File: TestMonodomainSlabLong Type: cpu Showing nodes accounting for 12613ms, 85.09% of 14823ms total Dropped 768 nodes (cum <= 74.11ms) flat flat% sum% cum cum% 0 0% 0% 14815ms 99.95% __libc_start_call_main 0 0% 0% 14815ms 99.95% __libc_start_main_impl 0 0% 0% 14815ms 99.95% _start 0 0% 0% 14812ms 99.93% CxxTest::ErrorFormatter::run (inline) 0 0% 0% 14812ms 99.93% CxxTest::TestRunner::runAllTests (inline) 0 0% 0% 14812ms 99.93% CxxTest::TestRunner::runWorld (inline) 0 0% 0% 14812ms 99.93% main 0 0% 0% 14778ms 99.70% CxxTest::TestRunner::runSuite (inline) 0 0% 0% 14778ms 99.70% CxxTest::TestRunner::runTest (inline) 0 0% 0% 14778ms 99.70% TestMonodomainSlabLong::TestMonodomainSlabLongWithCornerNodesStimulated 1ms 0.0067% 0.0067% 14756ms 99.55% AbstractCardiacProblem::Solve 0 0% 0.0067% 11474ms 77.41% AbstractDynamicLinearPdeSolver::Solve 42ms 0.28% 0.29% 9171ms 61.87% AbstractCardiacTissue::SolveCellSystems 113ms 0.76% 1.05% 5701ms 38.46% AbstractCardiacCell::ComputeExceptVoltage 167ms 1.13% 2.18% 4959ms 33.45% AbstractOneStepIvpOdeSolver::InternalSolve 169ms 1.14% 3.32% 4205ms 28.37% EulerIvpOdeSolver::CalculateNextYValue 882ms 5.95% 9.27% 3980ms 26.85% CellLuoRudy1991FromCellML::EvaluateYDerivatives 1801ms 12.15% 21.42% 3675ms 24.79% __GI___exp 0 0% 21.42% 3231ms 21.80% MonodomainProblem::WriteOneStep 1ms 0.0067% 21.43% 3089ms 20.84% Hdf5DataWriter::PutVector 1ms 0.0067% 21.43% 3062ms 20.66% H5Dwrite 5ms 0.034% 21.47% 3034ms 20.47% H5D__write 84ms 0.57% 22.03% 2591ms 17.48% AbstractCardiacTissue::UpdateCaches (inline) 748ms 5.05% 27.08% 2468ms 16.65% CellLuoRudy1991FromCellML::GetIIonic 1684ms 11.36% 38.44% 1810ms 12.21% __ieee754_exp_fma 13ms 0.088% 38.53% 1780ms 12.01% H5F_set_coll_metadata_reads 0 0% 38.53% 1779ms 12.00% H5D__chunk_collective_write 15ms 0.1% 38.63% 1598ms 10.78% H5FD_s3comms_uriencode 0 0% 38.63% 1522ms 10.27% LinearSystem::Solve 0 0% 38.63% 1380ms 9.31% KSPSolve 3ms 0.02% 38.65% 1380ms 9.31% KSPSolve_Private 3ms 0.02% 38.67% 1369ms 9.24% KSPSolve_CG 68ms 0.46% 39.13% 1257ms 8.48% 3ms 0.02% 39.15% 1253ms 8.45% H5F_block_write 1ms 0.0067% 39.16% 1250ms 8.43% H5PB_write 2ms 0.013% 39.17% 1249ms 8.43% H5F__accum_write 1ms 0.0067% 39.18% 1247ms 8.41% H5FD_write 1ms 0.0067% 39.18% 1157ms 7.81% H5D__mpio_select_write 7ms 0.047% 39.23% 1134ms 7.65% H5D__chunk_cacheable 0 0% 39.23% 1057ms 7.13% PMPI_File_write_at_all 1025ms 6.91% 46.14% 1029ms 6.94% __GI_pwritev64 404ms 2.73% 48.87% 985ms 6.65% H5S_select_iterate 9ms 0.061% 48.93% 896ms 6.04% std::pow (inline) 88ms 0.59% 49.52% 887ms 5.98% __pow 112ms 0.76% 50.28% 795ms 5.36% __ieee754_pow_fma 335ms 2.26% 52.54% 764ms 5.15% MonodomainSolver::SetupLinearSystem 0 0% 52.54% 728ms 4.91% PCApply 0 0% 52.54% 724ms 4.88% PCApply_BJacobi_Singleblock 359ms 2.42% 54.96% 695ms 4.69% CellLuoRudy1991FromCellML::VerifyStateVariables 0 0% 54.96% 690ms 4.65% KSPSolve_PREONLY 3ms 0.02% 54.98% 687ms 4.63% MatSolve 0 0% 54.98% 687ms 4.63% PCApply_ICC 675ms 4.55% 59.54% 684ms 4.61% MatSolve_SeqSBAIJ_1_NaturalOrdering 4ms 0.027% 59.56% 634ms 4.28% MatMult 629ms 4.24% 63.81% 630ms 4.25% MatMult_SeqAIJ 66ms 0.45% 64.25% 592ms 3.99% H5D__chunk_set_sizes 1ms 0.0067% 64.26% 520ms 3.51% KSP_PCApply.lto_priv.7 53ms 0.36% 64.62% 438ms 2.95% H5S_mpio_space_type 372ms 2.51% 67.13% 372ms 2.51% log_inline (inline) 133ms 0.9% 68.02% 283ms 1.91% TimeStepper::TimeStepper 267ms 1.80% 69.82% 279ms 1.88% exp_inline (inline) 2ms 0.013% 69.84% 268ms 1.81% KSPConvergedDefault 0 0% 69.84% 210ms 1.42% KSP_PCApply 34ms 0.23% 70.07% 190ms 1.28% __GI___libc_malloc 132ms 0.89% 70.96% 181ms 1.22% _int_malloc 161ms 1.09% 72.04% 178ms 1.20% AbstractIvpOdeSolver::SolveAndUpdateStateVariable 17ms 0.11% 72.16% 178ms 1.20% H5VM_chunk_index 173ms 1.17% 73.33% 173ms 1.17% [libchaste_heart.so] 110ms 0.74% 74.07% 169ms 1.14% top12 (inline) 167ms 1.13% 75.19% 167ms 1.13% TimeStepper::CalculateNextTime 27ms 0.18% 75.38% 162ms 1.09% AbstractCardiacCell::SetVoltage (partial-inline) 83ms 0.56% 75.94% 158ms 1.07% AbstractCardiacCellInterface::SetVoltageDerivativeToZero 126ms 0.85% 76.79% 158ms 1.07% AbstractOneStepIvpOdeSolver::Solve 12ms 0.081% 76.87% 158ms 1.07% ompi_datatype_create 150ms 1.01% 77.88% 150ms 1.01% std::isinf (inline) 145ms 0.98% 78.86% 145ms 0.98% ddot_ 0 0% 78.86% 142ms 0.96% Hdf5DataWriter::PutUnlimitedVariable 33ms 0.22% 79.08% 139ms 0.94% __GI___libc_free 11ms 0.074% 79.15% 132ms 0.89% ompi_datatype_destroy 4ms 0.027% 79.18% 128ms 0.86% MPI_Type_free 1ms 0.0067% 79.19% 119ms 0.8% PMPI_File_set_view 44ms 0.3% 79.48% 115ms 0.78% std::__cxx11::basic_string::basic_string 100ms 0.67% 80.16% 114ms 0.77% AbstractParameterisedSystem::SetAnyVariable 114ms 0.77% 80.93% 114ms 0.77% __ieee754_log_fma 113ms 0.76% 81.69% 113ms 0.76% __memcpy_avx_unaligned_erms 18ms 0.12% 81.81% 111ms 0.75% H5S_set_version 6ms 0.04% 81.85% 108ms 0.73% ompi_info_register_framework_params 0 0% 81.85% 107ms 0.72% VecDuplicate 2ms 0.013% 81.87% 107ms 0.72% VecDuplicate_MPI 26ms 0.18% 82.04% 107ms 0.72% ompi_datatype_release_args 40ms 0.27% 82.31% 105ms 0.71% _int_free 45ms 0.3% 82.61% 100ms 0.67% H5S_hyper_add_span_element 5ms 0.034% 82.65% 96ms 0.65% VecNorm 2ms 0.013% 82.66% 94ms 0.63% VecTDot 39ms 0.26% 82.93% 93ms 0.63% H5VM_array_calc 42ms 0.28% 83.21% 92ms 0.62% H5S_select_iter_next 0 0% 83.21% 92ms 0.62% VecTDot_Seq 0 0% 83.21% 92ms 0.62% VecXDot_Seq_Private.constprop.0 43ms 0.29% 83.50% 90ms 0.61% TimeStepper::AdvanceOneTimeStep 70ms 0.47% 83.97% 88ms 0.59% AbstractParameterisedSystem::GetAnyVariable 88ms 0.59% 84.56% 88ms 0.59% H5VM_chunk_index_scaled 2ms 0.013% 84.58% 88ms 0.59% PMPI_Type_create_resized 1ms 0.0067% 84.58% 85ms 0.57% VecNorm_Seq 2ms 0.013% 84.60% 82ms 0.55% ompi_datatype_duplicate 32ms 0.22% 84.81% 80ms 0.54% H5S__hyper_rebuild 37ms 0.25% 85.06% 79ms 0.53% AbstractCardiacCell::GetVoltage (partial-inline) 2ms 0.013% 85.08% 78ms 0.53% H5D__chunk_allocated 0 0% 85.08% 75ms 0.51% H5D__select_write 2ms 0.013% 85.09% 75ms 0.51% H5Dgather