupLinearSystem 1ms 0.00078% 68.50% 7446ms 5.82% KSP_PCApply (partial-inline) 5ms 0.0039% 68.51% 6894ms 5.38% KSPConvergedDefault 4246ms 3.32% 71.82% 4359ms 3.40% __ieee754_log_fma 0 0% 71.82% 4068ms 3.18% boost::numeric::ublas::norm_inf (inline) 2828ms 2.21% 74.03% 4068ms 3.18% boost::numeric::ublas::vector_norm_inf::apply (inline) 0 0% 74.03% 4068ms 3.18% boost::numeric::ublas::vector_scalar_unary::evaluate (inline) 0 0% 74.03% 4068ms 3.18% boost::numeric::ublas::vector_scalar_unary::operator double (inline) 38ms 0.03% 74.06% 3261ms 2.55% std::pow (inline) 3249ms 2.54% 76.60% 3249ms 2.54% ddot_ 14ms 0.011% 76.61% 3210ms 2.51% MatNullSpaceRemove 399ms 0.31% 76.92% 3206ms 2.50% __pow 2077ms 1.62% 78.54% 3195ms 2.50% CellLuoRudy1991FromCellMLBackwardEulerOpt::VerifyStateVariables 3060ms 2.39% 80.93% 3060ms 2.39% __memcpy_avx_unaligned_erms 0 0% 80.93% 3010ms 2.35% PetscMemcpy (inline) 365ms 0.29% 81.22% 2775ms 2.17% __ieee754_pow_fma 12ms 0.0094% 81.23% 2739ms 2.14% VecDot 2ms 0.0016% 81.23% 2727ms 2.13% VecDot_Seq 2ms 0.0016% 81.23% 2725ms 2.13% VecXDot_Seq_Private.constprop.0 21ms 0.016% 81.25% 2675ms 2.09% VecCopy 1ms 0.00078% 81.25% 2648ms 2.07% VecCopy_Seq (partial-inline) 22ms 0.017% 81.27% 2277ms 1.78% VecAXPY 3ms 0.0023% 81.27% 2255ms 1.76% VecAXPY_Seq 2236ms 1.75% 83.01% 2236ms 1.75% daxpy_ 1ms 0.00078% 83.02% 2001ms 1.56% AbstractFeVolumeIntegralAssembler::DoAssemble 4ms 0.0031% 83.02% 1993ms 1.56% VecMDot 12ms 0.0094% 83.03% 1989ms 1.55% VecMXDot_Private 1960ms 1.53% 84.56% 1969ms 1.54% VecMDot_Seq 26ms 0.02% 84.58% 1659ms 1.30% AbstractFeVolumeIntegralAssembler::AssembleOnElement 1592ms 1.24% 85.82% 1652ms 1.29% exp_inline (inline) 0 0% 85.82% 1377ms 1.08% AbstractFeAssemblerInterface::AssembleMatrix (inline) 0 0% 85.82% 1231ms 0.96% boost::numeric::ublas::scalar_traits::norm_inf (inline) 0 0% 85.82% 1231ms 0.96% boost::numeric::ublas::scalar_traits::type_abs (inline) 0 0% 85.82% 1231ms 0.96% boost_numeric_ublas_abs (inline) 1231ms 0.96% 86.78% 1231ms 0.96% std::abs (inline) 11ms 0.0086% 86.79% 1203ms 0.94% VecMAXPY 1187ms 0.93% 87.72% 1192ms 0.93% VecMAXPY_Seq 2ms 0.0016% 87.72% 1104ms 0.86% boost::numeric::ublas::matrix_assign (inline) 250ms 0.2% 87.92% 1090ms 0.85% boost::numeric::ublas::indexing_matrix_assign 724ms 0.57% 88.48% 1063ms 0.83% CellLuoRudy1991FromCellMLBackwardEulerOpt_LookupTables::Instance 0 0% 88.48% 1036ms 0.81% AbstractTetrahedralMesh::ConstructRegularSlabMesh 0 0% 88.48% 1036ms 0.81% CuboidMeshConstructor::Construct 2ms 0.0016% 88.48% 1036ms 0.81% DistributedTetrahedralMesh::ConstructCuboid 961ms 0.75% 89.23% 961ms 0.75% [libchaste_heart.so] 2ms 0.0016% 89.24% 921ms 0.72% Element::Element 888ms 0.69% 89.93% 888ms 0.69% __memset_avx2_unaligned_erms 2ms 0.0016% 89.93% 882ms 0.69% AbstractTetrahedralElement::CalculateJacobian 8ms 0.0062% 89.94% 878ms 0.69% BidomainAssembler::ComputeMatrixTerm 0 0% 89.94% 876ms 0.68% PetscMemzero (inline) 8ms 0.0062% 89.94% 870ms 0.68% VecScale 3ms 0.0023% 89.95% 865ms 0.68% VecNorm 2ms 0.0016% 89.95% 862ms 0.67% VecScale_Seq 9ms 0.007% 89.95% 857ms 0.67% boost::numeric::ublas::c_matrix::c_matrix (inline) 3ms 0.0023% 89.96% 853ms 0.67% VecNorm_Seq 853ms 0.67% 90.62% 853ms 0.67% dscal_ 3ms 0.0023% 90.62% 840ms 0.66% AbstractTetrahedralElement::AbstractTetrahedralElement 0 0% 90.62% 791ms 0.62% AbstractBidomainSolver::FinaliseLinearSystem 225ms 0.18% 90.80% 790ms 0.62% AbstractBidomainSolver::CheckCompatibilityCondition 1ms 0.00078% 90.80% 784ms 0.61% BidomainProblem::WriteOneStep 4ms 0.0031% 90.80% 756ms 0.59% VecDuplicate 719ms 0.56% 91.37% 719ms 0.56% log_inline (inline)