File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12691ms, 85.02% of 14927ms total Dropped 728 nodes (cum <= 74.64ms) flat flat% sum% cum cum% 0 0% 0% 14916ms 99.93% __libc_start_call_main 0 0% 0% 14916ms 99.93% __libc_start_main_impl 0 0% 0% 14916ms 99.93% _start 0 0% 0% 14914ms 99.91% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14914ms 99.91% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14914ms 99.91% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14914ms 99.91% main 0 0% 0% 14876ms 99.66% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14876ms 99.66% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14876ms 99.66% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0067% 0.0067% 14853ms 99.50% AbstractCardiacProblem::Solve 4ms 0.027% 0.033% 11386ms 76.28% AbstractDynamicLinearPdeSolver::Solve 34ms 0.23% 0.26% 9139ms 61.22% AbstractCardiacTissue::SolveCellSystems 135ms 0.9% 1.17% 5547ms 37.16% AbstractCardiacCell::ComputeExceptVoltage 176ms 1.18% 2.34% 4782ms 32.04% AbstractOneStepIvpOdeSolver::InternalSolve 191ms 1.28% 3.62% 4077ms 27.31% EulerIvpOdeSolver::CalculateNextYValue 898ms 6.02% 9.64% 3829ms 25.65% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1678ms 11.24% 20.88% 3518ms 23.57% __GI___exp 3ms 0.02% 20.90% 3408ms 22.83% MonodomainProblem::WriteOneStep 3ms 0.02% 20.92% 3276ms 21.95% Hdf5DataWriter::PutVector 2ms 0.013% 20.94% 3244ms 21.73% H5Dwrite 6ms 0.04% 20.98% 3215ms 21.54% H5D__write 110ms 0.74% 21.71% 2694ms 18.05% AbstractCardiacTissue::UpdateCaches (inline) 823ms 5.51% 27.23% 2551ms 17.09% CellLuoRudy1991FromCellML::GetIIonic 0 0% 27.23% 1860ms 12.46% H5D__chunk_collective_write 17ms 0.11% 27.34% 1860ms 12.46% H5F_set_coll_metadata_reads 1665ms 11.15% 38.49% 1786ms 11.96% __ieee754_exp_fma 15ms 0.1% 38.59% 1633ms 10.94% H5FD_s3comms_uriencode 2ms 0.013% 38.61% 1468ms 9.83% LinearSystem::Solve 0 0% 38.61% 1307ms 8.76% KSPSolve 6ms 0.04% 38.65% 1307ms 8.76% KSPSolve_Private 6ms 0.04% 38.69% 1290ms 8.64% KSPSolve_CG 6ms 0.04% 38.73% 1245ms 8.34% H5D__chunk_cacheable 1ms 0.0067% 38.74% 1215ms 8.14% H5F_block_write 1ms 0.0067% 38.74% 1214ms 8.13% H5PB_write 40ms 0.27% 39.01% 1213ms 8.13% 2ms 0.013% 39.02% 1213ms 8.13% H5FD_write 0 0% 39.02% 1213ms 8.13% H5F__accum_write 4ms 0.027% 39.05% 1131ms 7.58% H5D__mpio_select_write 443ms 2.97% 42.02% 1094ms 7.33% H5S_select_iterate 0 0% 42.02% 1022ms 6.85% PMPI_File_write_at_all 996ms 6.67% 48.69% 1001ms 6.71% __GI_pwritev64 3ms 0.02% 48.71% 899ms 6.02% std::pow (inline) 93ms 0.62% 49.33% 896ms 6.00% __pow 116ms 0.78% 50.11% 801ms 5.37% __ieee754_pow_fma 319ms 2.14% 52.25% 757ms 5.07% MonodomainSolver::SetupLinearSystem 359ms 2.41% 54.65% 727ms 4.87% CellLuoRudy1991FromCellML::VerifyStateVariables 70ms 0.47% 55.12% 671ms 4.50% H5D__chunk_set_sizes 3ms 0.02% 55.14% 661ms 4.43% PCApply 2ms 0.013% 55.16% 656ms 4.39% PCApply_BJacobi_Singleblock 5ms 0.033% 55.19% 621ms 4.16% MatMult 614ms 4.11% 59.30% 616ms 4.13% MatMult_SeqAIJ 1ms 0.0067% 59.31% 610ms 4.09% KSPSolve_PREONLY 1ms 0.0067% 59.32% 606ms 4.06% PCApply_ICC 1ms 0.0067% 59.32% 605ms 4.05% MatSolve 595ms 3.99% 63.31% 604ms 4.05% MatSolve_SeqSBAIJ_1_NaturalOrdering 45ms 0.3% 63.61% 502ms 3.36% H5S_mpio_space_type 1ms 0.0067% 63.62% 483ms 3.24% KSP_PCApply.lto_priv.7 372ms 2.49% 66.11% 372ms 2.49% log_inline (inline) 280ms 1.88% 67.98% 280ms 1.88% exp_inline (inline) 129ms 0.86% 68.85% 251ms 1.68% TimeStepper::TimeStepper 52ms 0.35% 69.20% 244ms 1.63% __GI___libc_malloc 3ms 0.02% 69.22% 243ms 1.63% KSPConvergedDefault 187ms 1.25% 70.47% 229ms 1.53% _int_malloc 22ms 0.15% 70.62% 224ms 1.50% H5VM_chunk_index 9ms 0.06% 70.68% 198ms 1.33% ompi_datatype_create 182ms 1.22% 71.90% 182ms 1.22% std::isinf (inline) 0 0% 71.90% 180ms 1.21% KSP_PCApply 9ms 0.06% 71.96% 179ms 1.20% MPI_Type_free 91ms 0.61% 72.57% 177ms 1.19% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 6ms 0.04% 72.61% 175ms 1.17% ompi_datatype_destroy 172ms 1.15% 73.76% 172ms 1.15% [libchaste_heart.so] 146ms 0.98% 74.74% 168ms 1.13% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 8ms 0.054% 74.79% 158ms 1.06% ompi_info_register_framework_params 51ms 0.34% 75.13% 157ms 1.05% ompi_datatype_release_args 25ms 0.17% 75.30% 156ms 1.05% AbstractCardiacCell::SetVoltage (partial-inline) 91ms 0.61% 75.91% 152ms 1.02% top12 (inline) 31ms 0.21% 76.12% 151ms 1.01% __GI___libc_free 29ms 0.19% 76.31% 149ms 1% H5S_set_version 98ms 0.66% 76.97% 139ms 0.93% AbstractOneStepIvpOdeSolver::Solve 131ms 0.88% 77.85% 131ms 0.88% ddot_ 130ms 0.87% 78.72% 130ms 0.87% TimeStepper::CalculateNextTime 2ms 0.013% 78.73% 129ms 0.86% Hdf5DataWriter::PutUnlimitedVariable 2ms 0.013% 78.74% 128ms 0.86% VecDuplicate 1ms 0.0067% 78.75% 126ms 0.84% VecDuplicate_MPI 121ms 0.81% 79.56% 121ms 0.81% __ieee754_log_fma 56ms 0.38% 79.94% 120ms 0.8% H5VM_array_calc 2ms 0.013% 79.95% 120ms 0.8% PMPI_Type_create_resized 48ms 0.32% 80.27% 120ms 0.8% _int_free 6ms 0.04% 80.31% 120ms 0.8% ompi_datatype_duplicate 0 0% 80.31% 118ms 0.79% PMPI_File_set_view 102ms 0.68% 80.99% 114ms 0.76% AbstractParameterisedSystem::SetAnyVariable 64ms 0.43% 81.42% 107ms 0.72% H5S_hyper_add_span_element 45ms 0.3% 81.72% 107ms 0.72% std::__cxx11::basic_string::basic_string 105ms 0.7% 82.43% 105ms 0.7% __memcpy_avx_unaligned_erms 102ms 0.68% 83.11% 102ms 0.68% H5VM_chunk_index_scaled 101ms 0.68% 83.79% 101ms 0.68% H5VM_array_offset_pre 24ms 0.16% 83.95% 92ms 0.62% __libc_calloc 3ms 0.02% 83.97% 91ms 0.61% opal_datatype_create_desc 4ms 0.027% 84.00% 89ms 0.6% VecNorm 2ms 0.013% 84.01% 84ms 0.56% VecTDot 68ms 0.46% 84.46% 81ms 0.54% AbstractParameterisedSystem::GetAnyVariable 0 0% 84.46% 81ms 0.54% VecTDot_Seq 1ms 0.0067% 84.47% 81ms 0.54% VecXDot_Seq_Private.constprop.0 2ms 0.013% 84.48% 79ms 0.53% PetscMallocA 1ms 0.0067% 84.49% 78ms 0.52% MPI_Type_create_hindexed 46ms 0.31% 84.80% 77ms 0.52% AbstractCardiacCell::GetVoltage (partial-inline) 3ms 0.02% 84.82% 77ms 0.52% PetscMallocAlign 1ms 0.0067% 84.83% 77ms 0.52% VecNorm_Seq 24ms 0.16% 84.99% 77ms 0.52% ompi_datatype_set_args 5ms 0.033% 85.02% 76ms 0.51% PMPI_Type_vector