File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 374ms, 84.62% of 442ms total Dropped 192 nodes (cum <= 2.21ms) flat flat% sum% cum cum% 0 0% 0% 435ms 98.42% __libc_start_call_main 0 0% 0% 435ms 98.42% __libc_start_main_impl 0 0% 0% 435ms 98.42% _start 0 0% 0% 432ms 97.74% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 432ms 97.74% CxxTest::TestRunner::runAllTests 0 0% 0% 432ms 97.74% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 432ms 97.74% main 0 0% 0% 397ms 89.82% CxxTest::RealTestDescription::run 0 0% 0% 397ms 89.82% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 397ms 89.82% CxxTest::TestRunner::runTest (inline) 0 0% 0% 397ms 89.82% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 397ms 89.82% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 393ms 88.91% AbstractCardiacProblem::Solve 0 0% 0% 393ms 88.91% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 352ms 79.64% LinearSystem::Solve 0 0% 0% 350ms 79.19% KSPSolve 0 0% 0% 350ms 79.19% KSPSolve_CG 0 0% 0% 350ms 79.19% KSPSolve_Private 0 0% 0% 217ms 49.10% KSP_PCApply.lto_priv.7 0 0% 0% 212ms 47.96% PCApply 0 0% 0% 211ms 47.74% PCApply_BJacobi_Singleblock 0 0% 0% 183ms 41.40% KSPSolve_PREONLY (partial-inline) 2ms 0.45% 0.45% 169ms 38.24% MatSolve 0 0% 0.45% 169ms 38.24% PCApply_ICC 167ms 37.78% 38.24% 167ms 37.78% MatSolve_SeqSBAIJ_1_NaturalOrdering 0 0% 38.24% 67ms 15.16% MatMult 0 0% 38.24% 67ms 15.16% MatMult_SeqAIJ 67ms 15.16% 53.39% 67ms 15.16% MatMult_SeqAIJ_Inode (inline) 44ms 9.95% 63.35% 44ms 9.95% ddot_ 0 0% 63.35% 37ms 8.37% AbstractCardiacTissue::SolveCellSystems 0 0% 63.35% 31ms 7.01% CxxTest::RealWorldDescription::setUp 0 0% 63.35% 31ms 7.01% PetscInitialize 0 0% 63.35% 31ms 7.01% PetscSetup::setUpWorld 0 0% 63.35% 31ms 7.01% PetscSetupUtils::CommonSetup 0 0% 63.35% 31ms 7.01% PetscSetupUtils::InitialisePetsc 0 0% 63.35% 31ms 7.01% VecTDot 0 0% 63.35% 31ms 7.01% VecTDot_Seq 0 0% 63.35% 31ms 7.01% VecXDot_Seq_Private.constprop.0 0 0% 63.35% 30ms 6.79% PMPI_Init_thread 0 0% 63.35% 30ms 6.79% ompi_mpi_init 0 0% 63.35% 28ms 6.33% MatNullSpaceRemove 1ms 0.23% 63.57% 22ms 4.98% 0 0% 63.57% 22ms 4.98% VecMDot 2ms 0.45% 64.03% 22ms 4.98% VecMXDot_Private 1ms 0.23% 64.25% 21ms 4.75% AbstractCardiacCell::ComputeExceptVoltage 0 0% 64.25% 21ms 4.75% orte_init 19ms 4.30% 68.55% 20ms 4.52% VecMDot_Seq 1ms 0.23% 68.78% 19ms 4.30% AbstractOneStepIvpOdeSolver::InternalSolve 1ms 0.23% 69.00% 18ms 4.07% EulerIvpOdeSolver::CalculateNextYValue 0 0% 69.00% 18ms 4.07% KSP_PCApply (partial-inline) 3ms 0.68% 69.68% 17ms 3.85% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 69.68% 13ms 2.94% VecNorm 0 0% 69.68% 13ms 2.94% VecNorm_Seq 7ms 1.58% 71.27% 13ms 2.94% __GI___exp 0 0% 71.27% 13ms 2.94% __GI__dl_catch_exception 0 0% 71.27% 13ms 2.94% _dl_catch_error 0 0% 71.27% 13ms 2.94% _dlerror_run 0 0% 71.27% 12ms 2.71% hwloc_topology_load 0 0% 71.27% 12ms 2.71% opal_stackframe_output 0 0% 71.27% 11ms 2.49% AbstractCardiacTissue::UpdateCaches (inline) 2ms 0.45% 71.72% 11ms 2.49% CellLuoRudy1991FromCellML::GetIIonic 0 0% 71.72% 11ms 2.49% hwloc_linux_get_tid_last_cpu_location 1ms 0.23% 71.95% 10ms 2.26% VecDuplicate 0 0% 71.95% 10ms 2.26% ___dlopen 0 0% 71.95% 10ms 2.26% _dl_open 0 0% 71.95% 10ms 2.26% dlopen_doit 0 0% 71.95% 10ms 2.26% dlopen_implementation (inline) 0 0% 71.95% 10ms 2.26% mca_base_framework_open 0 0% 71.95% 9ms 2.04% VecAXPY 0 0% 71.95% 9ms 2.04% VecAXPY_Seq 0 0% 71.95% 9ms 2.04% dl_open_worker 1ms 0.23% 72.17% 9ms 2.04% dl_open_worker_begin 0 0% 72.17% 9ms 2.04% mca_base_component_find 0 0% 72.17% 9ms 2.04% mca_base_component_repository_open 0 0% 72.17% 9ms 2.04% mca_base_framework_components_register 0 0% 72.17% 9ms 2.04% mca_base_framework_register 0 0% 72.17% 8ms 1.81% VecDuplicate_Seq 0 0% 72.17% 8ms 1.81% __ieee754_pow_fma 0 0% 72.17% 8ms 1.81% __pow 0 0% 72.17% 8ms 1.81% std::pow (inline) 0 0% 72.17% 7ms 1.58% _dl_init 0 0% 72.17% 7ms 1.58% _dl_start_user 0 0% 72.17% 7ms 1.58% call_init (inline) 7ms 1.58% 73.76% 7ms 1.58% daxpy_ 0 0% 73.76% 6ms 1.36% KSPConvergedDefault 1ms 0.23% 73.98% 6ms 1.36% VecAYPX 0 0% 73.98% 6ms 1.36% VecCreate 0 0% 73.98% 6ms 1.36% VecDestroy 0 0% 73.98% 6ms 1.36% VecMAXPY 6ms 1.36% 75.34% 6ms 1.36% VecMAXPY_Seq 2ms 0.45% 75.79% 6ms 1.36% __GI___libc_malloc 6ms 1.36% 77.15% 6ms 1.36% __ieee754_exp_fma 0 0% 77.15% 6ms 1.36% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 77.15% 6ms 1.36% boost::serialization::singleton::get_instance (partial-inline) 3ms 0.68% 77.83% 5ms 1.13% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 77.83% 5ms 1.13% PetscHeaderCreate_Private 5ms 1.13% 78.96% 5ms 1.13% VecAYPX_Seq 0 0% 78.96% 5ms 1.13% _dl_map_object 2ms 0.45% 79.41% 5ms 1.13% _int_malloc 5ms 1.13% 80.54% 5ms 1.13% log_inline (inline) 0 0% 80.54% 5ms 1.13% opal_hwloc_base_get_topology 0 0% 80.54% 5ms 1.13% orte_ess_base_proc_binding 0 0% 80.54% 4ms 0.9% AbstractCardiacProblem::Initialise 2ms 0.45% 81.00% 4ms 0.9% BidomainSolver::SetupLinearSystem 0 0% 81.00% 4ms 0.9% CxxTest::RealWorldDescription::tearDown 1ms 0.23% 81.22% 4ms 0.9% MPI_Comm_set_attr 0 0% 81.22% 4ms 0.9% PetscFinalize 1ms 0.23% 81.45% 4ms 0.9% PetscHeaderDestroy_Private 0 0% 81.45% 4ms 0.9% PetscMallocA 1ms 0.23% 81.67% 4ms 0.9% PetscMallocAlign 0 0% 81.67% 4ms 0.9% PetscOptionsFindPair 0 0% 81.67% 4ms 0.9% PetscSetup::tearDownWorld 0 0% 81.67% 4ms 0.9% PetscSetupUtils::CommonFinalize 4ms 0.9% 82.58% 4ms 0.9% __GI___libc_read 2ms 0.45% 83.03% 4ms 0.9% __cxa_finalize 4ms 0.9% 83.94% 4ms 0.9% __memcpy_avx_unaligned_erms 0 0% 83.94% 4ms 0.9% _dl_call_fini 0 0% 83.94% 4ms 0.9% _dl_map_object_from_fd 0 0% 83.94% 4ms 0.9% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 83.94% 4ms 0.9% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 0 0% 83.94% 4ms 0.9% ompi_mpi_finalize 0 0% 83.94% 3ms 0.68% DistributedTetrahedralMesh::ConstructFromMeshReader 1ms 0.23% 84.16% 3ms 0.68% PMPI_Comm_get_attr 0 0% 84.16% 3ms 0.68% PetscMemcpy (inline) 0 0% 84.16% 3ms 0.68% PetscOptionsGetViewer 0 0% 84.16% 3ms 0.68% VecCopy 0 0% 84.16% 3ms 0.68% VecCopy_Seq (partial-inline) 1ms 0.23% 84.39% 3ms 0.68% VecCreate_Seq 0 0% 84.39% 3ms 0.68% VecSetType 0 0% 84.39% 3ms 0.68% XOpenDisplay 0 0% 84.39% 3ms 0.68% [hwloc_gl.so] 0 0% 84.39% 3ms 0.68% [libxcb.so.1.1.0] 0 0% 84.39% 3ms 0.68% _XConnectXCB 0 0% 84.39% 3ms 0.68% __GI_exit 0 0% 84.39% 3ms 0.68% __dlclose 0 0% 84.39% 3ms 0.68% __run_exit_handlers 0 0% 84.39% 3ms 0.68% _dl_close 1ms 0.23% 84.62% 3ms 0.68% _dl_close_worker (inline) 0 0% 84.62% 3ms 0.68% _dl_fini 0 0% 84.62% 3ms 0.68% _dl_lookup_symbol_x 0 0% 84.62% 3ms 0.68% kh_get_HO (inline) 0 0% 84.62% 3ms 0.68% mca_base_component_repository_release 0 0% 84.62% 3ms 0.68% mca_base_components_close 0 0% 84.62% 3ms 0.68% ompi_attr_set_c 0 0% 84.62% 3ms 0.68% xcb_connect_to_display_with_auth_info