File: Test1dBidomainProblemForEfficiency Type: cpu Showing nodes accounting for 378ms, 86.10% of 439ms total Dropped 193 nodes (cum <= 2.19ms) flat flat% sum% cum cum% 0 0% 0% 432ms 98.41% __libc_start_call_main 0 0% 0% 432ms 98.41% __libc_start_main_impl 0 0% 0% 432ms 98.41% _start 0 0% 0% 429ms 97.72% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 429ms 97.72% CxxTest::TestRunner::runAllTests 0 0% 0% 429ms 97.72% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 429ms 97.72% main 0 0% 0% 394ms 89.75% CxxTest::RealTestDescription::run 0 0% 0% 394ms 89.75% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 394ms 89.75% CxxTest::TestRunner::runTest (inline) 0 0% 0% 394ms 89.75% Test1dBidomainProblemForEfficiency::TestBidomainDg01WithNoOutput 0 0% 0% 394ms 89.75% TestDescription_Test1dBidomainProblemForEfficiency_TestBidomainDg01WithNoOutput::runTest (inline) 0 0% 0% 390ms 88.84% AbstractCardiacProblem::Solve 0 0% 0% 387ms 88.15% AbstractDynamicLinearPdeSolver::Solve 0 0% 0% 349ms 79.50% KSPSolve 0 0% 0% 349ms 79.50% KSPSolve_Private 0 0% 0% 349ms 79.50% LinearSystem::Solve 0 0% 0% 348ms 79.27% KSPSolve_CG 0 0% 0% 198ms 45.10% KSP_PCApply.lto_priv.7 0 0% 0% 190ms 43.28% PCApply 0 0% 0% 190ms 43.28% PCApply_BJacobi_Singleblock 0 0% 0% 165ms 37.59% KSPSolve_PREONLY (partial-inline) 0 0% 0% 152ms 34.62% MatSolve 151ms 34.40% 34.40% 152ms 34.62% MatSolve_SeqSBAIJ_1_NaturalOrdering (partial-inline) 0 0% 34.40% 152ms 34.62% PCApply_ICC 1ms 0.23% 34.62% 64ms 14.58% MatMult 2ms 0.46% 35.08% 63ms 14.35% MatMult_SeqAIJ (partial-inline) 61ms 13.90% 48.97% 63ms 14.35% MatMult_SeqAIJ_Inode (inline) 57ms 12.98% 61.96% 57ms 12.98% ddot_ 0 0% 61.96% 41ms 9.34% VecTDot 0 0% 61.96% 41ms 9.34% VecTDot_Seq 0 0% 61.96% 41ms 9.34% VecXDot_Seq_Private.constprop.0 0 0% 61.96% 32ms 7.29% CxxTest::RealWorldDescription::setUp 0 0% 61.96% 32ms 7.29% PMPI_Init_thread 0 0% 61.96% 32ms 7.29% PetscInitialize 0 0% 61.96% 32ms 7.29% PetscSetup::setUpWorld 0 0% 61.96% 32ms 7.29% PetscSetupUtils::CommonSetup 0 0% 61.96% 32ms 7.29% PetscSetupUtils::InitialisePetsc 0 0% 61.96% 32ms 7.29% ompi_mpi_init 0 0% 61.96% 30ms 6.83% MatNullSpaceRemove 0 0% 61.96% 27ms 6.15% AbstractCardiacTissue::SolveCellSystems 0 0% 61.96% 24ms 5.47% 0 0% 61.96% 23ms 5.24% orte_init 0 0% 61.96% 19ms 4.33% VecMDot 2ms 0.46% 62.41% 19ms 4.33% VecMXDot_Private 1ms 0.23% 62.64% 18ms 4.10% VecNorm 17ms 3.87% 66.51% 17ms 3.87% VecMDot_Seq 0 0% 66.51% 16ms 3.64% KSP_PCApply (partial-inline) 0 0% 66.51% 16ms 3.64% VecNorm_Seq 0 0% 66.51% 15ms 3.42% AbstractCardiacCell::ComputeExceptVoltage 0 0% 66.51% 15ms 3.42% AbstractOneStepIvpOdeSolver::InternalSolve 0 0% 66.51% 14ms 3.19% hwloc_topology_load 0 0% 66.51% 13ms 2.96% VecAYPX 13ms 2.96% 69.48% 13ms 2.96% VecAYPX_Seq 0 0% 69.48% 13ms 2.96% __GI__dl_catch_exception 0 0% 69.48% 13ms 2.96% _dl_catch_error 0 0% 69.48% 13ms 2.96% _dlerror_run 0 0% 69.48% 13ms 2.96% hwloc_linux_get_tid_last_cpu_location 1ms 0.23% 69.70% 12ms 2.73% CellLuoRudy1991FromCellML::EvaluateYDerivatives 0 0% 69.70% 12ms 2.73% EulerIvpOdeSolver::CalculateNextYValue 5ms 1.14% 70.84% 12ms 2.73% __GI___exp 0 0% 70.84% 12ms 2.73% opal_stackframe_output 0 0% 70.84% 11ms 2.51% VecMAXPY 9ms 2.05% 72.89% 11ms 2.51% VecMAXPY_Seq 1ms 0.23% 73.12% 10ms 2.28% AbstractCardiacTissue::UpdateCaches (inline) 0 0% 73.12% 10ms 2.28% ___dlopen 0 0% 73.12% 10ms 2.28% _dl_open 0 0% 73.12% 10ms 2.28% dl_open_worker 0 0% 73.12% 10ms 2.28% dl_open_worker_begin 0 0% 73.12% 10ms 2.28% dlopen_doit 0 0% 73.12% 10ms 2.28% dlopen_implementation (inline) 0 0% 73.12% 10ms 2.28% mca_base_framework_components_register 0 0% 73.12% 10ms 2.28% mca_base_framework_open 0 0% 73.12% 10ms 2.28% mca_base_framework_register 2ms 0.46% 73.58% 9ms 2.05% BidomainSolver::SetupLinearSystem 6ms 1.37% 74.94% 9ms 2.05% CellLuoRudy1991FromCellML::GetIIonic 0 0% 74.94% 9ms 2.05% VecAXPY 0 0% 74.94% 9ms 2.05% VecAXPY_Seq 9ms 2.05% 76.99% 9ms 2.05% daxpy_ 0 0% 76.99% 9ms 2.05% mca_base_component_find 0 0% 76.99% 9ms 2.05% mca_base_component_repository_open 0 0% 76.99% 8ms 1.82% VecDuplicate 0 0% 76.99% 8ms 1.82% VecDuplicate_Seq 0 0% 76.99% 7ms 1.59% VecCreate 6ms 1.37% 78.36% 7ms 1.59% __ieee754_exp_fma 0 0% 78.36% 7ms 1.59% _dl_init 0 0% 78.36% 7ms 1.59% _dl_map_object 0 0% 78.36% 7ms 1.59% _dl_start_user 0 0% 78.36% 7ms 1.59% call_init (inline) 0 0% 78.36% 6ms 1.37% boost::serialization::detail::singleton_wrapper::singleton_wrapper (inline) 0 0% 78.36% 6ms 1.37% boost::serialization::singleton::get_instance 0 0% 78.36% 6ms 1.37% opal_hwloc_base_get_topology 0 0% 78.36% 6ms 1.37% orte_ess_base_proc_binding 0 0% 78.36% 5ms 1.14% PetscMallocA 0 0% 78.36% 5ms 1.14% PetscMallocAlign (partial-inline) 5ms 1.14% 79.50% 5ms 1.14% __memset_avx2_unaligned_erms 1ms 0.23% 79.73% 4ms 0.91% KSPConvergedDefault 0 0% 79.73% 4ms 0.91% PetscMemcpy (inline) 0 0% 79.73% 4ms 0.91% PetscMemzero (inline) 0 0% 79.73% 4ms 0.91% VecCopy 0 0% 79.73% 4ms 0.91% VecCopy_Seq (partial-inline) 4ms 0.91% 80.64% 4ms 0.91% __libc_openat64 4ms 0.91% 81.55% 4ms 0.91% __memcpy_avx_unaligned_erms 2ms 0.46% 82.00% 4ms 0.91% _int_malloc 0 0% 82.00% 4ms 0.91% boost::serialization::void_cast_detail::void_caster::recursive_register 0 0% 82.00% 4ms 0.91% boost::serialization::void_cast_detail::void_caster_primitive::void_caster_primitive (inline) 4ms 0.91% 82.92% 4ms 0.91% strcmp 0 0% 82.92% 3ms 0.68% AbstractCardiacProblem::Initialise 0 0% 82.92% 3ms 0.68% AbstractFeVolumeIntegralAssembler::DoAssemble 0 0% 82.92% 3ms 0.68% CxxTest::RealWorldDescription::tearDown 0 0% 82.92% 3ms 0.68% DistributedTetrahedralMesh::ConstructFromMeshReader 0 0% 82.92% 3ms 0.68% PetscFinalize 2ms 0.46% 83.37% 3ms 0.68% PetscLogObjCreateDefault 1ms 0.23% 83.60% 3ms 0.68% PetscObjectComposeFunction_Petsc 0 0% 83.60% 3ms 0.68% PetscObjectComposeFunction_Private 0 0% 83.60% 3ms 0.68% PetscSetup::tearDownWorld 0 0% 83.60% 3ms 0.68% PetscSetupUtils::CommonFinalize 0 0% 83.60% 3ms 0.68% VecDestroy 3ms 0.68% 84.28% 3ms 0.68% VecRestoreArray 0 0% 84.28% 3ms 0.68% XOpenDisplay 0 0% 84.28% 3ms 0.68% [hwloc_gl.so] 3ms 0.68% 84.97% 3ms 0.68% [libchaste_heart.so] 0 0% 84.97% 3ms 0.68% [libxcb.so.1.1.0] 0 0% 84.97% 3ms 0.68% _XConnectXCB 0 0% 84.97% 3ms 0.68% __GI_exit 1ms 0.23% 85.19% 3ms 0.68% __cxa_finalize 0 0% 85.19% 3ms 0.68% __dlclose 1ms 0.23% 85.42% 3ms 0.68% __libc_calloc 1ms 0.23% 85.65% 3ms 0.68% __posix_memalign 0 0% 85.65% 3ms 0.68% __run_exit_handlers 0 0% 85.65% 3ms 0.68% _dl_call_fini 0 0% 85.65% 3ms 0.68% _dl_close 0 0% 85.65% 3ms 0.68% _dl_close_worker (inline) 0 0% 85.65% 3ms 0.68% _dl_fini 0 0% 85.65% 3ms 0.68% _dl_map_object_deps 2ms 0.46% 86.10% 3ms 0.68% _dl_runtime_resolve_xsavec 0 0% 86.10% 3ms 0.68% mca_base_component_repository_release 0 0% 86.10% 3ms 0.68% ompi_mpi_finalize 0 0% 86.10% 3ms 0.68% openaux 0 0% 86.10% 3ms 0.68% xcb_connect_to_display_with_auth_info